RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Ccp110Q7TSH4 1004 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Q8C5C9 218 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Pus7lQ8CE46 702 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 ToporslQ9D2F8 683 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 FAM186AQ9D9R9 1790 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Myh3P13541 1940 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ccdc24E9PUW8 296 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Gucy1a2F8VQK3 730 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Akap2O54931 893 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Bnip3O55003 187 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 PpardP35396 440 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Stat5bP42232 786 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Pafah1b1P63005 410 aaKnown RBP11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 PcQ05920 1178 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Mex3cQ05A36 652 aaKnown RBP11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Bbof1Q3V079 533 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tsr1Q5SWD9 803 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sept9Q80UG5 583 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ankrd13aQ80UP5 588 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 HdlbpQ8VDJ3 1268 aaKnown RBP11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 AvenQ9D9K3 342 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Eif4enif1Q9EST3 983 aaKnown RBP11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tob2Q9JM55 345 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 CenphQ9QYM8 241 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Col20a1Q923P0 1320 aa11.99□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Izumo3A6PWV3 263 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Aknad1E9Q8N6 675 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 ByslO54825 436 aaKnown RBP11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Emc10Q3TAS6 258 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ell2Q3UKU1 639 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Carmil2Q3V3V9 1296 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Adam6bQ6IMH7 756 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Adck2Q6NSR3 617 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Kif1bpQ6ZPU9 617 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tubb2aQ7TMM9 445 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ttc26Q8BS45 554 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Setdb2Q8C267 713 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Col23a1Q8K4G2 532 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Prpf3Q922U1 683 aaKnown RBP11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 St5Q924W7 1134 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Sh3bp5lQ99LH9 392 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Krt82Q99M74 516 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Tubb2bQ9CWF2 445 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 ParvgQ9ERD8 331 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Cxcl11Q9JHH5 100 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Igsf9bE9PZ19 1328 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Odf2A3KGV1 830 aaKnown RBP11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Otud7bB2RUR8 840 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 ErmardE9Q048 622 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 MthfslL7N466 203 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 GpiP06745 558 aaKnown RBP11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 MarcksP26645 309 aaKnown RBP11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Dynll1P63168 89 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Apba2P98084 750 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Gja5Q01231 358 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Lrsam1Q80ZI6 727 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ccdc181Q80ZU5 509 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Triml1Q8BVP1 470 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Arhgef6Q8K4I3 771 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Trim29Q8R2Q0 587 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Thoc1Q8R3N6 657 aaKnown RBP11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Bap1Q99PU7 728 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ribc1Q9D0B8 379 aa11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Togaram1Q6A070 1776 aaKnown RBP11.98□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Apol7aB2RT54 418 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ppfia4B8QI36 1187 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Nap1l2P51860 460 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ehmt1Q5DW34 1296 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Klra4Q60651 263 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Spag7Q7TNE3 227 aaKnown RBP11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Spata4Q8K3V1 295 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Hexim1Q8R409 356 aaKnown RBP11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Slc14a2Q8R4T9 930 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Eps8l2Q99K30 729 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 C2cd2E9Q3C1 696 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Zfp213E9QAW0 468 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Nmt2O70311 529 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Wee1P47810 646 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 1700013D24RikQ0P521 120 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Prom2Q3UUY6 835 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Rbm12b2Q66JV4 834 aaKnown RBP11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Krt40Q6IFX3 439 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Naif1Q6PFD7 327 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Pabpc4Q6PHQ9 660 aaKnown RBP11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Cand2Q6ZQ73 1235 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Strip1Q8C079 837 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Coro7Q9D2V7 922 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Hs6st3Q9QYK4 470 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Irs4Q9Z0Y7 1216 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 AfdnQ9QZQ1 1820 aaKnown RBP11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Pet2A2AHY8 747 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Cyp26c1B2RXA7 518 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Cdh15P33146 784 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Pold1P52431 1105 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Ankrd13cQ3UX43 541 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Gtpbp10Q8K013 366 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Stn1Q8K2X3 378 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Osbpl1aQ91XL9 950 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Frmd4bQ920B0 1035 aa11.97□□□□□ -0.49
Prpf40b-202ENSMUST00000118287 Nfu1Q9QZ23 255 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 102 ms