RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ADD3Q9UEY8 706 aaKnown RBP20.83■□□□□ 0.93
TPM1-203ENST00000317516 B4E1Z4 1266 aa20.82■□□□□ 0.92
TPM1-203ENST00000317516 C6orf222P0C671 652 aaPredicted RBP20.82■□□□□ 0.92
TPM1-203ENST00000317516 CST5P28325 142 aaPredicted RBP20.82■□□□□ 0.92
TPM1-203ENST00000317516 TLE2Q04725 743 aa20.82■□□□□ 0.92
TPM1-203ENST00000317516 GPR153Q6NV75 609 aa20.82■□□□□ 0.92
TPM1-203ENST00000317516 NOL8Q76FK4 1167 aaKnown RBP20.82■□□□□ 0.92
TPM1-203ENST00000317516 ANKS1AQ92625 1134 aa20.82■□□□□ 0.92
TPM1-203ENST00000317516 GLT1D1Q96MS3 346 aa20.82■□□□□ 0.92
TPM1-203ENST00000317516 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
TPM1-203ENST00000317516 ZSWIM5Q9P217 1185 aa20.82■□□□□ 0.92
TPM1-203ENST00000317516 RAD50Q92878 1312 aa20.81■□□□□ 0.92
TPM1-203ENST00000317516 GSPT1P15170 499 aaKnown RBP20.81■□□□□ 0.92
TPM1-203ENST00000317516 GJA9P57773 515 aa20.81■□□□□ 0.92
TPM1-203ENST00000317516 TNFAIP2Q03169 654 aa20.81■□□□□ 0.92
TPM1-203ENST00000317516 GNASQ5JWF2 1037 aa20.81■□□□□ 0.92
TPM1-203ENST00000317516 PNMA1Q8ND90 353 aa20.81■□□□□ 0.92
TPM1-203ENST00000317516 UBAC1Q9BSL1 405 aa20.81■□□□□ 0.92
TPM1-203ENST00000317516 LOC102724159A0A0B4J2E5 919 aa20.8■□□□□ 0.92
TPM1-203ENST00000317516 SOX1O00570 391 aaPredicted RBP20.8■□□□□ 0.92
TPM1-203ENST00000317516 TRDNQ13061 729 aa20.8■□□□□ 0.92
TPM1-203ENST00000317516 BAATQ14032 418 aaPredicted RBP20.8■□□□□ 0.92
TPM1-203ENST00000317516 PWP2Q15269 919 aaKnown RBP20.8■□□□□ 0.92
TPM1-203ENST00000317516 IQSEC1Q6DN90 963 aa20.8■□□□□ 0.92
TPM1-203ENST00000317516 CCSAPQ6IQ19 270 aaPredicted RBP20.8■□□□□ 0.92
TPM1-203ENST00000317516 VTI1AQ96AJ9 217 aa20.8■□□□□ 0.92
TPM1-203ENST00000317516 LRCH3Q96II8 777 aa20.8■□□□□ 0.92
TPM1-203ENST00000317516 TOX2Q96NM4 488 aa20.8■□□□□ 0.92
TPM1-203ENST00000317516 KATNBL1Q9H079 304 aa20.8■□□□□ 0.92
TPM1-203ENST00000317516 UPF3AQ9H1J1 476 aaKnown RBP20.8■□□□□ 0.92
TPM1-203ENST00000317516 ELP1O95163 1332 aa20.79■□□□□ 0.92
TPM1-203ENST00000317516 PTPDC1A2A3K4 754 aa20.79■□□□□ 0.92
TPM1-203ENST00000317516 DCDC2CA8MYV0 355 aa20.79■□□□□ 0.92
TPM1-203ENST00000317516 CLTBP09497 229 aa20.79■□□□□ 0.92
TPM1-203ENST00000317516 MPHOSPH6Q99547 160 aaKnown RBP20.79■□□□□ 0.92
TPM1-203ENST00000317516 AP5M1Q9H0R1 490 aa20.79■□□□□ 0.92
TPM1-203ENST00000317516 PDLIM7Q9NR12 457 aa20.79■□□□□ 0.92
TPM1-203ENST00000317516 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 FRMPD3Q5JV73 1810 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 PQBP1O60828 265 aaKnown RBP20.78■□□□□ 0.92
TPM1-203ENST00000317516 ASGR1P07306 291 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 GOLGA8HP0CJ92 632 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 ASPRV1Q53RT3 343 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 RNF207Q6ZRF8 634 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 ANKRD33Q7Z3H0 272 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 ENAHQ8N8S7 591 aaPredicted RBP20.78■□□□□ 0.92
TPM1-203ENST00000317516 VTA1Q9NP79 307 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 U3KPZ7 1027 aaPredicted RBP20.78■□□□□ 0.92
TPM1-203ENST00000317516 SMCHD1A6NHR9 2005 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 TNKSO95271 1327 aa20.78■□□□□ 0.92
TPM1-203ENST00000317516 B4DLN1 442 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 NFIBO00712 420 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 ZEB2O60315 1214 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 CHMLP26374 656 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 MRPL12P52815 198 aaKnown RBP20.77■□□□□ 0.92
TPM1-203ENST00000317516 NKX3-2P78367 333 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 MORC4Q8TE76 937 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 BADQ92934 168 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 MAF1Q9H063 256 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 TMEM39AQ9NV64 488 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 Q9Y3F1 56 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 PLXNA1Q9UIW2 1896 aa20.77■□□□□ 0.92
TPM1-203ENST00000317516 MROH7Q68CQ1 1323 aa20.77■□□□□ 0.91
TPM1-203ENST00000317516 TRIM43BA6NCK2 446 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 MYADML2A6NDP7 307 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 ADCY6O43306 1168 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 PARP1P09874 1014 aaKnown RBP20.76■□□□□ 0.91
TPM1-203ENST00000317516 RAG1P15918 1043 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 CALML3P27482 149 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 IFIT1BQ5T764 474 aaKnown RBP20.76■□□□□ 0.91
TPM1-203ENST00000317516 KIAA1211Q6ZU35 1233 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 EEPD1Q7L9B9 569 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 SH3RF1Q7Z6J0 888 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 CLEC4DQ8WXI8 215 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 TRIM43Q96BQ3 446 aaPredicted RBP20.76■□□□□ 0.91
TPM1-203ENST00000317516 IL25Q9H293 177 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 GNEQ9Y223 722 aaKnown RBP20.76■□□□□ 0.91
TPM1-203ENST00000317516 ASTN1O14525 1302 aa20.76■□□□□ 0.91
TPM1-203ENST00000317516 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
TPM1-203ENST00000317516 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.75■□□□□ 0.91
TPM1-203ENST00000317516 KIAA0355O15063 1070 aa20.75■□□□□ 0.91
TPM1-203ENST00000317516 DYNC1LI2O43237 492 aaPredicted RBP20.75■□□□□ 0.91
TPM1-203ENST00000317516 CABYRO75952 493 aa20.75■□□□□ 0.91
TPM1-203ENST00000317516 ALDH5A1P51649 535 aaPredicted RBP20.75■□□□□ 0.91
TPM1-203ENST00000317516 TAPT1Q6NXT6 567 aa20.75■□□□□ 0.91
TPM1-203ENST00000317516 TLK2Q86UE8 772 aa20.75■□□□□ 0.91
TPM1-203ENST00000317516 RGS22Q8NE09 1264 aa20.75■□□□□ 0.91
TPM1-203ENST00000317516 DNERQ8NFT8 737 aa20.75■□□□□ 0.91
TPM1-203ENST00000317516 PURBQ96QR8 312 aaKnown RBP20.75■□□□□ 0.91
TPM1-203ENST00000317516 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
TPM1-203ENST00000317516 SMPD1P17405 629 aa20.74■□□□□ 0.91
TPM1-203ENST00000317516 RPS6P62753 249 aaKnown RBP20.74■□□□□ 0.91
TPM1-203ENST00000317516 FSCN1Q16658 493 aaKnown RBP20.74■□□□□ 0.91
TPM1-203ENST00000317516 USH1GQ495M9 461 aa20.74■□□□□ 0.91
TPM1-203ENST00000317516 FBXO16Q8IX29 292 aaPredicted RBP20.74■□□□□ 0.91
TPM1-203ENST00000317516 ADGRF4Q8IZF3 695 aa20.74■□□□□ 0.91
TPM1-203ENST00000317516 PDGFCQ9NRA1 345 aa20.74■□□□□ 0.91
TPM1-203ENST00000317516 ERICH2A1L162 156 aa20.73■□□□□ 0.91
TPM1-203ENST00000317516 ARVCFO00192 962 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms