RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 FAM133AQ8N9E0 248 aa14.87□□□□□ -0.03
CKS2-201ENST00000314355 ZKSCAN3Q9BRR0 538 aa14.87□□□□□ -0.03
CKS2-201ENST00000314355 TMEM39AQ9NV64 488 aa14.87□□□□□ -0.03
CKS2-201ENST00000314355 CYP39A1Q9NYL5 469 aa14.87□□□□□ -0.03
CKS2-201ENST00000314355 LOC102724159A0A0B4J2E5 919 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 A0A1W2PQ45 241 aaPredicted RBP14.86□□□□□ -0.03
CKS2-201ENST00000314355 A0A1W2PQY0 241 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 ERICH2A1L162 156 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 TLR3O15455 904 aaKnown RBP14.86□□□□□ -0.03
CKS2-201ENST00000314355 PQBP1O60828 265 aaKnown RBP14.86□□□□□ -0.03
CKS2-201ENST00000314355 ADAMTS4O75173 837 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 GJA9P57773 515 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 ZNF543Q08ER8 600 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 SNX17Q15036 470 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 PWP2Q15269 919 aaKnown RBP14.86□□□□□ -0.03
CKS2-201ENST00000314355 RNF207Q6ZRF8 634 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 PNMA1Q8ND90 353 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 TOX2Q96NM4 488 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 ZSCAN10Q96SZ4 725 aaPredicted RBP14.86□□□□□ -0.03
CKS2-201ENST00000314355 ELP1O95163 1332 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 SYNRGQ9UMZ2 1314 aa14.86□□□□□ -0.03
CKS2-201ENST00000314355 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 B4E1Z4 1266 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 CABYRO75952 493 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 ASGR1P07306 291 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 BAATQ14032 418 aaPredicted RBP14.85□□□□□ -0.03
CKS2-201ENST00000314355 BRDTQ58F21 947 aaPredicted RBP14.85□□□□□ -0.03
CKS2-201ENST00000314355 MUM1L1Q5H9M0 696 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 TTC22Q5TAA0 569 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 KIAA1211Q6ZU35 1233 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 TBC1D10CQ8IV04 446 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 KLHDC9Q8NEP7 349 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 BADQ92934 168 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 LRCH3Q96II8 777 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 SEZ6LQ9BYH1 1024 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 VTA1Q9NP79 307 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
CKS2-201ENST00000314355 RAD50Q92878 1312 aa14.85□□□□□ -0.03
CKS2-201ENST00000314355 PLXNA1Q9UIW2 1896 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 ALPK3Q96L96 1907 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 A0A0U1RQG5 324 aaPredicted RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 SOWAHBA6NEL2 793 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 DYNC1LI2O43237 492 aaPredicted RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 PARP1P09874 1014 aaKnown RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 CALML3P27482 149 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 CST5P28325 142 aaPredicted RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 IRX6P78412 446 aaPredicted RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 IFIT1BQ5T764 474 aaKnown RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 EEPD1Q7L9B9 569 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 MCF2L2Q86YR7 1114 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 LENG1Q96BZ8 264 aaPredicted RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 GPHNQ9NQX3 736 aaPredicted RBP14.84□□□□□ -0.03
CKS2-201ENST00000314355 ZSWIM5Q9P217 1185 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 Q9Y3F1 56 aa14.84□□□□□ -0.03
CKS2-201ENST00000314355 PDE4DQ08499 809 aa14.83□□□□□ -0.04
CKS2-201ENST00000314355 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
CKS2-201ENST00000314355 ASPRV1Q53RT3 343 aa14.83□□□□□ -0.04
CKS2-201ENST00000314355 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
CKS2-201ENST00000314355 DEFB123Q8N688 67 aa14.83□□□□□ -0.04
CKS2-201ENST00000314355 MAF1Q9H063 256 aa14.83□□□□□ -0.04
CKS2-201ENST00000314355 UPF3AQ9H1J1 476 aaKnown RBP14.83□□□□□ -0.04
CKS2-201ENST00000314355 PDLIM7Q9NR12 457 aa14.83□□□□□ -0.04
CKS2-201ENST00000314355 NEDD4P46934 1319 aa14.83□□□□□ -0.04
CKS2-201ENST00000314355 WDR19Q8NEZ3 1342 aa14.83□□□□□ -0.04
CKS2-201ENST00000314355 ARVCFO00192 962 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
CKS2-201ENST00000314355 GOLGA8HP0CJ92 632 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 SNHG28P0DPA3 235 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 ALDH5A1P51649 535 aaPredicted RBP14.82□□□□□ -0.04
CKS2-201ENST00000314355 TRAF1Q13077 416 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 USH1GQ495M9 461 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 ANKRD33Q7Z3H0 272 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 TLK2Q86UE8 772 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 DNERQ8NFT8 737 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 ANKS1AQ92625 1134 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 FGD4Q96M96 766 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 UBA5Q9GZZ9 404 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 VAT1LQ9HCJ6 419 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 TNKSO95271 1327 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 FRMPD3Q5JV73 1810 aa14.82□□□□□ -0.04
CKS2-201ENST00000314355 TRIM43BA6NCK2 446 aa14.81□□□□□ -0.04
CKS2-201ENST00000314355 FPGSQ05932 587 aa14.81□□□□□ -0.04
CKS2-201ENST00000314355 FSCN1Q16658 493 aaKnown RBP14.81□□□□□ -0.04
CKS2-201ENST00000314355 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
CKS2-201ENST00000314355 RGS22Q8NE09 1264 aa14.81□□□□□ -0.04
CKS2-201ENST00000314355 TRIM43Q96BQ3 446 aaPredicted RBP14.81□□□□□ -0.04
CKS2-201ENST00000314355 MRPL11Q9Y3B7 192 aaKnown RBP14.81□□□□□ -0.04
CKS2-201ENST00000314355 ABCB11O95342 1321 aa14.81□□□□□ -0.04
CKS2-201ENST00000314355 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.8□□□□□ -0.04
CKS2-201ENST00000314355 NFIBO00712 420 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 KIAA0355O15063 1070 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 NKRFO15226 690 aaKnown RBP eCLIP14.8□□□□□ -0.04
CKS2-201ENST00000314355 SMPD1P17405 629 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 CPT1AP50416 773 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 RPS6P62753 249 aaKnown RBP14.8□□□□□ -0.04
CKS2-201ENST00000314355 BEX3Q00994 111 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 SHHQ15465 462 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 CDC37Q16543 378 aaPredicted RBP14.8□□□□□ -0.04
CKS2-201ENST00000314355 CCSAPQ6IQ19 270 aaPredicted RBP14.8□□□□□ -0.04
CKS2-201ENST00000314355 SH3RF1Q7Z6J0 888 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms