RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	ARP6	Q12509	438 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	COS2	P0CX12	379 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	COS3	P0CX13	379 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	PEX1	P24004	1043 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	MGT1	P26188	188 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	KRE29	P40026	464 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	LCP5	P40079	357 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	ERV14	P53173	138 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	YDR476C	Q03362	224 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	ARA2	Q04212	335 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	ADH6	Q04894	360 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	RIF2	Q06208	395 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	MDM36	Q06820	579 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	NMD4	Q12129	218 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	UBX3	Q12229	455 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	HIS5	P07172	385 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	SWI5	P08153	709 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	APL3	P38065	1025 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	FAT1	P38225	669 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	ARP1	P38696	384 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	LYS9	P38999	446 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	HMF1	P40037	129 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	TDA2	P40045	126 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	QRI1	P43123	477 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	UBX6	P47049	396 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	BIR1	P47134	954 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	SCY1	P53009	804 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	RPN4	Q03465	531 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	SPO71	Q03868	1245 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	DLT1	Q04216	342 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	APC4	Q04601	652 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	RTT103	Q05543	409 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	REX4	Q08237	289 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	OXR1	Q08952	273 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	SCS22	Q6Q595	175 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	LPD1	P09624	499 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	TOP3	P13099	656 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	PHO85	P17157	305 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	IDP1	P21954	428 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	APS1	P35181	156 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	YRO2	P38079	344 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	RRN10	P38204	145 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	PRE3	P38624	215 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	KIC1	P38692	1080 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	VMA22	P38784	181 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	YIL077C	P40508	320 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	PSA1	P41940	361 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	COQ5	P49017	307 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	RTA1	P53047	317 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	SPC98	P53540	846 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	DUS1	P53759	423 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	NRK1	P53915	240 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	ARP4	P80428	489 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	ARP9	Q05123	467 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	SFH1	Q06168	426 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	THP1	Q08231	455 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	TCO89	Q08921	799 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	SLF1	Q12034	447 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	ATG34	Q12292	412 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	MPD1	Q12404	318 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	IZH4	Q99393	312 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	TIF1	P10081	395 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	HSP60	P19882	572 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	HEM12	P32347	362 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	MUD1	P32605	298 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	MNN9	P39107	395 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	VPS52	P39904	641 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	GDI1	P39958	451 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	GTT3	P39996	337 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	YJL068C	P40363	299 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	MMM1	P41800	426 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	MAF1	P41910	395 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	LSM1	P47017	172 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	YJR039W	P47107	1121 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	MRH4	P53166	561 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	GTR2	P53290	341 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	GCR2	Q01722	534 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	PRM15	Q03262	622 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	GEP3	Q08622	556 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	BUD7	Q08754	746 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	YTM1	Q12024	460 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	YLR053C	Q12026	108 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	ENO1	P00924	437 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	ALG7	P07286	448 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	BIO2	P32451	375 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	FRD1	P32614	470 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	MUD2	P36084	527 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	STB6	P36085	766 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	PET10	P36139	283 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	AMN1	P38285	549 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	GUA1	P38625	525 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	BIM1	P40013	344 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	AVT6	P40074	448 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	GPP2	P40106	250 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	DIM1	P41819	318 aa	Known RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	SKI6	P46948	246 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	BPL1	P48445	690 aa	Predicted RBP	4.04	□□□□□ -1.76
SNF2	YOR290C	GIS4	Q04233	774 aa		4.04	□□□□□ -1.76
SNF2	YOR290C	RPS9A	O13516	197 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	TYR1	P20049	452 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms