RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W SPT7P35177 1332 aa3.95□□□□□ -1.78
HSH49YOR319W BI2P03873 423 aa3.94□□□□□ -1.78
HSH49YOR319W CLB1P24868 471 aa3.94□□□□□ -1.78
HSH49YOR319W IMG1P25626 169 aa3.94□□□□□ -1.78
HSH49YOR319W YCR051WP25631 222 aa3.94□□□□□ -1.78
HSH49YOR319W PAP1P29468 568 aaKnown RBP3.94□□□□□ -1.78
HSH49YOR319W TIF3P34167 436 aaKnown RBP3.94□□□□□ -1.78
HSH49YOR319W YBR144CP34215 104 aa3.94□□□□□ -1.78
HSH49YOR319W GCS1P35197 352 aa3.94□□□□□ -1.78
HSH49YOR319W RFC1P38630 861 aaKnown RBP3.94□□□□□ -1.78
HSH49YOR319W EXO1P39875 702 aa3.94□□□□□ -1.78
HSH49YOR319W STP1Q00947 519 aa3.94□□□□□ -1.78
HSH49YOR319W YMR178WQ03219 274 aaKnown RBP3.94□□□□□ -1.78
HSH49YOR319W APL4Q12028 832 aa3.94□□□□□ -1.78
HSH49YOR319W YML133CQ03099 1374 aa3.93□□□□□ -1.78
HSH49YOR319W YLL067CQ07888 1374 aa3.93□□□□□ -1.78
HSH49YOR319W YLL066CQ99208 1374 aa3.93□□□□□ -1.78
HSH49YOR319W RAP1P11938 827 aa3.93□□□□□ -1.78
HSH49YOR319W KGD1P20967 1014 aaKnown RBP3.93□□□□□ -1.78
HSH49YOR319W STE50P25344 346 aa3.93□□□□□ -1.78
HSH49YOR319W BOS1P25385 244 aa3.93□□□□□ -1.78
HSH49YOR319W BUD14P27637 709 aa3.93□□□□□ -1.78
HSH49YOR319W VPH1P32563 840 aaKnown RBP3.93□□□□□ -1.78
HSH49YOR319W ECM32P32644 1121 aaKnown RBP3.93□□□□□ -1.78
HSH49YOR319W YBL055CP34220 418 aaPredicted RBP3.93□□□□□ -1.78
HSH49YOR319W NUP133P36161 1157 aa3.93□□□□□ -1.78
HSH49YOR319W FTH1P38310 465 aa3.93□□□□□ -1.78
HSH49YOR319W DLD2P46681 530 aaKnown RBP3.93□□□□□ -1.78
HSH49YOR319W SAE2P46946 345 aa3.93□□□□□ -1.78
HSH49YOR319W HOS2P53096 452 aaPredicted RBP3.93□□□□□ -1.78
HSH49YOR319W YPR003CP53394 754 aa3.93□□□□□ -1.78
HSH49YOR319W IPI3P53877 555 aa3.93□□□□□ -1.78
HSH49YOR319W BNI5P53890 448 aaKnown RBP3.93□□□□□ -1.78
HSH49YOR319W RPA49Q01080 415 aaPredicted RBP3.93□□□□□ -1.78
HSH49YOR319W AIM32Q04689 311 aa3.93□□□□□ -1.78
HSH49YOR319W VTA1Q06263 330 aa3.93□□□□□ -1.78
HSH49YOR319W RTT109Q07794 436 aa3.93□□□□□ -1.78
HSH49YOR319W YOR389WQ08912 624 aa3.93□□□□□ -1.78
HSH49YOR319W MRP13P12686 339 aa3.92□□□□□ -1.78
HSH49YOR319W MDH1P17505 334 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
HSH49YOR319W ART10P18634 518 aaKnown RBP3.92□□□□□ -1.78
HSH49YOR319W PMT1P33775 817 aa3.92□□□□□ -1.78
HSH49YOR319W APE3P37302 537 aaKnown RBP3.92□□□□□ -1.78
HSH49YOR319W TSC10P38342 320 aa3.92□□□□□ -1.78
HSH49YOR319W CDC1P40986 491 aa3.92□□□□□ -1.78
HSH49YOR319W PTR3P43606 678 aa3.92□□□□□ -1.78
HSH49YOR319W ART5P53244 586 aaKnown RBP3.92□□□□□ -1.78
HSH49YOR319W PFA5Q03289 374 aa3.92□□□□□ -1.78
HSH49YOR319W YLR455WQ06188 304 aa3.92□□□□□ -1.78
HSH49YOR319W YLR049CQ12110 428 aa3.92□□□□□ -1.78
HSH49YOR319W FRE7Q12333 620 aa3.92□□□□□ -1.78
HSH49YOR319W APE1P14904 514 aa3.91□□□□□ -1.78
HSH49YOR319W MAK32P23060 363 aa3.91□□□□□ -1.78
HSH49YOR319W BUD5P25300 642 aaPredicted RBP3.91□□□□□ -1.78
HSH49YOR319W URA7P28274 579 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W MSS51P32335 436 aa3.91□□□□□ -1.78
HSH49YOR319W SAC1P32368 623 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W YME1P32795 747 aa3.91□□□□□ -1.78
HSH49YOR319W MDL1P33310 695 aa3.91□□□□□ -1.78
HSH49YOR319W YKL100CP34248 587 aa3.91□□□□□ -1.78
HSH49YOR319W ICS2P38284 255 aa3.91□□□□□ -1.78
HSH49YOR319W DBP8P38719 431 aa3.91□□□□□ -1.78
HSH49YOR319W CIN4P39110 191 aa3.91□□□□□ -1.78
HSH49YOR319W SNO3P43544 222 aa3.91□□□□□ -1.78
HSH49YOR319W BUD27P43573 796 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
HSH49YOR319W STB2P46679 850 aa3.91□□□□□ -1.78
HSH49YOR319W NMD5P46970 1048 aa3.91□□□□□ -1.78
HSH49YOR319W YJL055WP47044 245 aa3.91□□□□□ -1.78
HSH49YOR319W MNP1P53163 194 aaPredicted RBP3.91□□□□□ -1.78
HSH49YOR319W ERG26P53199 349 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W MPS1P54199 764 aa3.91□□□□□ -1.78
HSH49YOR319W ERG13P54839 491 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W KAP120Q02932 1032 aa3.91□□□□□ -1.78
HSH49YOR319W ARX1Q03862 593 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W EMI2Q04409 500 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W TEN1Q07921 160 aa3.91□□□□□ -1.78
HSH49YOR319W YOL159CQ08300 171 aa3.91□□□□□ -1.78
HSH49YOR319W RDL1Q12305 139 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W PDH1Q12428 516 aaKnown RBP3.91□□□□□ -1.78
HSH49YOR319W YDL007C-AQ2V2Q0 85 aa3.91□□□□□ -1.78
HSH49YOR319W AFI1Q99222 893 aa3.91□□□□□ -1.78
HSH49YOR319W ISN1Q99312 450 aa3.91□□□□□ -1.78
HSH49YOR319W CHO1P08456 276 aa3.9□□□□□ -1.79
HSH49YOR319W KRS1P15180 591 aaKnown RBP3.9□□□□□ -1.79
HSH49YOR319W CPR2P23285 205 aa3.9□□□□□ -1.79
HSH49YOR319W CLB2P24869 491 aa3.9□□□□□ -1.79
HSH49YOR319W YUR1P26725 428 aa3.9□□□□□ -1.79
HSH49YOR319W RXT2P38255 430 aa3.9□□□□□ -1.79
HSH49YOR319W MSR1P38714 643 aa3.9□□□□□ -1.79
HSH49YOR319W CAJ1P39101 391 aa3.9□□□□□ -1.79
HSH49YOR319W ORC5P50874 479 aa3.9□□□□□ -1.79
HSH49YOR319W PDS5Q04264 1277 aa3.9□□□□□ -1.79
HSH49YOR319W RPC11Q04307 110 aaPredicted RBP3.9□□□□□ -1.79
HSH49YOR319W ROY1Q04847 553 aa3.9□□□□□ -1.79
HSH49YOR319W BSP1Q06604 576 aa3.9□□□□□ -1.79
HSH49YOR319W ARG81P05085 880 aa3.89□□□□□ -1.79
HSH49YOR319W GPA1P08539 472 aa3.89□□□□□ -1.79
HSH49YOR319W RPL3P14126 387 aaKnown RBP3.89□□□□□ -1.79
HSH49YOR319W SUI2P20459 304 aaKnown RBP3.89□□□□□ -1.79
HSH49YOR319W TKL1P23254 680 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms