RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	TOM22	P49334	152 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	HSH155	P49955	971 aa	Known RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	MRK1	P50873	501 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	PYK2	P52489	506 aa	Known RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	GTF1	P53260	183 aa	Predicted RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	PBP1	P53297	722 aa	Known RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	NOP19	P53317	196 aa	Predicted RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	DSE4	P53753	1117 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	YNL146W	P53906	100 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	ELP3	Q02908	557 aa	Known RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	NAN1	Q02931	896 aa	Known RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	UTP14	Q04500	899 aa	Known RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	PDR8	Q06149	701 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	SPH1	Q06160	661 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	LUC7	Q07508	261 aa	Predicted RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	WHI4	Q07655	649 aa	Known RBP	3.74	□□□□□ -1.81
ABP140	YOR239W	YPL191C	Q08930	360 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	THI21	Q08975	551 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	PUS9	Q12069	462 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	MLH3	Q12083	715 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	REX3	Q12090	404 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	OSW2	Q12202	724 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	PHM7	Q12252	991 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	YOR012W	Q12351	137 aa		3.74	□□□□□ -1.81
ABP140	YOR239W	YLR462W	O13556	202 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	TPK2	P06245	380 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	ARG82	P07250	355 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	MIS1	P09440	975 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	CHS2	P14180	963 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	APA1	P16550	321 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	HPR1	P17629	752 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	APA2	P22108	325 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	HRR25	P29295	494 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	GPI10	P30777	616 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	CYS4	P32582	507 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	YKL100C	P34248	587 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	MRPL37	P36532	105 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	SEA4	P38164	1038 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	ECM13	P38195	257 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YBR137W	P38276	179 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YBR238C	P38330	731 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	YHL049C	P38722	271 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YER184C	P39961	794 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YEL075C	P39972	122 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YER189W	P40104	122 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	CIN5	P40917	295 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YFL064C	P43540	174 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	GUF1	P46943	645 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	HOC1	P47124	396 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
ABP140	YOR239W	SNX41	Q04053	625 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	RQC1	Q05468	723 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	NSE3	Q05541	303 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YLR297W	Q05899	129 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	EST2	Q06163	884 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
ABP140	YOR239W	RCL1	Q08096	367 aa	Predicted RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	SYC1	Q08553	188 aa	Predicted RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	FMP40	Q08968	688 aa	Predicted RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	AKR2	Q12013	749 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YPR063C	Q12160	140 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YPR1	Q12458	312 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	RHO1	P06780	209 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	PET54	P10834	293 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	HOM3	P10869	527 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	WHI2	P12611	486 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	CDC23	P16522	626 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	AMD2	P22580	549 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	CTR86	P25355	563 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	CHA1	P25379	360 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	AAD3	P25612	363 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	SYP1	P25623	870 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	CIN8	P27895	1000 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	NAM9	P27929	486 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	GSH1	P32477	678 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	VHC1	P38329	1120 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	NEM1	P38757	446 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	GIC1	P38785	314 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	PZF1	P39933	429 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	ECM10	P39987	644 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	VHR1	P40522	640 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	PSA1	P41940	361 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	YJL107C	P42947	387 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	AGP3	P43548	558 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	ALR2	P43553	858 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	MNN5	P46982	586 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	RTT101	P47050	842 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	IRC18	P47056	224 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	UBC12	P52491	188 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	TPN1	P53099	579 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YGL117W	P53133	265 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	YGR026W	P53217	278 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	TEP1	P53916	434 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	SVL3	Q03088	825 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	YML131W	Q03102	365 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	PFA5	Q03289	374 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	TRM82	Q03774	444 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	UFO1	Q04511	668 aa		3.73	□□□□□ -1.81
ABP140	YOR239W	ISR1	Q06098	443 aa	Known RBP	3.73	□□□□□ -1.81
ABP140	YOR239W	GMC2	Q06201	188 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms