RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ADKP55263 362 aaKnown RBP14.02□□□□□ -0.17
RNF4-201ENST00000314289 RRP1BQ14684 758 aaKnown RBP14.02□□□□□ -0.17
RNF4-201ENST00000314289 CEP135Q66GS9 1140 aa14.02□□□□□ -0.17
RNF4-201ENST00000314289 KRT25Q7Z3Z0 450 aa14.02□□□□□ -0.17
RNF4-201ENST00000314289 PPP1R1BQ9UD71 204 aaPredicted RBP14.02□□□□□ -0.17
RNF4-201ENST00000314289 DACH1Q9UI36 760 aa14.02□□□□□ -0.17
RNF4-201ENST00000314289 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L13C9JLJ4 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L11C9JVI0 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L18D6R9N7 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L22D6RA61 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L17D6RBQ6 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L19D6RCP7 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L20D6RJB6 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 OR52Z1P0C646 297 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 ZNF18P17022 549 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 NT5C2P49902 561 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 IKQ13123 557 aaPredicted RBP14.01□□□□□ -0.17
RNF4-201ENST00000314289 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 USP17L6PQ6QN14 398 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 TRIML1Q8N9V2 468 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 GSDMAQ96QA5 445 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 TNS1Q9HBL0 1735 aaKnown RBP14.01□□□□□ -0.17
RNF4-201ENST00000314289 PLCG1P19174 1290 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 GSDMDP57764 484 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 SIAH1Q8IUQ4 282 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 VSTM4Q8IW00 320 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 CPLX3Q8WVH0 158 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 CSRNP1Q96S65 589 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 PLIN4Q96Q06 1357 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 TRIM49BA6NDI0 452 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 POTEMA6NI47 508 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 EDIL3O43854 480 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 GH2P01242 217 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
RNF4-201ENST00000314289 DPEP1P16444 411 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 CCT6AP40227 531 aaKnown RBP14.01□□□□□ -0.17
RNF4-201ENST00000314289 LARGE2Q8N3Y3 721 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 HPS3Q969F9 1004 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 CGNQ9P2M7 1197 aaKnown RBP14.01□□□□□ -0.17
RNF4-201ENST00000314289 IMPACTQ9P2X3 320 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 MYH4Q9Y623 1939 aa14.01□□□□□ -0.17
RNF4-201ENST00000314289 ICA1Q05084 483 aa14□□□□□ -0.17
RNF4-201ENST00000314289 USH1GQ495M9 461 aa14□□□□□ -0.17
RNF4-201ENST00000314289 CABP7Q86V35 215 aa14□□□□□ -0.17
RNF4-201ENST00000314289 PAXBP1Q9Y5B6 917 aa14□□□□□ -0.17
RNF4-201ENST00000314289 PNMA6FA0A0J9YX94 578 aa14□□□□□ -0.17
RNF4-201ENST00000314289 CBFA2T2O43439 604 aa14□□□□□ -0.17
RNF4-201ENST00000314289 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
RNF4-201ENST00000314289 E4F1Q66K89 784 aaPredicted RBP14□□□□□ -0.17
RNF4-201ENST00000314289 SLFN13Q68D06 897 aa14□□□□□ -0.17
RNF4-201ENST00000314289 VEZTQ9HBM0 779 aa14□□□□□ -0.17
RNF4-201ENST00000314289 PSMD14O00487 310 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 PRCPP42785 496 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 SERPINA10Q9UK55 444 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 MORC2Q9Y6X9 1032 aaPredicted RBP13.99□□□□□ -0.17
RNF4-201ENST00000314289 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
RNF4-201ENST00000314289 ABCB5Q2M3G0 1257 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 QRICH1Q2TAL8 776 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 MIGA2Q7L4E1 593 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 CCAR2Q8N163 923 aaKnown RBP13.99□□□□□ -0.17
RNF4-201ENST00000314289 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 IDI2Q9BXS1 227 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 DHX36Q9H2U1 1008 aaKnown RBP13.99□□□□□ -0.17
RNF4-201ENST00000314289 ZBTB5O15062 677 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 ERCC5P28715 1186 aaPredicted RBP13.99□□□□□ -0.17
RNF4-201ENST00000314289 CALCRLQ16602 461 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 SPATA1Q5VX52 437 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
RNF4-201ENST00000314289 NUDT12Q9BQG2 462 aa13.99□□□□□ -0.17
RNF4-201ENST00000314289 ZNF215Q9UL58 517 aaPredicted RBP13.99□□□□□ -0.17
RNF4-201ENST00000314289 QSER1Q2KHR3 1735 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 SHTN1A0MZ66 631 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 F5H6K3 240 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 KCNA4P22459 653 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 ECE1P42892 770 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 PMS1P54277 932 aaKnown RBP13.98□□□□□ -0.17
RNF4-201ENST00000314289 KLRC3Q07444 240 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 KMT5BQ4FZB7 885 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 CCDC150Q8NCX0 1101 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 NELFBQ8WX92 580 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 EHD4Q9H223 541 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 PSTPIP2Q9H939 334 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 DDX41Q9UJV9 622 aaKnown RBP13.98□□□□□ -0.17
RNF4-201ENST00000314289 PCDHA1Q9Y5I3 950 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 PTPN14Q15678 1187 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 CCDC17Q96LX7 622 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 MMTAG2Q9BU76 263 aaKnown RBP13.98□□□□□ -0.17
RNF4-201ENST00000314289 VPS16Q9H269 839 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
RNF4-201ENST00000314289 A0A1W2PRG0 241 aa13.97□□□□□ -0.17
RNF4-201ENST00000314289 SMARCA1P28370 1054 aa13.97□□□□□ -0.17
RNF4-201ENST00000314289 CDC37Q16543 378 aaPredicted RBP13.97□□□□□ -0.17
RNF4-201ENST00000314289 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
RNF4-201ENST00000314289 KIF18AQ8NI77 898 aa13.97□□□□□ -0.17
RNF4-201ENST00000314289 SMCHD1A6NHR9 2005 aa13.97□□□□□ -0.17
RNF4-201ENST00000314289 SIPA1L1O43166 1804 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms