RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CTAGE3PQ8IX95 158 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 CCDC93Q567U6 631 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 GRAMD1CQ8IYS0 662 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 RABGAP1Q9Y3P9 1069 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 TTLL1O95922 423 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 MECOMQ03112 1051 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 ODR4Q5SWX8 454 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 BANK1Q8NDB2 785 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 ZNF277Q9NRM2 450 aaPredicted RBP13.38□□□□□ -0.27
SPG11-201ENST00000261866 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 PPP1R2P41236 205 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 PPP2R5AQ15172 486 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 NAA35Q5VZE5 725 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 XPO4Q9C0E2 1151 aaKnown RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 C1orf112Q9NSG2 853 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 INSRP06213 1382 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 HNRNPDLO14979 420 aaKnown RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 BNIP3LO60238 219 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 BUB1BO60566 1050 aaPredicted RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 NOL3O60936 208 aaKnown RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 ADAM9Q13443 819 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 MYOM2P54296 1465 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 GIPC1O14908 333 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 CIAPIN1Q6FI81 312 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 ZNF668Q96K58 619 aaPredicted RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 WDR17Q8IZU2 1322 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 ZNF131P52739 623 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 LACTBP83111 547 aaPredicted RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 TRIM14Q14142 442 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 RPS6KA1Q15418 735 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 ANKRD42Q8N9B4 389 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
SPG11-201ENST00000261866 FAM76AQ8TAV0 307 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 LEMD3Q9Y2U8 911 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 PALLDQ8WX93 1383 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
SPG11-201ENST00000261866 SRGAP2CP0DJJ0 459 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 KRT15P19012 456 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 NDUFA8P51970 172 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 TLR3O15455 904 aaKnown RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 EIF2AK2P19525 551 aaKnown RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 SETDB1Q15047 1291 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 ALDH3A1P30838 453 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 SUPT20HL1Q3ZLR7 823 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 SCARA5Q6ZMJ2 495 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 PCDHB4Q9Y5E5 795 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 RPN1P04843 607 aaKnown RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 PDE6CP51160 858 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 STAT2P52630 851 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 SND1Q7KZF4 910 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPG11-201ENST00000261866 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 RAB20Q9NX57 234 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 ABCC4O15439 1325 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 KCNK3O14649 394 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 ACTN4O43707 911 aaKnown RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 FTOQ9C0B1 505 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPG11-201ENST00000261866 EFCAB6Q5THR3 1501 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 STK25O00506 426 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 CEP85LQ5SZL2 805 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
SPG11-201ENST00000261866 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
SPG11-201ENST00000261866 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 CYP2D6P10635 497 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 ANKRD13CQ8N6S4 541 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 DACT3Q96B18 629 aaPredicted RBP13.35□□□□□ -0.27
SPG11-201ENST00000261866 POLD4Q9HCU8 107 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 CCND2P30279 289 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 CCNA1P78396 465 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 PIH1D3Q9NQM4 214 aaKnown RBP13.35□□□□□ -0.27
SPG11-201ENST00000261866 CLGNO14967 610 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 STAT1P42224 750 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 SLC12A2P55011 1212 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 CC2D2BQ6DHV5 1058 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 BRINP3Q76B58 766 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 DPH5Q9H2P9 285 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 TACC3Q9Y6A5 838 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 DDAH1O94760 285 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 GKAP1Q5VSY0 366 aaPredicted RBP13.35□□□□□ -0.27
SPG11-201ENST00000261866 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 CEP170P1Q96L14 293 aa13.35□□□□□ -0.27
SPG11-201ENST00000261866 SFI1A8K8P3 1242 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms