RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GNAT1P11488 350 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 MCM3P25205 808 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 SLC8A1P32418 973 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 RANBP1P43487 201 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 PLCD1P51178 756 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 SIK1P57059 783 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 TBC1D5Q92609 795 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 STAMQ92783 540 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 EZH1Q92800 747 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 L3MBTL3Q96JM7 780 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 RUFY1Q96T51 708 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 MYO1AQ9UBC5 1043 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 FAM237AA0A1B0GTK4 181 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 IDEP14735 1019 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 FKBP4Q02790 459 aaKnown RBP eCLIP9.74□□□□□ -0.85
VAPB-201ENST00000265619 CDKAL1Q5VV42 579 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 NFRKBQ6P4R8 1299 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 CYP26C1Q6V0L0 522 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 PNMA8AQ86V59 439 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 CCT6BQ92526 530 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 PHKBQ93100 1093 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 DBNDD2Q9BQY9 259 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 CNNM1Q9NRU3 951 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 SLC5A4Q9NY91 659 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 COL18A1P39060 1754 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 SRCAPQ6ZRS2 3230 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 NCK2O43639 380 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 COQ9O75208 318 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 CRKLP46109 303 aaKnown RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 CUL4BQ13620 913 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 KRT31Q15323 416 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 TTC39AQ5SRH9 613 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 CWF19L1Q69YN2 538 aaKnown RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 BRAPQ7Z569 592 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 TBC1D1Q86TI0 1168 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 CNGA4Q8IV77 575 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 KLHL23Q8NBE8 558 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 PROCA1Q8NCQ7 364 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 ZNF274Q96GC6 653 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 TSGA10Q9BZW7 698 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 ACTR5Q9H9F9 607 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 KLF18A0A0U1RQI7 1052 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 PPIP5K2O43314 1243 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 AFMP43652 599 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 MAP3K12Q12852 859 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 SPATA4Q8NEY3 305 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 CERKQ8TCT0 537 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 MS4A14Q96JA4 679 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 FAM210AQ96ND0 272 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 TMEM165Q9HC07 324 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 IQSEC3Q9UPP2 1182 aaPredicted RBP9.73□□□□□ -0.85
VAPB-201ENST00000265619 LMO7Q8WWI1 1683 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 CACNA1FO60840 1977 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 SYNRGQ9UMZ2 1314 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 TTC26A0AVF1 554 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 DPPA5A6NC42 116 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 GOLGA8BA8MQT2 603 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 LAMB3Q13751 1172 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 NT5DC1Q5TFE4 455 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 MLKLQ8NB16 471 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 IFT81Q8WYA0 676 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 SENP2Q9HC62 589 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 RBM12Q9NTZ6 932 aaKnown RBP9.73□□□□□ -0.85
VAPB-201ENST00000265619 GGT7Q9UJ14 662 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 AGAP1Q9UPQ3 857 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 NIP7Q9Y221 180 aaKnown RBP eCLIP9.73□□□□□ -0.85
VAPB-201ENST00000265619 CAPN6Q9Y6Q1 641 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 PHLPP1O60346 1717 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 AFF2P51816 1311 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 A6NHS1 94 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 F8W031 263 aaPredicted RBP9.73□□□□□ -0.85
VAPB-201ENST00000265619 SCNN1BP51168 640 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 ALS2CLQ60I27 953 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 KRT26Q7Z3Y9 468 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 B4GALNT2Q8NHY0 566 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 MLXIPQ9HAP2 919 aa9.73□□□□□ -0.85
VAPB-201ENST00000265619 ACTN4O43707 911 aaKnown RBP9.72□□□□□ -0.85
VAPB-201ENST00000265619 PPP6R2O75170 966 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 ATP4AP20648 1035 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 EPHB4P54760 987 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 KCNJ2P63252 427 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 DRP2Q13474 957 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 ITPK1Q13572 414 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 MSL1Q68DK7 614 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 SLC30A9Q6PML9 568 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 ERICH1Q86X53 443 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 NUP133Q8WUM0 1156 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 NDST4Q9H3R1 872 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 CORO1CQ9ULV4 474 aaPredicted RBP9.72□□□□□ -0.85
VAPB-201ENST00000265619 LRRC37A3O60309 1634 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 GMNCA6NCL1 334 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 FESP07332 822 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 PAPOLAP51003 745 aaKnown RBP9.72□□□□□ -0.85
VAPB-201ENST00000265619 SPATA1Q5VX52 437 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 KRT40Q6A162 431 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms