RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 LOC102724428A0A0B4J2F2 783 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 PRPF3O43395 683 aaKnown RBP10.78□□□□□ -0.68
TUBB1-201ENST00000217133 SLC5A1P13866 664 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 CXCR5P32302 372 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 SIK1P57059 783 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ZBED6P86452 979 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ITPK1Q13572 414 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 PUM3Q15397 648 aaKnown RBP10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ALS2CLQ60I27 953 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 EMBQ6PCB8 327 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 KRT26Q7Z3Y9 468 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 IRF2BP1Q8IU81 584 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 MMGT1Q8N4V1 131 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 LPIN2Q92539 896 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 IFIH1Q9BYX4 1025 aaKnown RBP10.78□□□□□ -0.68
TUBB1-201ENST00000217133 CXorf56Q9H5V9 222 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ZBTB1Q9Y2K1 713 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 AKR1B10O60218 316 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 PKN1Q16512 942 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 ADSSL1Q8N142 457 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 SH2D3CQ8N5H7 860 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 MTRQ99707 1265 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 CENPHQ9H3R5 247 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 THAP9Q9H5L6 903 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 POLD4Q9HCU8 107 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 STIM2Q9P246 746 aa10.77□□□□□ -0.68
TUBB1-201ENST00000217133 TRMT112Q9UI30 125 aaKnown RBP10.77□□□□□ -0.68
TUBB1-201ENST00000217133 GLI3P10071 1580 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 IRS4O14654 1257 aaPredicted RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 UBA7P41226 1012 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 DNA2P51530 1060 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 CTSWP56202 376 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 NNTQ13423 1086 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 TYW1BQ6NUM6 668 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 IQCA1Q86XH1 822 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 GPIHBP1Q8IV16 184 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 PLA2G12BQ9BX93 195 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 HYOU1Q9Y4L1 999 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 PDS5AQ29RF7 1337 aaKnown RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 RIC1Q4ADV7 1423 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 MOCS3O95396 460 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 TCP1P17987 556 aaKnown RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 KLK7P49862 253 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 PMS1P54277 932 aaKnown RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 RASGRF1Q13972 1273 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 MEA1Q16626 185 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 RETREG2Q8NC44 543 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 IFT81Q8WYA0 676 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 SHISA4Q96DD7 197 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 SH3GL2Q99962 352 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 JPH2Q9BR39 696 aaPredicted RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 MTA3Q9BTC8 594 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 MLXIPQ9HAP2 919 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
TUBB1-201ENST00000217133 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
TUBB1-201ENST00000217133 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 MYO1FO00160 1098 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 SNAP23O00161 211 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 SRGNP10124 158 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 TRIM28Q13263 835 aaKnown RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 NFRKBQ6P4R8 1299 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 CREG2Q8IUH2 290 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 TSEN2Q8NCE0 465 aaKnown RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 GIMAP7Q8NHV1 300 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 ZNF507Q8TCN5 953 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 NID2Q14112 1375 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 MEFVO15553 781 aaPredicted RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 CYP7A1P22680 504 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 KCNV1Q6PIU1 500 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 SPATS2Q86XZ4 545 aaKnown RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 C2CD5Q86YS7 1000 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 FAM114A1Q8IWE2 563 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 NOC3LQ8WTT2 800 aaKnown RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 CCDC43Q96MW1 224 aaKnown RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 OSBPL9Q96SU4 736 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 ZSCAN10Q96SZ4 725 aaPredicted RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 ABCF2Q9UG63 623 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 IQSEC3Q9UPP2 1182 aaPredicted RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
TUBB1-201ENST00000217133 PARP4Q9UKK3 1724 aaKnown RBP10.76□□□□□ -0.69
TUBB1-201ENST00000217133 TTMPQ5BVD1 217 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
TUBB1-201ENST00000217133 EHD2Q9NZN4 543 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 CAPN6Q9Y6Q1 641 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 KRT14P02533 472 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 IBSPP21815 317 aaPredicted RBP10.75□□□□□ -0.69
TUBB1-201ENST00000217133 LONP1P36776 959 aaKnown RBP10.75□□□□□ -0.69
TUBB1-201ENST00000217133 CDR1P51861 262 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 CCDC178Q5BJE1 867 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 IFT20Q8IY31 132 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 CNPY4Q8N129 248 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 ANKRD13CQ8N6S4 541 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 CNOT6LQ96LI5 555 aaKnown RBP10.75□□□□□ -0.69
TUBB1-201ENST00000217133 ZIM3Q96PE6 472 aa10.75□□□□□ -0.69
TUBB1-201ENST00000217133 SCN11AQ9UI33 1791 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms