RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 NR1I3Q14994 352 aa22.8■■□□□ 1.24
UBE2F-201ENST00000272930 NYAP1Q6ZVC0 841 aa22.8■■□□□ 1.24
UBE2F-201ENST00000272930 TMEM179Q6ZVK1 233 aa22.8■■□□□ 1.24
UBE2F-201ENST00000272930 CABP7Q86V35 215 aa22.8■■□□□ 1.24
UBE2F-201ENST00000272930 CCDC112Q8NEF3 446 aa22.8■■□□□ 1.24
UBE2F-201ENST00000272930 MTMR9Q96QG7 549 aa22.8■■□□□ 1.24
UBE2F-201ENST00000272930 USP17L10C9JJH3 530 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 KCNB1Q14721 858 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 SHROOM1Q2M3G4 852 aaPredicted RBP22.79■■□□□ 1.24
UBE2F-201ENST00000272930 POTEDQ86YR6 584 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 SIAH1Q8IUQ4 282 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 IGSF22Q8N9C0 903 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 RASSF8Q8NHQ8 419 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 LRRC15Q8TF66 581 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 TRIM34Q9BYJ4 488 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 RWDD2AQ9UIY3 292 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 PRMT6Q96LA8 375 aaPredicted RBP22.79■■□□□ 1.24
UBE2F-201ENST00000272930 CTNND2Q9UQB3 1225 aa22.79■■□□□ 1.24
UBE2F-201ENST00000272930 E4F1Q66K89 784 aaPredicted RBP22.78■■□□□ 1.24
UBE2F-201ENST00000272930 SPECC1LQ69YQ0 1117 aa22.78■■□□□ 1.24
UBE2F-201ENST00000272930 CUL5Q93034 780 aa22.78■■□□□ 1.24
UBE2F-201ENST00000272930 PDGFDQ9GZP0 370 aaPredicted RBP22.78■■□□□ 1.24
UBE2F-201ENST00000272930 KIF13BQ9NQT8 1826 aa22.78■■□□□ 1.24
UBE2F-201ENST00000272930 PSDA5PKW4 1024 aaPredicted RBP22.77■■□□□ 1.24
UBE2F-201ENST00000272930 KLRC4O43908 158 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 PLCG1P19174 1290 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 SEPT2Q15019 361 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 CCDC93Q567U6 631 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 TTLL6Q8N841 843 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 PSMD1Q99460 953 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 TECP42680 631 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 MRPL12P52815 198 aaKnown RBP22.77■■□□□ 1.24
UBE2F-201ENST00000272930 PAK1Q13153 545 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 SLFN13Q68D06 897 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 RTKN2Q8IZC4 609 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 CTAGE1Q96RT6 745 aa22.77■■□□□ 1.24
UBE2F-201ENST00000272930 MMTAG2Q9BU76 263 aaKnown RBP22.77■■□□□ 1.24
UBE2F-201ENST00000272930 SLC1A4P43007 532 aa22.76■■□□□ 1.23
UBE2F-201ENST00000272930 FXR2P51116 673 aaKnown RBP eCLIP22.76■■□□□ 1.23
UBE2F-201ENST00000272930 ICA1Q05084 483 aa22.76■■□□□ 1.23
UBE2F-201ENST00000272930 CALCRLQ16602 461 aa22.76■■□□□ 1.23
UBE2F-201ENST00000272930 PTPN21Q16825 1174 aa22.76■■□□□ 1.23
UBE2F-201ENST00000272930 ABCB5Q2M3G0 1257 aa22.76■■□□□ 1.23
UBE2F-201ENST00000272930 PPP4R3AQ6IN85 833 aa22.76■■□□□ 1.23
UBE2F-201ENST00000272930 ADD3Q9UEY8 706 aaKnown RBP22.76■■□□□ 1.23
UBE2F-201ENST00000272930 SLC37A4O43826 429 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 GMCL1P1Q8NEA9 526 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 PLIN2Q99541 437 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 GDAQ9Y2T3 454 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 RHOBTB3O94955 611 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 TDP2O95551 362 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 PRCPP42785 496 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 PTPN14Q15678 1187 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 UBE2SQ16763 222 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 KMT5BQ4FZB7 885 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 RSBN1LQ6PCB5 846 aaPredicted RBP22.75■■□□□ 1.23
UBE2F-201ENST00000272930 GLT8D2Q9H1C3 349 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 TRMT1Q9NXH9 659 aaKnown RBP22.75■■□□□ 1.23
UBE2F-201ENST00000272930 PAXBP1Q9Y5B6 917 aa22.75■■□□□ 1.23
UBE2F-201ENST00000272930 RIOK3O14730 519 aaKnown RBP22.74■■□□□ 1.23
UBE2F-201ENST00000272930 TNNI2P48788 182 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 QRICH1Q2TAL8 776 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 TMEM139Q8IV31 216 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 ADSSL1Q8N142 457 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 NELFBQ8WX92 580 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 GMLQ99445 158 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 PSTPIP2Q9H939 334 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 COL4A5P29400 1685 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 GDF11O95390 407 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 PBX1P40424 430 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 TXKP42681 527 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 CEP135Q66GS9 1140 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 GMCL1Q96IK5 515 aa22.74■■□□□ 1.23
UBE2F-201ENST00000272930 ATF5Q9Y2D1 282 aaPredicted RBP22.74■■□□□ 1.23
UBE2F-201ENST00000272930 SPDYE2BA6NHP3 402 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 LRRC10BA6NIK2 292 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 F5H6K3 240 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 VIL1P09327 827 aaKnown RBP22.73■■□□□ 1.23
UBE2F-201ENST00000272930 SPDYE6P0CI01 402 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 KCNA3P22001 575 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 KLRC3Q07444 240 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 PDIA5Q14554 519 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 TC2NQ8N9U0 490 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 C7orf25Q9BPX7 421 aa22.73■■□□□ 1.23
UBE2F-201ENST00000272930 LIMA1Q9UHB6 759 aaKnown RBP22.73■■□□□ 1.23
UBE2F-201ENST00000272930 TEX33O43247 280 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 SPAG1Q07617 926 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 CDC37Q16543 378 aaPredicted RBP22.72■■□□□ 1.23
UBE2F-201ENST00000272930 TMEM266Q2M3C6 531 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 GIMAP8Q8ND71 665 aaPredicted RBP22.72■■□□□ 1.23
UBE2F-201ENST00000272930 CALML4Q96GE6 196 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 PPP1R13BQ96KQ4 1090 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 CSRNP1Q96S65 589 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 TRIM9Q9C026 710 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 KIF2AO00139 706 aaPredicted RBP22.72■■□□□ 1.23
UBE2F-201ENST00000272930 JAG1P78504 1218 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 GOLGA8FQ08AF8 430 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 GOLGA8DPQ0D2H9 430 aa22.72■■□□□ 1.23
UBE2F-201ENST00000272930 RBM26Q5T8P6 1007 aaKnown RBP22.72■■□□□ 1.23
UBE2F-201ENST00000272930 RAB34Q9BZG1 259 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms