RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CUL5Q93034 780 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 TTC12Q9H892 705 aaPredicted RBP19.22■□□□□ 0.67
DDX41-201ENST00000330503 PSTPIP2Q9H939 334 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 TMX2Q9Y320 296 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 NEMFO60524 1076 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 OR52Z1P0C646 297 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 RPS12P25398 132 aaKnown RBP19.22■□□□□ 0.67
DDX41-201ENST00000330503 MSNP26038 577 aaKnown RBP19.22■□□□□ 0.67
DDX41-201ENST00000330503 MMP14P50281 582 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 ORC2Q13416 577 aaPredicted RBP19.22■□□□□ 0.67
DDX41-201ENST00000330503 SYDE2Q5VT97 1194 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 TRIML1Q8N9V2 468 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 NLGN2Q8NFZ4 835 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 STAMQ92783 540 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 MRFAP1L1Q96HT8 127 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 PCDHA1Q9Y5I3 950 aa19.22■□□□□ 0.67
DDX41-201ENST00000330503 FZD9O00144 591 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 SMC2O95347 1197 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 KARSQ15046 597 aaKnown RBP19.21■□□□□ 0.67
DDX41-201ENST00000330503 MTMR9Q96QG7 549 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 PYM1Q9BRP8 204 aaKnown RBP19.21■□□□□ 0.67
DDX41-201ENST00000330503 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.21■□□□□ 0.67
DDX41-201ENST00000330503 NRBP1Q9UHY1 535 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 CAP2P40123 477 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 GMPSP49915 693 aaPredicted RBP19.21■□□□□ 0.67
DDX41-201ENST00000330503 RASA3Q14644 834 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 SPICE1Q8N0Z3 855 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 MLKLQ8NB16 471 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 CCDC34Q96HJ3 373 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 CCSER1Q9C0I3 900 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 ARHGEF10LQ9HCE6 1279 aa19.21■□□□□ 0.67
DDX41-201ENST00000330503 NAALADL2Q58DX5 795 aa19.2■□□□□ 0.66
DDX41-201ENST00000330503 TEPSINQ96N21 525 aa19.2■□□□□ 0.66
DDX41-201ENST00000330503 KCNF1Q9H3M0 494 aa19.2■□□□□ 0.66
DDX41-201ENST00000330503 SLC37A4O43826 429 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 ZNF500O60304 480 aaPredicted RBP19.19■□□□□ 0.66
DDX41-201ENST00000330503 TDP2O95551 362 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 TNNI2P48788 182 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 MYL5Q02045 173 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 DRC7Q8IY82 874 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 DPF2Q92785 391 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 MED15Q96RN5 788 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 DISC1Q9NRI5 854 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L15C9J2P7 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L13C9JLJ4 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L11C9JVI0 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L18D6R9N7 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L22D6RA61 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L17D6RBQ6 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L19D6RCP7 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L20D6RJB6 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 TXLNAP40222 546 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 FMR1Q06787 632 aaKnown RBP eCLIP19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L24Q0WX57 530 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 SAMD7Q7Z3H4 446 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 LRRC15Q8TF66 581 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 AK8Q96MA6 479 aa19.19■□□□□ 0.66
DDX41-201ENST00000330503 PHF20L1A8MW92 1017 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 GOLGA6L6A8MZA4 724 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 UBA7P41226 1012 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 CCDC186Q7Z3E2 898 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 MICALL2Q8IY33 904 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 GSDMAQ96QA5 445 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 AMNQ9BXJ7 453 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 BLZF1Q9H2G9 400 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 CNOT7Q9UIV1 285 aaKnown RBP19.18■□□□□ 0.66
DDX41-201ENST00000330503 PRR12Q9ULL5 1215 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 GJA3Q9Y6H8 435 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 ASTN2O75129 1339 aaPredicted RBP19.18■□□□□ 0.66
DDX41-201ENST00000330503 GTPBP6O43824 516 aaPredicted RBP19.18■□□□□ 0.66
DDX41-201ENST00000330503 TPM3P06753 285 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 PTGS1P23219 599 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 LMOD1P29536 600 aaPredicted RBP19.18■□□□□ 0.66
DDX41-201ENST00000330503 TECP42680 631 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
DDX41-201ENST00000330503 CUL4BQ13620 913 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 CCDC144BQ3MJ40 725 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 RRAGBQ5VZM2 374 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 PPP4R3AQ6IN85 833 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 FBXO11Q86XK2 927 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 GLT8D2Q9H1C3 349 aa19.18■□□□□ 0.66
DDX41-201ENST00000330503 MEIS2O14770 477 aa19.17■□□□□ 0.66
DDX41-201ENST00000330503 ATP1A3P13637 1013 aa19.17■□□□□ 0.66
DDX41-201ENST00000330503 STAT6P42226 847 aa19.17■□□□□ 0.66
DDX41-201ENST00000330503 IGSF22Q8N9C0 903 aa19.17■□□□□ 0.66
DDX41-201ENST00000330503 P2RX7Q99572 595 aaKnown RBP19.17■□□□□ 0.66
DDX41-201ENST00000330503 CD44P16070 742 aaKnown RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 TAL1P17542 331 aaPredicted RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 TPM4P67936 248 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 CALCRLQ16602 461 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 TBC1D10BQ4KMP7 808 aaPredicted RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 FAM83BQ5T0W9 1011 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 CABP7Q86V35 215 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 PLIN2Q99541 437 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 MMTAG2Q9BU76 263 aaKnown RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 GLIS2Q9BZE0 524 aaPredicted RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 GOPCQ9HD26 462 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 FANCLQ9NW38 375 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms