RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR54, Length 86 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR54	snR54	INA17	Q02888	182 aa		2.63	□□□□□ -1.99
snR54	snR54	GRC3	Q07845	632 aa		2.63	□□□□□ -1.99
snR54	snR54	SET6	Q12529	373 aa		2.63	□□□□□ -1.99
snR54	snR54	ARG81	P05085	880 aa		2.62	□□□□□ -1.99
snR54	snR54	SEC62	P21825	274 aa		2.62	□□□□□ -1.99
snR54	snR54	SNC1	P31109	117 aa		2.62	□□□□□ -1.99
snR54	snR54	NDC1	P32500	655 aa		2.62	□□□□□ -1.99
snR54	snR54	AGP2	P38090	596 aa		2.62	□□□□□ -1.99
snR54	snR54	PSY4	P38193	441 aa		2.62	□□□□□ -1.99
snR54	snR54	AXL2	P38928	823 aa		2.62	□□□□□ -1.99
snR54	snR54	SGM1	P47166	707 aa		2.62	□□□□□ -1.99
snR54	snR54	BOR1	P53838	576 aa		2.62	□□□□□ -1.99
snR54	snR54	RSM23	Q01163	450 aa		2.62	□□□□□ -1.99
snR54	snR54	YMR160W	Q03823	816 aa		2.62	□□□□□ -1.99
snR54	snR54	SMA2	Q04658	369 aa		2.62	□□□□□ -1.99
snR54	snR54	RCO1	Q04779	684 aa		2.62	□□□□□ -1.99
snR54	snR54	SNO4	Q04902	237 aa		2.62	□□□□□ -1.99
snR54	snR54	ECM30	Q06673	1274 aa		2.62	□□□□□ -1.99
snR54	snR54	THI20	Q08224	551 aa		2.62	□□□□□ -1.99
snR54	snR54	HSP33	Q08914	237 aa	Known RBP	2.62	□□□□□ -1.99
snR54	snR54	HSP32	Q08992	237 aa		2.62	□□□□□ -1.99
snR54	snR54	YLL056C	Q12177	298 aa		2.62	□□□□□ -1.99
snR54	snR54	SSM4	P40318	1319 aa		2.62	□□□□□ -1.99
snR54	snR54	CBS2	P14905	389 aa		2.61	□□□□□ -1.99
snR54	snR54	PWP1	P21304	576 aa	Known RBP	2.61	□□□□□ -1.99
snR54	snR54	MCK1	P21965	375 aa	Known RBP	2.61	□□□□□ -1.99
snR54	snR54	CMK1	P27466	446 aa	Known RBP	2.61	□□□□□ -1.99
snR54	snR54	PTR2	P32901	601 aa		2.61	□□□□□ -1.99
snR54	snR54	SIP2	P34164	415 aa	Known RBP	2.61	□□□□□ -1.99
snR54	snR54	PCA1	P38360	1216 aa		2.61	□□□□□ -1.99
snR54	snR54	VPS52	P39904	641 aa		2.61	□□□□□ -1.99
snR54	snR54	YER010C	P40011	234 aa		2.61	□□□□□ -1.99
snR54	snR54	DIA3	P52290	468 aa		2.61	□□□□□ -1.99
snR54	snR54	SAM50	P53969	484 aa		2.61	□□□□□ -1.99
snR54	snR54	PSR1	Q07800	427 aa		2.61	□□□□□ -1.99
snR54	snR54	TEN1	Q07921	160 aa		2.61	□□□□□ -1.99
snR54	snR54	CDC45	Q08032	650 aa		2.61	□□□□□ -1.99
snR54	snR54	REV1	P12689	985 aa		2.6	□□□□□ -1.99
snR54	snR54	MTF1	P14908	341 aa	Known RBP	2.6	□□□□□ -1.99
snR54	snR54	PDB1	P32473	366 aa	Known RBP	2.6	□□□□□ -1.99
snR54	snR54	VPS17	P32913	551 aa		2.6	□□□□□ -1.99
snR54	snR54	MTC4	P38335	694 aa	Known RBP	2.6	□□□□□ -1.99
snR54	snR54	LAG1	P38703	411 aa		2.6	□□□□□ -1.99
snR54	snR54	DED81	P38707	554 aa	Known RBP	2.6	□□□□□ -1.99
snR54	snR54	SPG5	P42933	373 aa		2.6	□□□□□ -1.99
snR54	snR54	COS10	P52924	374 aa		2.6	□□□□□ -1.99
snR54	snR54	YGL082W	P53155	381 aa		2.6	□□□□□ -1.99
snR54	snR54	ERG26	P53199	349 aa	Known RBP	2.6	□□□□□ -1.99
snR54	snR54	SMM1	P53720	384 aa	Known RBP	2.6	□□□□□ -1.99
snR54	snR54	RIX7	Q07844	837 aa	Known RBP	2.6	□□□□□ -1.99
snR54	snR54	NKP1	Q12493	238 aa		2.6	□□□□□ -1.99
snR54	snR54	HEM2	P05373	342 aa		2.59	□□□□□ -1.99
snR54	snR54	SYN8	P31377	255 aa		2.59	□□□□□ -1.99
snR54	snR54	SLC1	P33333	303 aa		2.59	□□□□□ -1.99
snR54	snR54	MTR2	P34232	184 aa	Known RBP	2.59	□□□□□ -1.99
snR54	snR54	YTA12	P40341	825 aa		2.59	□□□□□ -1.99
snR54	snR54	LYS4	P49367	693 aa	Predicted RBP	2.59	□□□□□ -1.99
snR54	snR54	RHO4	Q00246	291 aa		2.59	□□□□□ -1.99
snR54	snR54	RLI1	Q03195	608 aa	Known RBP	2.59	□□□□□ -1.99
snR54	snR54	DPB4	Q04603	196 aa	Known RBP	2.59	□□□□□ -1.99
snR54	snR54	ERP1	Q05359	219 aa	Known RBP	2.59	□□□□□ -1.99
snR54	snR54	ENT4	Q07872	247 aa		2.59	□□□□□ -1.99
snR54	snR54	LEU9	Q12166	604 aa	Known RBP	2.59	□□□□□ -1.99
snR54	snR54	AYT1	Q12226	474 aa		2.59	□□□□□ -1.99
snR54	snR54	YOL087C	Q99247	1116 aa		2.59	□□□□□ -1.99
snR54	snR54	VMA16	P23968	213 aa		2.58	□□□□□ -2
snR54	snR54	SPC110	P32380	944 aa		2.58	□□□□□ -2
snR54	snR54	PTH2	P34222	208 aa		2.58	□□□□□ -2
snR54	snR54	YNK1	P36010	153 aa	Known RBP	2.58	□□□□□ -2
snR54	snR54	YNG2	P38806	282 aa	Known RBP	2.58	□□□□□ -2
snR54	snR54	IES5	P40060	125 aa		2.58	□□□□□ -2
snR54	snR54	YJR008W	P47085	338 aa		2.58	□□□□□ -2
snR54	snR54	AAD10	P47182	288 aa		2.58	□□□□□ -2
snR54	snR54	YGR021W	P53212	290 aa		2.58	□□□□□ -2
snR54	snR54	BUD32	P53323	261 aa		2.58	□□□□□ -2
snR54	snR54	DUG3	P53871	357 aa		2.58	□□□□□ -2
snR54	snR54	RPL20A	P0CX23	172 aa	Known RBP	2.57	□□□□□ -2
snR54	snR54	RPL20B	P0CX24	172 aa	Predicted RBP	2.57	□□□□□ -2
snR54	snR54	APE1	P14904	514 aa		2.57	□□□□□ -2
snR54	snR54	KGD1	P20967	1014 aa	Known RBP	2.57	□□□□□ -2
snR54	snR54	YCR022C	P25620	114 aa		2.57	□□□□□ -2
snR54	snR54	CBF2	P32504	956 aa		2.57	□□□□□ -2
snR54	snR54	MRS6	P32864	603 aa	Known RBP	2.57	□□□□□ -2
snR54	snR54	YKL100C	P34248	587 aa		2.57	□□□□□ -2
snR54	snR54	SWH1	P35845	1188 aa		2.57	□□□□□ -2
snR54	snR54	YPI1	P43587	155 aa		2.57	□□□□□ -2
snR54	snR54	GLO2	Q05584	274 aa		2.57	□□□□□ -2
snR54	snR54	ADH7	P25377	361 aa		2.56	□□□□□ -2
snR54	snR54	TIF5	P38431	405 aa	Known RBP	2.56	□□□□□ -2
snR54	snR54	OSH3	P38713	996 aa	Known RBP	2.56	□□□□□ -2
snR54	snR54	RAD30	Q04049	632 aa		2.56	□□□□□ -2
snR54	snR54	VIP1	Q06685	1146 aa	Known RBP	2.56	□□□□□ -2
snR54	snR54	NBP2	Q12163	236 aa		2.56	□□□□□ -2
snR54	snR54	AMD1	P15274	810 aa	Known RBP	2.55	□□□□□ -2
snR54	snR54	BUD5	P25300	642 aa	Predicted RBP	2.55	□□□□□ -2
snR54	snR54	SGF29	P25554	259 aa		2.55	□□□□□ -2
snR54	snR54	YBL055C	P34220	418 aa	Predicted RBP	2.55	□□□□□ -2
snR54	snR54	NUP133	P36161	1157 aa		2.55	□□□□□ -2
snR54	snR54	MAL33	P38157	468 aa		2.55	□□□□□ -2
snR54	snR54	TPM2	P40414	161 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms