RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Klra4Q60651 263 aa22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Dpf2Q61103 391 aaKnown RBP22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Pcdha12Q91Y18 950 aa22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Cabp7Q91ZM8 215 aa22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Zranb2Q9R020 330 aaKnown RBP22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Tbx2Q60707 711 aa22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Spata16Q8C636 571 aa22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Mfap3Q922T2 349 aa22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Tmem191cQ9JJB1 302 aa22.61■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Kcnd1Q03719 651 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Specc1lQ2KN98 1118 aaKnown RBP22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Brip1Q5SXJ3 1174 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Ccdc172Q810N9 267 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Cwc15Q9JHS9 229 aaKnown RBP22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Herc3A6H6S0 1050 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Mybl2P48972 704 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Psen1P49769 467 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Kiaa1211Q5PR69 1207 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Slc10a5Q5PT54 434 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Ccdc122Q8BVN0 290 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Tbc1d9bQ5SVR0 1263 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Kcnj11Q61743 390 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Eps8l1Q8R5F8 716 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Txndc5Q91W90 417 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Cfap45Q9D9U9 551 aa22.6■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Ulk4Q3V129 1303 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Sept2P42208 361 aaKnown RBP22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Tigd5Q499M4 642 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Trak2Q6P9N8 913 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Uchl5Q9WUP7 329 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Col1a1P11087 1453 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Vmn2r71L7N2D8 855 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Adam6bQ6IMH7 756 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 PigsQ6PD26 555 aaKnown RBP22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Ciapin1Q8WTY4 309 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Tgs1Q923W1 853 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Ttc5Q99LG4 440 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Frmpd3A0A140LIW3 1774 aa22.59■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Pak1O88643 545 aa22.58■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 PaoxQ8C0L6 504 aa22.58■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Setdb2Q8C267 713 aa22.58■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 NelfbQ8C4Y3 580 aa22.58■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Ddx27Q921N6 760 aaKnown RBP22.58■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Itga2bQ9QUM0 1033 aa22.58■■□□□ 1.21
Ctdsp1-201ENSMUST00000027367 Jakmip2D3YXK0 820 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Olfr247E9PVJ7 320 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Olfr819K7N727 320 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Akap4Q60662 849 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Tpm4Q6IRU2 248 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Txndc16Q7TN22 820 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Rasal3Q8C2K5 1041 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Ccdc85cE9Q6B2 420 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Qrich1Q3UA37 777 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Nab2Q61127 525 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Fam161bQ8CB59 589 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Alpk1Q9CXB8 1231 aa22.57■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Slc27a3O88561 667 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Sox5P35710 763 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Tc2nQ91XT6 489 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Dnajc19Q9CQV7 116 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Pcdh11xF6ZNL5 1338 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Lrrc32G3XA59 663 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Npr3P70180 536 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Krt87Q6IMF0 495 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 BC048507Q80ZS7 89 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Armc6Q8BNU0 468 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Arhgef19Q8BWA8 802 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Ccdc38Q8CDN8 563 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Zkscan3Q91VW9 553 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Mss51Q9D5Z5 446 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Gm4307E9PZY4 289 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Gm4312K9J7E2 289 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Ncf1Q09014 390 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Recql4Q75NR7 1216 aaKnown RBP22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Wdr3Q8BHB4 942 aaKnown RBP22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Cd248Q91V98 765 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Krt34Q9D646 392 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 SelenooQ9DBC0 667 aa22.56■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Armc3A2AU72 881 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Rsbn1lD3Z0K6 821 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Apol10aQ8CCA5 318 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Cgref1Q8R1U2 281 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Pcdha7Q91Y13 937 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Cul5Q9D5V5 780 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Itgb4A2A863 1818 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Scgb2b18A0A087WPA9 112 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 CtcfQ61164 736 aaKnown RBP22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Klf15Q9EPW2 415 aa22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 SmapQ9R0P4 181 aaKnown RBP22.55■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 RargP18911 458 aaKnown RBP22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 L1td1Q587J6 782 aaKnown RBP22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 CbarpQ66L44 698 aa22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Bbs9Q811G0 885 aa22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Brd3Q8K2F0 726 aaKnown RBP22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Sertad1Q9JL10 236 aa22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Col2a1P28481 1487 aa22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Calcoco2A2A6M5 331 aa22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 GpiP06745 558 aaKnown RBP22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 PpardP35396 440 aa22.54■■□□□ 1.2
Ctdsp1-201ENSMUST00000027367 Kcnb1Q03717 857 aa22.54■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms