RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 RUFY1Q96T51 708 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 TSC22D3Q99576 134 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 TUBGCP6Q96RT7 1819 aa15.72■□□□□ 0.11
SCARF1-201ENST00000263071 ATP2C2O75185 946 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 RASSF9O75901 435 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
SCARF1-201ENST00000263071 PLCD1P51178 756 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 TLDC1Q6P9B6 456 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 KRT23Q9C075 422 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 TPX2Q9ULW0 747 aaKnown RBP15.71■□□□□ 0.11
SCARF1-201ENST00000263071 CEP131Q9UPN4 1083 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 PCDH11XQ9BZA7 1347 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 PCDH11YQ9BZA8 1340 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 GOLGA6BA6NDN3 693 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 SMIM24O75264 130 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 IMPDH2P12268 514 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 SF3A3Q12874 501 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCARF1-201ENST00000263071 TRIM47Q96LD4 638 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 TFCP2L1Q9NZI6 479 aa15.71■□□□□ 0.11
SCARF1-201ENST00000263071 FAM163BP0C2L3 166 aa15.71■□□□□ 0.1
SCARF1-201ENST00000263071 CDC25CP30307 473 aa15.71■□□□□ 0.1
SCARF1-201ENST00000263071 KRT2P35908 639 aa15.71■□□□□ 0.1
SCARF1-201ENST00000263071 AARSP49588 968 aaKnown RBP eCLIP15.71■□□□□ 0.1
SCARF1-201ENST00000263071 PPARAQ07869 468 aa15.71■□□□□ 0.1
SCARF1-201ENST00000263071 DPYDQ12882 1025 aa15.71■□□□□ 0.1
SCARF1-201ENST00000263071 PUM3Q15397 648 aaKnown RBP15.71■□□□□ 0.1
SCARF1-201ENST00000263071 TRIM58Q8NG06 486 aa15.71■□□□□ 0.1
SCARF1-201ENST00000263071 PAPOLBQ9NRJ5 636 aaKnown RBP15.71■□□□□ 0.1
SCARF1-201ENST00000263071 BLOC1S6Q9UL45 172 aa15.71■□□□□ 0.1
SCARF1-201ENST00000263071 CACNA1FO60840 1977 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 PDCLQ13371 301 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 CCDC122Q5T0U0 273 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 MAF1Q9H063 256 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 AATFQ9NY61 560 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCARF1-201ENST00000263071 HPCAL4Q9UM19 191 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 PCDHGA4Q9Y5G9 962 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCARF1-201ENST00000263071 LTN1O94822 1766 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 IFNAR1P17181 557 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 TRIM21P19474 475 aaKnown RBP15.7■□□□□ 0.1
SCARF1-201ENST00000263071 CXCR5P32302 372 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 IGHMBP2P38935 993 aaKnown RBP15.7■□□□□ 0.1
SCARF1-201ENST00000263071 PIP4K2BP78356 416 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 CCDC178Q5BJE1 867 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 TTC38Q5R3I4 469 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 ENOX1Q8TC92 643 aaKnown RBP15.7■□□□□ 0.1
SCARF1-201ENST00000263071 NELFBQ8WX92 580 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
SCARF1-201ENST00000263071 KIFC2Q96AC6 838 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 SLC39A2Q9NP94 309 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 TRPC6Q9Y210 931 aa15.7■□□□□ 0.1
SCARF1-201ENST00000263071 USP17L12C9JPN9 530 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 USP17L21D6R901 530 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 KRT31Q15323 416 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 ARHGAP22Q7Z5H3 698 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 KIAA0825Q8IV33 1275 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 TRIM42Q8IWZ5 723 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 FAM81AQ8TBF8 368 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 ESR2Q92731 530 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 ISCA1Q9BUE6 129 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 AHCYL1O43865 530 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 MCM3P25205 808 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 MFN1Q8IWA4 741 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 LPIN2Q92539 896 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 EPAS1Q99814 870 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 STX8Q9UNK0 236 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 CPDO75976 1380 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 TSPY2A6NKD2 308 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 STAT6P42226 847 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 MORC3Q14149 939 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 ACCSLQ4AC99 568 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 BZW1Q7L1Q6 419 aaKnown RBP15.69■□□□□ 0.1
SCARF1-201ENST00000263071 ADGRA1Q86SQ6 560 aa15.69■□□□□ 0.1
SCARF1-201ENST00000263071 NAPGQ99747 312 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-201ENST00000263071 NIP7Q9Y221 180 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCARF1-201ENST00000263071 MAGEB6P1A0A0J9YX57 407 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 ZNF185O15231 689 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 GOLGA8HP0CJ92 632 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 CYP2D6P10635 497 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 PLCB4Q15147 1175 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 UBE3CQ15386 1083 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 SPATA1Q5VX52 437 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 GIGYF2Q6Y7W6 1299 aaKnown RBP15.68■□□□□ 0.1
SCARF1-201ENST00000263071 SMARCAL1Q9NZC9 954 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 ACTN4O43707 911 aaKnown RBP15.68■□□□□ 0.1
SCARF1-201ENST00000263071 GYPCP04921 128 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 UQCRFS1P1P0C7P4 283 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 CC2D2BQ6DHV5 1058 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 SMCR8Q8TEV9 937 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-201ENST00000263071 PLEKHG4BQ96PX9 1271 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 HAUS2Q9NVX0 235 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 ARHGAP23Q9P227 1491 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 ADAMTS3O15072 1205 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 GNAT1P11488 350 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 KLK7P49862 253 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 ARID5AQ03989 594 aa15.68■□□□□ 0.1
SCARF1-201ENST00000263071 NR1I3Q14994 352 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms