RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ORC2Q13416 577 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 COG2Q14746 738 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 QRICH1Q2TAL8 776 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 GPAT2Q6NUI2 795 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 RGMBQ6NW40 437 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 C6orf50Q9HD87 102 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 ZDHHC9Q9Y397 364 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 PIK3CDO00329 1044 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 INHBEP58166 350 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 MOB2Q70IA6 237 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 CMTR1Q8N1G2 835 aaKnown RBP9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 M0R2N6 131 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 SSBP05455 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 PTMSP20962 102 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 CT47A1Q5JQC4 288 aaPredicted RBP9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 CCDC84Q86UT8 332 aaPredicted RBP9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 FBXO11Q86XK2 927 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 SPICE1Q8N0Z3 855 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 SCLT1Q96NL6 688 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 UBA5Q9GZZ9 404 aa9.65□□□□□ -0.86
PTPDC1-201ENST00000288976 BECN2A8MW95 431 aa9.65□□□□□ -0.87
PTPDC1-201ENST00000288976 VWA5AO00534 786 aa9.65□□□□□ -0.87
PTPDC1-201ENST00000288976 TNFRSF25Q93038 417 aa9.65□□□□□ -0.87
PTPDC1-201ENST00000288976 PPP1R11O60927 126 aaPredicted RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 FLOT1O75955 427 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 TRAPPC10P48553 1259 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 HUNKP57058 714 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 TPM4P67936 248 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 HEATR3Q7Z4Q2 680 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 GBP4Q96PP9 640 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 MRPL11Q9Y3B7 192 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 GOLGB1Q14789 3259 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 TPM3P06753 285 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 SLC16A2P36021 539 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 ADCY7P51828 1080 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 NAPAP54920 295 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 AP3B2Q13367 1082 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 NPY5RQ15761 445 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 TSR1Q2NL82 804 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 CCAR2Q8N163 923 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 CUL5Q93034 780 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 ZNF536O15090 1300 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 FAM155AB1AL88 458 aaPredicted RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 SREBF2Q12772 1141 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 ZYXQ15942 572 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 TREML2Q5T2D2 321 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 SHISA4Q96DD7 197 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 BEGAINQ9BUH8 593 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 LRRC37A2A6NM11 1700 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 CACNA1GO43497 2377 aa9.64□□□□□ -0.87
PTPDC1-201ENST00000288976 RASSF10A6NK89 507 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 GADL1Q6ZQY3 521 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 MCF2L2Q86YR7 1114 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 BLIDQ8IZY5 108 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 NLRP5P59047 1200 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 KRT25Q7Z3Z0 450 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 NOSTRINQ8IVI9 506 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 ZNF396Q96N95 335 aaPredicted RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 NAP1L5Q96NT1 182 aaPredicted RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 VPS54Q9P1Q0 977 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 URB1O60287 2271 aaKnown RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 FRMPD4Q14CM0 1322 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 CA8P35219 290 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 FMR1Q06787 632 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 CCDC82Q8N4S0 544 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 SHCBP1Q8NEM2 672 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 RABGAP1Q9Y3P9 1069 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 RP1L1Q8IWN7 2480 aaPredicted RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 ADGRA2Q96PE1 1338 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 KRT18P05783 430 aaKnown RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 APLP1P51693 650 aa9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 MRPL12P52815 198 aaKnown RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 TNPO1Q92973 898 aaKnown RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 PARK7Q99497 189 aaKnown RBP9.63□□□□□ -0.87
PTPDC1-201ENST00000288976 GCLCP48506 637 aaPredicted RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 HOMER1Q86YM7 354 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 DIS3L2Q8IYB7 885 aaKnown RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 CHST13Q8NET6 341 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 GPKOWQ92917 476 aaPredicted RBP eCLIP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 CCDC47Q96A33 483 aaKnown RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 AIFM3Q96NN9 605 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 PCDHA6Q9UN73 950 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 PCDHA8Q9Y5H6 950 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 PCDHA1Q9Y5I3 950 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 CCL15-CCL14A0A0B4J2E2 113 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 SMCO2A6NFE2 343 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 FOSP01100 380 aaPredicted RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 ZNF157P51786 506 aaPredicted RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 IRX3P78415 501 aaPredicted RBP9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 PKP1Q13835 747 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 CCL15Q16663 113 aa9.62□□□□□ -0.87
PTPDC1-201ENST00000288976 RILPL1Q5EBL4 403 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms