RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	EMI2	Q04409	500 aa	Known RBP	2.57	□□□□□ -2
LEE1	YPL054W	GLO2	Q05584	274 aa		2.57	□□□□□ -2
LEE1	YPL054W	PUT2	P07275	575 aa		2.56	□□□□□ -2
LEE1	YPL054W	DBP8	P38719	431 aa		2.56	□□□□□ -2
LEE1	YPL054W	PEX8	P53248	589 aa		2.56	□□□□□ -2
LEE1	YPL054W	YVH1	Q02256	364 aa	Known RBP	2.56	□□□□□ -2
LEE1	YPL054W	HNT3	Q08702	217 aa		2.56	□□□□□ -2
LEE1	YPL054W	VCX1	Q99385	411 aa		2.56	□□□□□ -2
LEE1	YPL054W	PHO81	P17442	1178 aa		2.55	□□□□□ -2
LEE1	YPL054W	RER1	P25560	188 aa		2.55	□□□□□ -2
LEE1	YPL054W	RAD16	P31244	790 aa		2.55	□□□□□ -2
LEE1	YPL054W	PMU1	P36069	295 aa		2.55	□□□□□ -2
LEE1	YPL054W	PYK2	P52489	506 aa	Known RBP	2.55	□□□□□ -2
LEE1	YPL054W	MSO1	P53604	210 aa	Known RBP	2.55	□□□□□ -2
LEE1	YPL054W	ZDS2	P54786	942 aa		2.55	□□□□□ -2
LEE1	YPL054W	RRP12	Q12754	1228 aa	Known RBP	2.55	□□□□□ -2
LEE1	YPL054W	YOR019W	Q99248	730 aa		2.55	□□□□□ -2
LEE1	YPL054W	NUC1	P08466	329 aa		2.54	□□□□□ -2
LEE1	YPL054W	SPT15	P13393	240 aa	Known RBP	2.54	□□□□□ -2
LEE1	YPL054W	YCL049C	P25577	312 aa		2.54	□□□□□ -2
LEE1	YPL054W	DIA4	P38705	446 aa	Predicted RBP	2.54	□□□□□ -2
LEE1	YPL054W	SGM1	P47166	707 aa		2.54	□□□□□ -2
LEE1	YPL054W	PAP2	P53632	584 aa	Known RBP	2.54	□□□□□ -2
LEE1	YPL054W	APJ1	P53940	528 aa		2.54	□□□□□ -2
LEE1	YPL054W	YPL014W	Q02606	381 aa		2.54	□□□□□ -2
LEE1	YPL054W	SDH5	Q08230	162 aa		2.54	□□□□□ -2
LEE1	YPL054W	NUS1	Q12063	375 aa		2.54	□□□□□ -2
LEE1	YPL054W	PCD1	Q12524	340 aa		2.54	□□□□□ -2
LEE1	YPL054W	YBR085C-A	O43137	85 aa		2.53	□□□□□ -2
LEE1	YPL054W	DEG1	P31115	442 aa	Known RBP	2.53	□□□□□ -2
LEE1	YPL054W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.53	□□□□□ -2	not detected
LEE1	YPL054W	TSC10	P38342	320 aa		2.53	□□□□□ -2
LEE1	YPL054W	VPS52	P39904	641 aa		2.53	□□□□□ -2
LEE1	YPL054W	IME4	P41833	600 aa		2.53	□□□□□ -2
LEE1	YPL054W	RHO4	Q00246	291 aa		2.53	□□□□□ -2
LEE1	YPL054W	MRPL13	Q02204	264 aa		2.53	□□□□□ -2
LEE1	YPL054W	ENT4	Q07872	247 aa		2.53	□□□□□ -2
LEE1	YPL054W	TMC1	Q08422	150 aa	Predicted RBP	2.53	□□□□□ -2
LEE1	YPL054W	SUP35	P05453	685 aa	Known RBP	2.52	□□□□□ -2.01
LEE1	YPL054W	NAT1	P12945	854 aa	Known RBP	2.52	□□□□□ -2.01
LEE1	YPL054W	APE1	P14904	514 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	ERG8	P24521	451 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	YME1	P32795	747 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	OSH3	P38713	996 aa	Known RBP	2.52	□□□□□ -2.01
LEE1	YPL054W	YHL041W	P38730	149 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	SHO1	P40073	367 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	ALG8	P40351	577 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	VPS4	P52917	437 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	ERG26	P53199	349 aa	Known RBP	2.52	□□□□□ -2.01
LEE1	YPL054W	SMM1	P53720	384 aa	Known RBP	2.52	□□□□□ -2.01
LEE1	YPL054W	WSC2	P53832	503 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	REG1	Q00816	1014 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	ECM30	Q06673	1274 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	YOR387C	Q08910	206 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	YDL009C	Q12210	107 aa		2.52	□□□□□ -2.01
LEE1	YPL054W	FUN19	P28003	413 aa	Predicted RBP	2.51	□□□□□ -2.01
LEE1	YPL054W	PRS1	P32895	427 aa	Known RBP	2.51	□□□□□ -2.01
LEE1	YPL054W	YBL059W	P34224	193 aa		2.51	□□□□□ -2.01
LEE1	YPL054W	BUR6	P40096	142 aa		2.51	□□□□□ -2.01
LEE1	YPL054W	SEC24	P40482	926 aa	Known RBP	2.51	□□□□□ -2.01
LEE1	YPL054W	RPS10B	P46784	105 aa	Known RBP	2.51	□□□□□ -2.01
LEE1	YPL054W	YNR061C	P53747	219 aa		2.51	□□□□□ -2.01
LEE1	YPL054W	RLI1	Q03195	608 aa	Known RBP	2.51	□□□□□ -2.01
LEE1	YPL054W	MHR1	Q06630	226 aa		2.51	□□□□□ -2.01
LEE1	YPL054W	SYO1	Q07395	620 aa		2.51	□□□□□ -2.01
LEE1	YPL054W	YER078W-A	Q3E7A2	54 aa		2.51	□□□□□ -2.01
LEE1	YPL054W	SOD1	P00445	154 aa	Known RBP	2.5	□□□□□ -2.01
LEE1	YPL054W	LPD1	P09624	499 aa	Known RBP	2.5	□□□□□ -2.01
LEE1	YPL054W	AMD1	P15274	810 aa	Known RBP	2.5	□□□□□ -2.01
LEE1	YPL054W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.5	□□□□□ -2.01	not detected
LEE1	YPL054W	UBC1	P21734	215 aa	Known RBP	2.5	□□□□□ -2.01
LEE1	YPL054W	PUT3	P25502	979 aa	Predicted RBP	2.5	□□□□□ -2.01
LEE1	YPL054W	CBF2	P32504	956 aa		2.5	□□□□□ -2.01
LEE1	YPL054W	NDT80	P38830	627 aa		2.5	□□□□□ -2.01
LEE1	YPL054W	YGR210C	P42942	411 aa		2.5	□□□□□ -2.01
LEE1	YPL054W	INN1	P53901	409 aa		2.5	□□□□□ -2.01
LEE1	YPL054W	RSM23	Q01163	450 aa		2.5	□□□□□ -2.01
LEE1	YPL054W	INA17	Q02888	182 aa		2.5	□□□□□ -2.01
LEE1	YPL054W	PSK2	Q08217	1101 aa		2.5	□□□□□ -2.01
LEE1	YPL054W	ETT1	Q08421	412 aa	Known RBP	2.5	□□□□□ -2.01
LEE1	YPL054W	RPS10A	Q08745	105 aa	Predicted RBP	2.5	□□□□□ -2.01
LEE1	YPL054W	MTF2	P10849	440 aa		2.49	□□□□□ -2.01
LEE1	YPL054W	NAM9	P27929	486 aa		2.49	□□□□□ -2.01
LEE1	YPL054W	YNG2	P38806	282 aa	Known RBP	2.49	□□□□□ -2.01
LEE1	YPL054W	ELO1	P39540	310 aa		2.49	□□□□□ -2.01
LEE1	YPL054W	ALT2	P52892	507 aa		2.49	□□□□□ -2.01
LEE1	YPL054W	ARC35	P53731	342 aa	Known RBP	2.49	□□□□□ -2.01
LEE1	YPL054W	MUB1	Q03162	620 aa		2.49	□□□□□ -2.01
LEE1	YPL054W	RRN11	Q04712	507 aa		2.49	□□□□□ -2.01
LEE1	YPL054W	MRPL51	Q06090	140 aa	Predicted RBP	2.49	□□□□□ -2.01
LEE1	YPL054W	LEU9	Q12166	604 aa	Known RBP	2.49	□□□□□ -2.01
LEE1	YPL054W	YLR302C	O13544	120 aa		2.48	□□□□□ -2.01
LEE1	YPL054W	ATP4	P05626	244 aa		2.48	□□□□□ -2.01
LEE1	YPL054W	PEP5	P12868	1029 aa		2.48	□□□□□ -2.01
LEE1	YPL054W	MSM1	P22438	575 aa		2.48	□□□□□ -2.01
LEE1	YPL054W	YCR022C	P25620	114 aa		2.48	□□□□□ -2.01
LEE1	YPL054W	SPR1	P32603	445 aa		2.48	□□□□□ -2.01
LEE1	YPL054W	TEF4	P36008	412 aa	Known RBP	2.48	□□□□□ -2.01
LEE1	YPL054W	GRX7	P38068	203 aa		2.48	□□□□□ -2.01
LEE1	YPL054W	IFA38	P38286	347 aa		2.48	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms