RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Znf652Q5DU09 608 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Islr2Q5RKR3 745 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ggnbp2Q5SV77 696 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Zbed4Q80WQ9 1168 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Leng8Q8CBY3 785 aaKnown RBP10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Trim68Q8K243 485 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 TraipQ8VIG6 470 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Atp10bB1AWN4 1474 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Atp7bQ64446 1462 aa10.17□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Mms22lB1AUR6 1238 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cyth2P63034 400 aaKnown RBP10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Tmem132eQ6IEE6 982 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 E330017A01RikQ8BU47 192 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Spata2Q8K004 515 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Eva1bQ8K2Y3 164 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Amotl2Q8K371 772 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Nup133Q8R0G9 1155 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Fam114a2Q8VE88 497 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Rpa1Q8VEE4 623 aaKnown RBP10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Hps3Q91VB4 1002 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Zmynd10Q99ML0 440 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Bicdl1A0JNT9 577 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ccdc85cE9Q6B2 420 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Zw10O54692 779 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Pkp1P97350 728 aaKnown RBP10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cdkl5Q3UTQ8 938 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 PsdQ5DTT2 1024 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Lamc2Q61092 1191 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 BcrQ6PAJ1 1270 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Pank4Q80YV4 820 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 3830403N18RikQ9D6C3 208 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Gsdmdc1Q9D8T2 487 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Gdap2Q9DBL2 498 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Cd2apQ9JLQ0 637 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Dbn1Q9QXS6 706 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Mier3Q3UHF3 551 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 RragbQ6NTA4 374 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ccdc122Q8BVN0 290 aa10.16□□□□□ -0.78
Ctc1-201ENSMUST00000021278 1700024B05RikE9Q6D7 167 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Senp1P59110 640 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Dpf2Q61103 391 aaKnown RBP10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Krt74Q6IFZ9 495 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Camsap3Q80VC9 1252 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ipo5Q8BKC5 1097 aaKnown RBP10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Terf2ipQ91VL8 393 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Smc6Q924W5 1097 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Igf2bp3Q9CPN8 579 aaKnown RBP10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Pus3Q9JI38 481 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 PalmQ9Z0P4 383 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ccdc175E9PVB3 822 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 E9QMW4 1145 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Flot1O08917 428 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Aifm3Q3TY86 605 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Sun3Q5SS91 320 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ppm1fQ8CGA0 452 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Sugp1Q8CH02 643 aaKnown RBP10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Tubgcp2Q921G8 905 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Q9CR55 154 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Fam173bQ9D1Z3 247 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Atp6v1e2Q9D593 226 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ugt1a6bK9J7B2 531 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Stag2O35638 1231 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ugt1a6Q64435 531 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ugt1a7cQ6ZQM8 531 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Pde5aQ8CG03 865 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Rbm28Q8CGC6 750 aaKnown RBP10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 PygbQ8CI94 843 aaKnown RBP10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ivns1abpQ920Q8 642 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Scgb2b20Q9JI02 112 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Ak2Q9WTP6 239 aa10.15□□□□□ -0.78
Ctc1-201ENSMUST00000021278 Mybbp1aQ7TPV4 1344 aaKnown RBP10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Dnm1P39053 867 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 MagohP61327 146 aaKnown RBP10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Q14AM7 275 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Ddb1Q3U1J4 1140 aaKnown RBP10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Cnga2Q62398 664 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Kcnh5Q920E3 988 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Eps8l2Q99K30 729 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 MagohbQ9CQL1 146 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Serbp1Q9CY58 407 aaKnown RBP10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Lrrc34Q9DAM1 415 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 ThegQ9JMB1 375 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Tulp1Q9Z273 543 aa10.15□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Otud7bB2RUR8 840 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Art2bO35975 289 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Irak1Q62406 710 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Xlr3bQ6P205 226 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 March6Q6ZQ89 909 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Sdccag8Q80UF4 717 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Klhl25Q8R2P1 589 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 DolkQ8R2Y3 534 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Usb1Q91W78 267 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Lpin2Q99PI5 893 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Pold4Q9CWP8 107 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Get4Q9D1H7 327 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Peg12Q9WVA7 283 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Nphp4P59240 1425 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 ByslO54825 436 aaKnown RBP10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Pip4k2aO70172 405 aa10.14□□□□□ -0.79
Ctc1-201ENSMUST00000021278 Myo1aO88329 1043 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms