RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TMEM60Q9H2L4 133 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 JRKLQ9Y4A0 524 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 IL6STP40189 918 aaPredicted RBP26.35■■□□□ 1.81
TSKU-201ENST00000333090 MATR3P43243 847 aaKnown RBP eCLIP26.35■■□□□ 1.81
TSKU-201ENST00000333090 MTIF2P46199 727 aaKnown RBP26.35■■□□□ 1.81
TSKU-201ENST00000333090 SPA17Q15506 151 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 RETREG2Q8NC44 543 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 RRP36Q96EU6 259 aaKnown RBP26.35■■□□□ 1.81
TSKU-201ENST00000333090 CNOT6LQ96LI5 555 aaKnown RBP26.35■■□□□ 1.81
TSKU-201ENST00000333090 ITGB4P16144 1822 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 FGRP09769 529 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 IRAK1P51617 712 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 CREG2Q8IUH2 290 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 EHD4Q9H223 541 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 DMGDHQ9UI17 866 aaKnown RBP26.34■■□□□ 1.81
TSKU-201ENST00000333090 ZNF263O14978 683 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 PLEKP08567 350 aaPredicted RBP26.34■■□□□ 1.81
TSKU-201ENST00000333090 FNBP4Q8N3X1 1017 aaPredicted RBP26.34■■□□□ 1.81
TSKU-201ENST00000333090 LRRC1Q9BTT6 524 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 NOC4LQ9BVI4 516 aaKnown RBP26.34■■□□□ 1.81
TSKU-201ENST00000333090 SNX12Q9UMY4 172 aa26.34■■□□□ 1.81
TSKU-201ENST00000333090 GTF2A1P52655 376 aaPredicted RBP26.33■■□□□ 1.81
TSKU-201ENST00000333090 TADA2BQ86TJ2 420 aa26.33■■□□□ 1.81
TSKU-201ENST00000333090 NOC3LQ8WTT2 800 aaKnown RBP26.33■■□□□ 1.81
TSKU-201ENST00000333090 PSMB7Q99436 277 aa26.33■■□□□ 1.81
TSKU-201ENST00000333090 KBTBD4Q9NVX7 518 aa26.33■■□□□ 1.81
TSKU-201ENST00000333090 CAPN6Q9Y6Q1 641 aa26.33■■□□□ 1.81
TSKU-201ENST00000333090 CCDC194A0A1B0GVG4 234 aa26.33■■□□□ 1.81
TSKU-201ENST00000333090 PCP11498 1178 aaKnown RBP26.33■■□□□ 1.81
TSKU-201ENST00000333090 PDE4CQ08493 712 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 AMOTL1Q8IY63 956 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 MICALL1Q8N3F8 863 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 TRIM58Q8NG06 486 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 DHTKD1Q96HY7 919 aaPredicted RBP26.32■■□□□ 1.8
TSKU-201ENST00000333090 TSGA10Q9BZW7 698 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 SLC7A5Q01650 507 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 CCDC178Q5BJE1 867 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 ANKRD40Q6AI12 368 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 LRRC15Q8TF66 581 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 P2RX5Q93086 422 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 PCDHA4Q9UN74 947 aa26.32■■□□□ 1.8
TSKU-201ENST00000333090 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.32■■□□□ 1.8
TSKU-201ENST00000333090 CICQ96RK0 1608 aaPredicted RBP26.31■■□□□ 1.8
TSKU-201ENST00000333090 ZNF384Q8TF68 577 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 CAPS2Q9BXY5 557 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 IFIH1Q9BYX4 1025 aaKnown RBP26.31■■□□□ 1.8
TSKU-201ENST00000333090 MLXIPQ9HAP2 919 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 TSPY2A6NKD2 308 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 NKRFO15226 690 aaKnown RBP eCLIP26.31■■□□□ 1.8
TSKU-201ENST00000333090 TACC1O75410 805 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 ATP6V1AP38606 617 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 PDE4DQ08499 809 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 PPFIA1Q13136 1202 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 TYW1BQ6NUM6 668 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 GPIHBP1Q8IV16 184 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 MMGT1Q8N4V1 131 aa26.31■■□□□ 1.8
TSKU-201ENST00000333090 A0A087WUV0 522 aaPredicted RBP26.3■■□□□ 1.8
TSKU-201ENST00000333090 USO1O60763 962 aaKnown RBP26.3■■□□□ 1.8
TSKU-201ENST00000333090 INF2Q27J81 1249 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 SLC4A8Q2Y0W8 1093 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 INTS5Q6P9B9 1019 aaKnown RBP26.3■■□□□ 1.8
TSKU-201ENST00000333090 SPATA4Q8NEY3 305 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 BCAS4Q8TDM0 211 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 EBAG9O00559 213 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 MYL1P05976 194 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 CCNE1P24864 410 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 CXCR5P32302 372 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 KIF5BP33176 963 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 TTC19Q6DKK2 380 aaPredicted RBP26.3■■□□□ 1.8
TSKU-201ENST00000333090 SMARCAL1Q9NZC9 954 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 ZNF804BA4D1E1 1349 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 COL1A1P02452 1464 aaPredicted RBP26.3■■□□□ 1.8
TSKU-201ENST00000333090 MOCS3O95396 460 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 STK4Q13043 487 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 MIIPQ5JXC2 388 aa26.3■■□□□ 1.8
TSKU-201ENST00000333090 BICDL2A1A5D9 508 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 CYP2D6P10635 497 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 CRKLP46109 303 aaKnown RBP26.29■■□□□ 1.8
TSKU-201ENST00000333090 C2CD5Q86YS7 1000 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 ORC4O43929 436 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 GNGT1P63211 74 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 FKBP15Q5T1M5 1219 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 NFRKBQ6P4R8 1299 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 FAM114A1Q8IWE2 563 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 FAM107BQ9H098 131 aa26.29■■□□□ 1.8
TSKU-201ENST00000333090 FCER1AP12319 257 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 ITPK1Q13572 414 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 ANKRD18AQ8IVF6 992 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 CCSER1Q9C0I3 900 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 SH2D4AQ9H788 454 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 EHD2Q9NZN4 543 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 PCDHA13Q9Y5I0 950 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 PLCG1P19174 1290 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 LIG3P49916 1009 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 ASIC1P78348 528 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 DEF6Q9H4E7 631 aa26.28■■□□□ 1.8
TSKU-201ENST00000333090 CDK17Q00537 523 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 CCDC181Q5TID7 509 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 STAG2Q8N3U4 1231 aa26.27■■□□□ 1.8
TSKU-201ENST00000333090 CCDC47Q96A33 483 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms