RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 VWA5AO00534 786 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 WDR46O15213 610 aaKnown RBP21.04■□□□□ 0.96
BBC3-201ENST00000300880 CTAGE5O15320 804 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 DUSP11O75319 330 aaKnown RBP21.04■□□□□ 0.96
BBC3-201ENST00000300880 CD4P01730 458 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 STAT3P40763 770 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 OTOP2Q7RTS6 562 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 SDR42E1Q8WUS8 393 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 IL17RAQ96F46 866 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 ARMT1Q9H993 441 aa21.04■□□□□ 0.96
BBC3-201ENST00000300880 ZHX1Q9UKY1 873 aaPredicted RBP21.04■□□□□ 0.96
BBC3-201ENST00000300880 BRWD1Q9NSI6 2320 aa21.03■□□□□ 0.96
BBC3-201ENST00000300880 C6orf222P0C671 652 aaPredicted RBP21.03■□□□□ 0.96
BBC3-201ENST00000300880 ICA1Q05084 483 aa21.03■□□□□ 0.96
BBC3-201ENST00000300880 CREB3L3Q68CJ9 461 aa21.03■□□□□ 0.96
BBC3-201ENST00000300880 LCORLQ8N3X6 602 aa21.03■□□□□ 0.96
BBC3-201ENST00000300880 SNX14Q9Y5W7 946 aa21.03■□□□□ 0.96
BBC3-201ENST00000300880 DNAJC25-GNG10A0A024R161 153 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 A0A0U1RQG5 324 aaPredicted RBP21.02■□□□□ 0.95
BBC3-201ENST00000300880 SLC27A2O14975 620 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 FOXP2O15409 715 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 FGBP02675 491 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 GNAT2P19087 354 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 MAMDC4Q6UXC1 1216 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 VTI1AQ96AJ9 217 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 FGD4Q96M96 766 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 UPF3AQ9H1J1 476 aaKnown RBP21.02■□□□□ 0.95
BBC3-201ENST00000300880 ARHGEF10LQ9HCE6 1279 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 RIPK3Q9Y572 518 aa21.02■□□□□ 0.95
BBC3-201ENST00000300880 PATL2C9JE40 543 aaKnown RBP21.01■□□□□ 0.95
BBC3-201ENST00000300880 GJA9P57773 515 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 RABEP1Q15276 862 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 RNF20Q5VTR2 975 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 KRT40Q6A162 431 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 RASEFQ8IZ41 740 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 DDRGK1Q96HY6 314 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 TSPYL2Q9H2G4 693 aaPredicted RBP21.01■□□□□ 0.95
BBC3-201ENST00000300880 DCP1AQ9NPI6 582 aaPredicted RBP21.01■□□□□ 0.95
BBC3-201ENST00000300880 PPP1R9AQ9ULJ8 1098 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 HCN4Q9Y3Q4 1203 aa21.01■□□□□ 0.95
BBC3-201ENST00000300880 EPOPA6NHQ4 379 aa21■□□□□ 0.95
BBC3-201ENST00000300880 TLL1O43897 1013 aa21■□□□□ 0.95
BBC3-201ENST00000300880 PPP2R2DQ66LE6 453 aa21■□□□□ 0.95
BBC3-201ENST00000300880 CTNNA3Q9UI47 895 aa21■□□□□ 0.95
BBC3-201ENST00000300880 MTCH2Q9Y6C9 303 aa21■□□□□ 0.95
BBC3-201ENST00000300880 GREB1LQ9C091 1923 aaPredicted RBP20.99■□□□□ 0.95
BBC3-201ENST00000300880 FAM86C2PA6NEL3 165 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 EEF2P13639 858 aaKnown RBP20.99■□□□□ 0.95
BBC3-201ENST00000300880 CCL23P55773 120 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 BEX3Q00994 111 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 ACVR2BQ13705 512 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 ALX1Q15699 326 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 CCDC144BQ3MJ40 725 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 GNASQ5JWF2 1037 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 FAM83BQ5T0W9 1011 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 MSL3Q8N5Y2 521 aaKnown RBP20.99■□□□□ 0.95
BBC3-201ENST00000300880 PCSK9Q8NBP7 692 aaKnown RBP20.99■□□□□ 0.95
BBC3-201ENST00000300880 CRNKL1Q9BZJ0 848 aaKnown RBP20.99■□□□□ 0.95
BBC3-201ENST00000300880 WNT8AQ9H1J5 351 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
BBC3-201ENST00000300880 GRIN2DO15399 1336 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 CYP2D7A0A087X1C5 515 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 PRKAB2O43741 272 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 FGAP02671 866 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 APPP05067 770 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 PTGS1P23219 599 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 SKIV2LQ15477 1246 aaKnown RBP20.98■□□□□ 0.95
BBC3-201ENST00000300880 TMEM31Q5JXX7 168 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 SLC43A3Q8NBI5 491 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 KATNBL1Q9H079 304 aa20.98■□□□□ 0.95
BBC3-201ENST00000300880 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.98■□□□□ 0.95
BBC3-201ENST00000300880 ASTN1O14525 1302 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 PTPRSQ13332 1948 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 GSG1L2A8MUP6 293 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 TLR3O15455 904 aaKnown RBP20.97■□□□□ 0.95
BBC3-201ENST00000300880 CYP21A2P08686 494 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 AAK1Q2M2I8 961 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 TSGA10IPQ3SY00 556 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 IFNL3Q8IZI9 196 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 HIPK3Q9H422 1215 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 CERS4Q9HA82 394 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 SWAP70Q9UH65 585 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 PCDHA11Q9Y5I1 949 aa20.97■□□□□ 0.95
BBC3-201ENST00000300880 ZMYM6O95789 1325 aa20.96■□□□□ 0.95
BBC3-201ENST00000300880 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.96■□□□□ 0.95
BBC3-201ENST00000300880 ARHGEF15O94989 841 aa20.96■□□□□ 0.95
BBC3-201ENST00000300880 POU3F3P20264 500 aaPredicted RBP20.96■□□□□ 0.95
BBC3-201ENST00000300880 ALYREFQ86V81 257 aaKnown RBP20.96■□□□□ 0.95
BBC3-201ENST00000300880 NUP88Q99567 741 aaPredicted RBP20.96■□□□□ 0.95
BBC3-201ENST00000300880 SH2D4AQ9H788 454 aa20.96■□□□□ 0.95
BBC3-201ENST00000300880 EPB41L4AQ9HCS5 686 aaPredicted RBP20.96■□□□□ 0.95
BBC3-201ENST00000300880 CD320Q9NPF0 282 aa20.96■□□□□ 0.95
BBC3-201ENST00000300880 COL4A4P53420 1690 aaPredicted RBP20.96■□□□□ 0.95
BBC3-201ENST00000300880 MYH4Q9Y623 1939 aa20.96■□□□□ 0.95
BBC3-201ENST00000300880 CDK8P49336 464 aa20.95■□□□□ 0.94
BBC3-201ENST00000300880 NKX3-2P78367 333 aa20.95■□□□□ 0.94
BBC3-201ENST00000300880 SNRNP48Q6IEG0 339 aaKnown RBP20.95■□□□□ 0.94
BBC3-201ENST00000300880 CXCL17Q6UXB2 119 aa20.95■□□□□ 0.94
BBC3-201ENST00000300880 DDX11Q96FC9 970 aa20.95■□□□□ 0.94
BBC3-201ENST00000300880 NOC4LQ9BVI4 516 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms