RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 CT47A1Q5JQC4 288 aaPredicted RBP27.2■■□□□ 1.95
RFWD2-201ENST00000308769 VSTM4Q8IW00 320 aa27.2■■□□□ 1.95
RFWD2-201ENST00000308769 SFPQP23246 707 aaKnown RBP eCLIP27.2■■□□□ 1.94
RFWD2-201ENST00000308769 TECP42680 631 aa27.2■■□□□ 1.94
RFWD2-201ENST00000308769 GRIPAP1Q4V328 841 aa27.2■■□□□ 1.94
RFWD2-201ENST00000308769 DCAF4Q8WV16 495 aa27.2■■□□□ 1.94
RFWD2-201ENST00000308769 COL2A1P02458 1487 aaPredicted RBP27.19■■□□□ 1.94
RFWD2-201ENST00000308769 CLRN2A0PK11 232 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 SPDYE2BA6NHP3 402 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 TCP10L2B9ZVM9 353 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 TDP2O95551 362 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 RPN1P04843 607 aaKnown RBP27.19■■□□□ 1.94
RFWD2-201ENST00000308769 SPDYE6P0CI01 402 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 TNNI2P48788 182 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 RRP1BQ14684 758 aaKnown RBP27.19■■□□□ 1.94
RFWD2-201ENST00000308769 AK8Q96MA6 479 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 C16orf45Q96MC5 204 aaPredicted RBP27.19■■□□□ 1.94
RFWD2-201ENST00000308769 ZBTB12Q9Y330 459 aaPredicted RBP27.19■■□□□ 1.94
RFWD2-201ENST00000308769 SLC37A4O43826 429 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 SPATA1Q5VX52 437 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 CABP7Q86V35 215 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 CTNND2Q9UQB3 1225 aa27.19■■□□□ 1.94
RFWD2-201ENST00000308769 USP27XA6NNY8 438 aa27.18■■□□□ 1.94
RFWD2-201ENST00000308769 TPM2P07951 284 aa27.18■■□□□ 1.94
RFWD2-201ENST00000308769 CLK2P49760 499 aaKnown RBP27.18■■□□□ 1.94
RFWD2-201ENST00000308769 ORC2Q13416 577 aaPredicted RBP27.18■■□□□ 1.94
RFWD2-201ENST00000308769 CUL5Q93034 780 aa27.18■■□□□ 1.94
RFWD2-201ENST00000308769 GH2P01242 217 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 VIL1P09327 827 aaKnown RBP27.17■■□□□ 1.94
RFWD2-201ENST00000308769 PLCG1P19174 1290 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 QRICH1Q2TAL8 776 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 GMLQ99445 158 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 UQCRHLA0A096LP55 91 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 COBLO75128 1261 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 UQCRHP07919 91 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 TXKP42681 527 aa27.17■■□□□ 1.94
RFWD2-201ENST00000308769 NUP88Q99567 741 aaPredicted RBP27.17■■□□□ 1.94
RFWD2-201ENST00000308769 F5H6K3 240 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 KLRC3Q07444 240 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 CALCRLQ16602 461 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 MTMR9Q96QG7 549 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 KBTBD4Q9NVX7 518 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 TMOD2Q9NZR1 351 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 GDAQ9Y2T3 454 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 CDC37Q16543 378 aaPredicted RBP27.16■■□□□ 1.94
RFWD2-201ENST00000308769 ZNF658Q5TYW1 1059 aaPredicted RBP27.16■■□□□ 1.94
RFWD2-201ENST00000308769 IGSF22Q8N9C0 903 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 PSTPIP2Q9H939 334 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 RMND1Q9NWS8 449 aa27.16■■□□□ 1.94
RFWD2-201ENST00000308769 TPD52L1Q16890 204 aaPredicted RBP27.15■■□□□ 1.94
RFWD2-201ENST00000308769 RBM26Q5T8P6 1007 aaKnown RBP27.15■■□□□ 1.94
RFWD2-201ENST00000308769 MMTAG2Q9BU76 263 aaKnown RBP27.15■■□□□ 1.94
RFWD2-201ENST00000308769 MRPL12P52815 198 aaKnown RBP27.14■■□□□ 1.94
RFWD2-201ENST00000308769 DLGAP5Q15398 846 aa27.14■■□□□ 1.94
RFWD2-201ENST00000308769 ZNF70Q9UC06 446 aaPredicted RBP27.14■■□□□ 1.94
RFWD2-201ENST00000308769 NDUFB10O96000 172 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 GOLGA8FQ08AF8 430 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 GOLGA8DPQ0D2H9 430 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 CDKAL1Q5VV42 579 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 GMCL1P1Q8NEA9 526 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.14■■□□□ 1.93
RFWD2-201ENST00000308769 HDAC9Q9UKV0 1011 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 MAPK8IP1Q9UQF2 711 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 PCDHA1Q9Y5I3 950 aa27.14■■□□□ 1.93
RFWD2-201ENST00000308769 APTXQ7Z2E3 356 aaKnown RBP27.13■■□□□ 1.93
RFWD2-201ENST00000308769 OGFOD1Q8N543 542 aa27.13■■□□□ 1.93
RFWD2-201ENST00000308769 SLC16A10Q8TF71 515 aa27.13■■□□□ 1.93
RFWD2-201ENST00000308769 KLRC4O43908 158 aa27.13■■□□□ 1.93
RFWD2-201ENST00000308769 SNAP25P60880 206 aa27.13■■□□□ 1.93
RFWD2-201ENST00000308769 PRIMPOLQ96LW4 560 aa27.13■■□□□ 1.93
RFWD2-201ENST00000308769 A0A1W2PRG0 241 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L15C9J2P7 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L13C9JLJ4 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L11C9JVI0 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L18D6R9N7 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L22D6RA61 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L17D6RBQ6 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L19D6RCP7 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L20D6RJB6 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L24Q0WX57 530 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 PAK1Q13153 545 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 DHX8Q14562 1220 aaKnown RBP27.12■■□□□ 1.93
RFWD2-201ENST00000308769 KMT5BQ4FZB7 885 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 USP17L6PQ6QN14 398 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 TRMT1Q9NXH9 659 aaKnown RBP27.12■■□□□ 1.93
RFWD2-201ENST00000308769 HERC5Q9UII4 1024 aaKnown RBP27.12■■□□□ 1.93
RFWD2-201ENST00000308769 CNTNAP1P78357 1384 aa27.12■■□□□ 1.93
RFWD2-201ENST00000308769 A0A1B0GTH6 734 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 PRCPP42785 496 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 GMCL1Q96IK5 515 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 CUEDC2Q9H467 287 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 MYL1P05976 194 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 NR1I3Q14994 352 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 CCAR2Q8N163 923 aaKnown RBP27.11■■□□□ 1.93
RFWD2-201ENST00000308769 NELFBQ8WX92 580 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 RWDD2AQ9UIY3 292 aa27.11■■□□□ 1.93
RFWD2-201ENST00000308769 ATF5Q9Y2D1 282 aaPredicted RBP27.11■■□□□ 1.93
RFWD2-201ENST00000308769 POTEMA6NI47 508 aa27.1■■□□□ 1.93
RFWD2-201ENST00000308769 TNNT1P13805 278 aa27.1■■□□□ 1.93
RFWD2-201ENST00000308769 FXR2P51116 673 aaKnown RBP eCLIP27.1■■□□□ 1.933e-8■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms