RNA–Protein interactions for RNA: ENST00000303927.3

CAVIN3-201, Transcript of caveolae associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN3, Length 1,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-201ENST00000303927 LRRC41Q15345 812 aa23.38■■□□□ 1.33
CAVIN3-201ENST00000303927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.38■■□□□ 1.33
CAVIN3-201ENST00000303927 CHST3Q7LGC8 479 aa23.38■■□□□ 1.33
CAVIN3-201ENST00000303927 TMEM87BQ96K49 555 aa23.38■■□□□ 1.33
CAVIN3-201ENST00000303927 TINF2Q9BSI4 451 aa23.38■■□□□ 1.33
CAVIN3-201ENST00000303927 NRBP1Q9UHY1 535 aa23.38■■□□□ 1.33
CAVIN3-201ENST00000303927 RIPK3Q9Y572 518 aa23.38■■□□□ 1.33
CAVIN3-201ENST00000303927 ZNF536O15090 1300 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 PRC1O43663 620 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 ADCYAP1R1P41586 468 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 ZNF792Q3KQV3 632 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 CCDC174Q6PII3 467 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 IGDCC4Q8TDY8 1250 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 XPNPEP3Q9NQH7 507 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 DIS3Q9Y2L1 958 aaKnown RBP23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 SMCHD1A6NHR9 2005 aa23.37■■□□□ 1.33
CAVIN3-201ENST00000303927 ICAM1P05362 532 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 GOLGA8HP0CJ92 632 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 RARBP10826 455 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 SNX17Q15036 470 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 TRIM60Q495X7 471 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 TMTC2Q8N394 836 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 FERMT2Q96AC1 680 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 AGBL1Q96MI9 1066 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 NEK1Q96PY6 1258 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 ACAD9Q9H845 621 aa23.36■■□□□ 1.33
CAVIN3-201ENST00000303927 HSPA4P34932 840 aa23.35■■□□□ 1.33
CAVIN3-201ENST00000303927 CATIPQ7Z7H3 387 aa23.35■■□□□ 1.33
CAVIN3-201ENST00000303927 SLC17A8Q8NDX2 589 aa23.35■■□□□ 1.33
CAVIN3-201ENST00000303927 DDX11Q96FC9 970 aa23.35■■□□□ 1.33
CAVIN3-201ENST00000303927 PRDM5Q9NQX1 630 aaPredicted RBP23.35■■□□□ 1.33
CAVIN3-201ENST00000303927 CCPG1Q9ULG6 757 aa23.35■■□□□ 1.33
CAVIN3-201ENST00000303927 ALAS1P13196 640 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 TAL1P17542 331 aaPredicted RBP23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 SNAP25P60880 206 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 RASEFQ8IZ41 740 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 ANKRD35Q8N283 1001 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 KCNB2Q92953 911 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 TRERF1Q96PN7 1200 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 UBA5Q9GZZ9 404 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 LY9Q9HBG7 655 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 HOMER2Q9NSB8 354 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 RNF146Q9NTX7 359 aa23.34■■□□□ 1.33
CAVIN3-201ENST00000303927 WDR19Q8NEZ3 1342 aa23.33■■□□□ 1.33
CAVIN3-201ENST00000303927 SH2B2O14492 632 aaPredicted RBP23.33■■□□□ 1.33
CAVIN3-201ENST00000303927 HMGB1P09429 215 aaKnown RBP23.33■■□□□ 1.33
CAVIN3-201ENST00000303927 LIFRP42702 1097 aa23.33■■□□□ 1.33
CAVIN3-201ENST00000303927 MTMR10Q9NXD2 777 aa23.33■■□□□ 1.33
CAVIN3-201ENST00000303927 PHF24Q9UPV7 400 aa23.33■■□□□ 1.33
CAVIN3-201ENST00000303927 LAMA2P24043 3122 aaKnown RBP23.33■■□□□ 1.33
CAVIN3-201ENST00000303927 PGK1P00558 417 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 ZNF865P0CJ78 1059 aaPredicted RBP23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 TROAPQ12815 778 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 GRM4Q14833 912 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 C1orf53Q5VUE5 145 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 RNF180Q86T96 592 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 ADGRF4Q8IZF3 695 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 MAP3K14Q99558 947 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 SENP2Q9HC62 589 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 PDLIM7Q9NR12 457 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 MAD2L2Q9UI95 211 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 CNPY2Q9Y2B0 182 aa23.32■■□□□ 1.32
CAVIN3-201ENST00000303927 PALM3A6NDB9 673 aaPredicted RBP23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 CCDC69A6NI79 296 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 KLRF2D3W0D1 207 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 DHX16O60231 1041 aaKnown RBP23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 DDAH1O94760 285 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 AKR1A1P14550 325 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 ADCK5Q3MIX3 580 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 NFXL1Q6ZNB6 911 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 DHX32Q7L7V1 743 aaKnown RBP23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 STAG2Q8N3U4 1231 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 MSL3Q8N5Y2 521 aaKnown RBP23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 LENG1Q96BZ8 264 aaPredicted RBP23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 STXBP5LQ9Y2K9 1186 aa23.31■■□□□ 1.32
CAVIN3-201ENST00000303927 DNAJC25-GNG10A0A024R161 153 aa23.3■■□□□ 1.32
CAVIN3-201ENST00000303927 EIF5BO60841 1220 aaKnown RBP23.3■■□□□ 1.32
CAVIN3-201ENST00000303927 CDC37Q16543 378 aaPredicted RBP23.3■■□□□ 1.32
CAVIN3-201ENST00000303927 ZNF654Q8IZM8 581 aa23.3■■□□□ 1.32
CAVIN3-201ENST00000303927 CPVLQ9H3G5 476 aa23.3■■□□□ 1.32
CAVIN3-201ENST00000303927 SYNGAP1Q96PV0 1343 aa23.3■■□□□ 1.32
CAVIN3-201ENST00000303927 BAZ2BQ9UIF8 2168 aaKnown RBP23.3■■□□□ 1.32
CAVIN3-201ENST00000303927 KIF5BP33176 963 aa23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 EXOSC10Q01780 885 aaKnown RBP23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 COL9A3Q14050 684 aaPredicted RBP23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 CTCFLQ8NI51 663 aaPredicted RBP23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 BADQ92934 168 aa23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 A1CFQ9NQ94 594 aaKnown RBP23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 SNX14Q9Y5W7 946 aa23.29■■□□□ 1.32
CAVIN3-201ENST00000303927 A0A1W2PQ45 241 aaPredicted RBP23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 A0A1W2PQY0 241 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 TRIM43BA6NCK2 446 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 ADAMTS4O75173 837 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 CALM1P0DP23 149 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 CALM2P0DP24 149 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 CALM3P0DP25 149 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 TLE2Q04725 743 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 MUM1L1Q5H9M0 696 aa23.28■■□□□ 1.32
CAVIN3-201ENST00000303927 SH3RF1Q7Z6J0 888 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms