RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Lsg1Q3UM18 644 aaKnown RBP11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Dennd2cQ6P9P8 914 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Abtb2Q7TQI7 1024 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tcof1O08784 1320 aaKnown RBP11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Trim43aQ3TL54 445 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ctnna3Q65CL1 895 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cep126Q0VBV7 1103 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Map3k10Q66L42 940 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Csgalnact2Q8C1F4 542 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Fgfr1op2Q9CRA9 253 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Krt20Q9D312 431 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Mfap3lQ9D3X9 409 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Myh4Q5SX39 1939 aa11.66□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ccdc24E9PUW8 296 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Zfp449Q8CB76 518 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Txndc9Q9CQ79 226 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Rgs3Q9DC04 966 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cyp2j7A0A140T8U1 504 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Hnrnph2P70333 449 aaKnown RBP11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Krt9Q6RHW0 743 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cabcoco1Q8CDT7 208 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Lrrc2Q8VDB8 371 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Rhobtb1Q9DAK3 695 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 LdhaP06151 332 aaKnown RBP11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 GsnP13020 780 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Rnf216P58283 853 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ptcd1Q8C2E4 695 aaKnown RBP11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tom1l1Q923U0 474 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Def8Q99J78 448 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 NapaQ9DB05 295 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tsc1Q9EP53 1161 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Fmnl1Q9JL26 1094 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Aox4Q3TYQ9 1336 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Myo5cE9Q1F5 1742 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cnksr1A2A9K7 700 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Wfs1P56695 890 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Acot10Q32MW3 439 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Bend3Q6PAL0 825 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 CaluO35887 315 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Sox5P35710 763 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 PcQ05920 1178 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Nuak1Q641K5 658 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Exoc3Q6KAR6 755 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Arl8aQ8VEH3 186 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Dnajc10Q9DC23 793 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cd274Q9EP73 290 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Gipc1Q9Z0G0 333 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 VmacQ8BP01 174 aa11.65□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Eya2O08575 532 aa11.65□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Timm44O35857 452 aa11.65□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Ube2oQ6ZPJ3 1288 aa11.65□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Lmbrd2Q8C561 694 aa11.65□□□□□ -0.55
Nipbl-201ENSMUST00000052965 MyripQ8K3I4 856 aa11.65□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Cabp5Q9JLK3 173 aa11.65□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Casz1Q9CWL2 1761 aa11.65□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Kcnf1Q7TSH7 493 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Rbm17Q8JZX4 405 aaKnown RBP11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Serpinb6cW4VSP4 379 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Gm4297D3YWB7 211 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Jade1Q6ZPI0 834 aaKnown RBP11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Bola2Q8BGS2 86 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Gimap5Q8BWF2 308 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 1700020D05RikQ99PB1 294 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Nova2D3YVV7 556 aaKnown RBP11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Hnrnph1O35737 449 aaKnown RBP11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Cd22P35329 862 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Myo1gQ5SUA5 1024 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Myl6bQ8CI43 207 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Slc5a4bQ91ZP4 660 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Tex9Q9D845 387 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Ccdc62E9PVD1 701 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Myef2Q8C854 591 aaKnown RBP11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Sugp2Q8CH09 1067 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Ankrd49Q8VE42 238 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Ubxn11Q9D572 484 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Ddx24Q9ESV0 857 aaKnown RBP11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Tmem191cQ9JJB1 302 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Angptl2Q9R045 493 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Ccdc130Q9D516 385 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Kiaa1551Q5DTW7 1521 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Art2aP17981 287 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 LmnaP48678 665 aaKnown RBP11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Irx2P81066 474 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Ifit1Q64282 463 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Card10P58660 1021 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Usp28Q5I043 1051 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Sval3Q76I99 144 aa11.64□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Gm20425E9Q035 978 aaKnown RBP11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 SrprbP47758 269 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Hspa8P63017 646 aaKnown RBP11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 GclcP97494 637 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Glg1Q61543 1175 aaKnown RBP11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Cep70Q6IQY5 616 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 H6pdQ8CFX1 789 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Fermt3Q8K1B8 665 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Q9CR55 154 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 CpQ61147 1061 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Rbm41Q8JZV4 413 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Taf5lQ91WQ5 589 aa11.63□□□□□ -0.55
Nipbl-201ENSMUST00000052965 Gna15P30678 374 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms