RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CRCPO75575 148 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 RXRAP19793 462 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 EPHX2P34913 555 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.97
VPS41-202ENST00000310301 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
VPS41-202ENST00000310301 PFDN4Q9NQP4 134 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 AGTPBP1Q9UPW5 1226 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 M0QZ92 97 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 ALDH1A1P00352 501 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 STMN1P16949 149 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 CTNNA1P35221 906 aaKnown RBP9.02□□□□□ -0.97
VPS41-202ENST00000310301 SATB1Q01826 763 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 PPP2R5AQ15172 486 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 AKNAD1Q5T1N1 836 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 TTC19Q6DKK2 380 aaPredicted RBP9.02□□□□□ -0.97
VPS41-202ENST00000310301 AGBL3Q8NEM8 1001 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 PLEKHF1Q96S99 279 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 ZFYVE28Q9HCC9 887 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 ASIC3Q9UHC3 531 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 KIAA1210Q9ULL0 1709 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 IBTKQ9P2D0 1353 aaPredicted RBP9.02□□□□□ -0.97
VPS41-202ENST00000310301 TRAF5O00463 557 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 KRT15P19012 456 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 CALML3P27482 149 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 STX2P32856 288 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 ITIH3Q06033 890 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 ABCB5Q2M3G0 1257 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 NUP58Q9BVL2 599 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 KLHL14Q9P2G3 628 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 KCNH3Q9ULD8 1083 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 MAPK8IP1Q9UQF2 711 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 CEP85Q6P2H3 762 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 FAM173BQ6P4H8 233 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 EFCAB13Q8IY85 973 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 DCTPP1Q9H773 170 aa9.02□□□□□ -0.97
VPS41-202ENST00000310301 RGS16O15492 202 aaPredicted RBP9.01□□□□□ -0.97
VPS41-202ENST00000310301 CELF2O95319 508 aaKnown RBP9.01□□□□□ -0.97
VPS41-202ENST00000310301 ZBTB17Q13105 803 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 ZNF174Q15697 407 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 STRIP1Q5VSL9 837 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 RILPQ96NA2 401 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 COPRSQ9NQ92 184 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
VPS41-202ENST00000310301 SH3BP5O60239 455 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 KRT9P35527 623 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 E2F5Q15329 346 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 SF3B3Q15393 1217 aaKnown RBP9.01□□□□□ -0.97
VPS41-202ENST00000310301 ANO1Q5XXA6 986 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 RASEFQ8IZ41 740 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 TTLL11Q8NHH1 800 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 DBNDD2Q9BQY9 259 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 SAR1BQ9Y6B6 198 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 IRX4P78413 519 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 RASA3Q14644 834 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 PROSER3Q2NL68 480 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 LRRC43Q8N309 656 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 XPO4Q9C0E2 1151 aaKnown RBP9.01□□□□□ -0.97
VPS41-202ENST00000310301 TSKSQ9UJT2 592 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 KCNH4Q9UQ05 1017 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 ARHGAP42A6NI28 874 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 ASNSP08243 561 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 GNA11P29992 359 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 CA8P35219 290 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 COPB2P35606 906 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 MAGEA1P43355 309 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
VPS41-202ENST00000310301 PDE4DQ08499 809 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 SLC9C1Q4G0N8 1177 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 GPIHBP1Q8IV16 184 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 GTF3C2Q8WUA4 911 aaPredicted RBP9.01□□□□□ -0.97
VPS41-202ENST00000310301 AP5M1Q9H0R1 490 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 MED4Q9NPJ6 270 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 TAB2Q9NYJ8 693 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 H7C1W4 665 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 KRT5P13647 590 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 NT5C2P49902 561 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 PAK1Q13153 545 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 DBN1Q16643 649 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 SV2BQ7L1I2 683 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 RPGRIP1Q96KN7 1286 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 LZTS2Q9BRK4 669 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 SYT17Q9BSW7 474 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 VCX3AQ9NNX9 186 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
VPS41-202ENST00000310301 POLR2DO15514 142 aaKnown RBP9□□□□□ -0.97
VPS41-202ENST00000310301 GAS8O95995 478 aa9□□□□□ -0.97
VPS41-202ENST00000310301 TROVE2P10155 538 aaKnown RBP eCLIP9□□□□□ -0.97
VPS41-202ENST00000310301 LRMPQ12912 555 aa9□□□□□ -0.97
VPS41-202ENST00000310301 MLKLQ8NB16 471 aa9□□□□□ -0.97
VPS41-202ENST00000310301 ISCA1Q9BUE6 129 aa9□□□□□ -0.97
VPS41-202ENST00000310301 CD209Q9NNX6 404 aa9□□□□□ -0.97
VPS41-202ENST00000310301 PPP1R9AQ9ULJ8 1098 aa9□□□□□ -0.97
VPS41-202ENST00000310301 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9□□□□□ -0.97
VPS41-202ENST00000310301 PRAMEF22A3QJZ6 481 aa9□□□□□ -0.97
VPS41-202ENST00000310301 ZNF202O95125 648 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms