RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 ESYT2A0FGR8 921 aa21.53■■□□□ 1.04
CDK4-202ENST00000312990 OPLAHO14841 1288 aa21.53■■□□□ 1.04
CDK4-202ENST00000312990 SMCR8Q8TEV9 937 aaPredicted RBP21.53■■□□□ 1.04
CDK4-202ENST00000312990 PARK7Q99497 189 aaKnown RBP21.53■■□□□ 1.04
CDK4-202ENST00000312990 RIPK3Q9Y572 518 aa21.53■■□□□ 1.04
CDK4-202ENST00000312990 PLXNB2O15031 1838 aa21.52■■□□□ 1.04
CDK4-202ENST00000312990 WDR33Q9C0J8 1336 aaKnown RBP21.52■■□□□ 1.04
CDK4-202ENST00000312990 PDIA4P13667 645 aaKnown RBP21.52■■□□□ 1.04
CDK4-202ENST00000312990 NLRP5P59047 1200 aa21.52■■□□□ 1.04
CDK4-202ENST00000312990 SNRNP48Q6IEG0 339 aaKnown RBP21.52■■□□□ 1.04
CDK4-202ENST00000312990 PAGR1Q9BTK6 254 aa21.52■■□□□ 1.04
CDK4-202ENST00000312990 TEX13BQ9BXU2 312 aa21.52■■□□□ 1.04
CDK4-202ENST00000312990 CHMP5Q9NZZ3 219 aa21.52■■□□□ 1.04
CDK4-202ENST00000312990 ABCB11O95342 1321 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 ADGRA2Q96PE1 1338 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 MGAMO43451 1857 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 SMCO2A6NFE2 343 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 ZSCAN22P10073 491 aaPredicted RBP21.51■■□□□ 1.03
CDK4-202ENST00000312990 VEGFBP49765 207 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 NUCB2P80303 420 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 OXER1Q8TDS5 423 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 RABGAP1Q9Y3P9 1069 aa21.51■■□□□ 1.03
CDK4-202ENST00000312990 KIF28PB7ZC32 967 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 ALAS1P13196 640 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 STAT3P40763 770 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 TRAF1Q13077 416 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 PLS1Q14651 629 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 FOXD4L5Q5VV16 416 aaPredicted RBP21.5■■□□□ 1.03
CDK4-202ENST00000312990 FERMT3Q86UX7 667 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 DIS3L2Q8IYB7 885 aaKnown RBP21.5■■□□□ 1.03
CDK4-202ENST00000312990 DAGLBQ8NCG7 672 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 GTF3C2Q8WUA4 911 aaPredicted RBP21.5■■□□□ 1.03
CDK4-202ENST00000312990 FOXD4L4Q8WXT5 416 aaPredicted RBP21.5■■□□□ 1.03
CDK4-202ENST00000312990 SPATC1LQ9H0A9 340 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 PNMA2Q9UL42 364 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 PCDHA4Q9UN74 947 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 BTBD18B2RXH4 712 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 M0R2N6 131 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 CALML3P27482 149 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 C1QTNF8P60827 252 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 TAF1CQ15572 869 aaPredicted RBP21.5■■□□□ 1.03
CDK4-202ENST00000312990 Q3C1V9 767 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 CLEC4DQ8WXI8 215 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 C6orf50Q9HD87 102 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 RIC8AQ9NPQ8 531 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 HOMER2Q9NSB8 354 aa21.5■■□□□ 1.03
CDK4-202ENST00000312990 MRPL11Q9Y3B7 192 aaKnown RBP21.5■■□□□ 1.03
CDK4-202ENST00000312990 GNA11P29992 359 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 GCLCP48506 637 aaPredicted RBP21.49■■□□□ 1.03
CDK4-202ENST00000312990 ADCY7P51828 1080 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 ERVK-9P63128 1117 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 ERVK-24P63145 666 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 NR5A1Q13285 461 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 MCTP1Q6DN14 999 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 GALNT17Q6IS24 598 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 BLIDQ8IZY5 108 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 TRERF1Q96PN7 1200 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 PSTPIP2Q9H939 334 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 PLXNA1Q9UIW2 1896 aa21.49■■□□□ 1.03
CDK4-202ENST00000312990 NFIBO00712 420 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 F13A1P00488 732 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 HSPA6P17066 643 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 U2AF2P26368 475 aaKnown RBP eCLIP21.48■■□□□ 1.03
CDK4-202ENST00000312990 KRT2P35908 639 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 RESTQ13127 1097 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 SAFBQ15424 915 aaKnown RBP eCLIP21.48■■□□□ 1.03
CDK4-202ENST00000312990 RIOX2Q8IUF8 465 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 ANKRD13CQ8N6S4 541 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 RASGRP4Q8TDF6 673 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 CUL5Q93034 780 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 TNFRSF25Q93038 417 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 RNF146Q9NTX7 359 aa21.48■■□□□ 1.03
CDK4-202ENST00000312990 MEIS2O14770 477 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 TBC1D5Q92609 795 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 MOV10L1Q9BXT6 1211 aaKnown RBP21.47■■□□□ 1.03
CDK4-202ENST00000312990 FOXP1Q9H334 677 aaPredicted RBP21.47■■□□□ 1.03
CDK4-202ENST00000312990 R3HDMLQ9H3Y0 253 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 MORF4L1Q9UBU8 362 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 CLK2P49760 499 aaKnown RBP21.47■■□□□ 1.03
CDK4-202ENST00000312990 UBE2SQ16763 222 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 NOM1Q5C9Z4 860 aaKnown RBP21.47■■□□□ 1.03
CDK4-202ENST00000312990 USP17L6PQ6QN14 398 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 REM2Q8IYK8 340 aaPredicted RBP21.47■■□□□ 1.03
CDK4-202ENST00000312990 BRMS1Q9HCU9 246 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 PCDHA6Q9UN73 950 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 PCDHA8Q9Y5H6 950 aa21.47■■□□□ 1.03
CDK4-202ENST00000312990 MAP2K2P36507 400 aa21.46■■□□□ 1.03
CDK4-202ENST00000312990 MRPL12P52815 198 aaKnown RBP21.46■■□□□ 1.03
CDK4-202ENST00000312990 CRHR2Q13324 411 aa21.46■■□□□ 1.03
CDK4-202ENST00000312990 TKFCQ3LXA3 575 aa21.46■■□□□ 1.03
CDK4-202ENST00000312990 EARS2Q5JPH6 523 aaKnown RBP21.46■■□□□ 1.03
CDK4-202ENST00000312990 REXO1Q8N1G1 1221 aaKnown RBP21.46■■□□□ 1.03
CDK4-202ENST00000312990 BICD2Q8TD16 824 aa21.46■■□□□ 1.03
CDK4-202ENST00000312990 ZSWIM8A7E2V4 1837 aa21.45■■□□□ 1.02
CDK4-202ENST00000312990 PIK3CDO00329 1044 aa21.45■■□□□ 1.02
CDK4-202ENST00000312990 TLR2O60603 784 aa21.45■■□□□ 1.02
CDK4-202ENST00000312990 BCRP11274 1271 aa21.45■■□□□ 1.02
CDK4-202ENST00000312990 GHRHRQ02643 423 aa21.45■■□□□ 1.02
CDK4-202ENST00000312990 FAM110CQ1W6H9 321 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms