RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W GAT1P43574 510 aa14.25□□□□□ -0.13
SHR5YOL110W RIF2Q06208 395 aa14.25□□□□□ -0.13
SHR5YOL110W TRM8Q12009 286 aa14.25□□□□□ -0.13
SHR5YOL110W RIM11P38615 370 aa14.24□□□□□ -0.13
SHR5YOL110W TIS11P47977 285 aa14.24□□□□□ -0.13
SHR5YOL110W SNO2P53823 222 aa14.24□□□□□ -0.13
SHR5YOL110W BCH1Q05029 724 aa14.24□□□□□ -0.13
SHR5YOL110W RIB2Q12362 591 aaKnown RBP14.24□□□□□ -0.13
SHR5YOL110W NAG1Q8TGN9 163 aa14.24□□□□□ -0.13
SHR5YOL110W PHO5P00635 467 aa14.23□□□□□ -0.13
SHR5YOL110W CLB1P24868 471 aa14.23□□□□□ -0.13
SHR5YOL110W OXP1P28273 1286 aa14.23□□□□□ -0.13
SHR5YOL110W RFC3P38629 340 aa14.23□□□□□ -0.13
SHR5YOL110W YJL070CP40361 888 aa14.23□□□□□ -0.13
SHR5YOL110W BIR1P47134 954 aa14.23□□□□□ -0.13
SHR5YOL110W GTR2P53290 341 aa14.23□□□□□ -0.13
SHR5YOL110W NOP19P53317 196 aaPredicted RBP14.23□□□□□ -0.13
SHR5YOL110W ZRG17P53735 605 aa14.23□□□□□ -0.13
SHR5YOL110W YPL113CQ02961 396 aa14.23□□□□□ -0.13
SHR5YOL110W FMN1Q03778 218 aa14.23□□□□□ -0.13
SHR5YOL110W GRS2Q06817 618 aa14.23□□□□□ -0.13
SHR5YOL110W ATP11P32453 318 aa14.22□□□□□ -0.13
SHR5YOL110W BAT1P38891 393 aaKnown RBP14.22□□□□□ -0.13
SHR5YOL110W CUS2P53830 285 aaPredicted RBP14.22□□□□□ -0.13
SHR5YOL110W YML131WQ03102 365 aa14.22□□□□□ -0.13
SHR5YOL110W JIP5Q06214 492 aaPredicted RBP14.22□□□□□ -0.13
SHR5YOL110W VPS68Q12016 184 aa14.22□□□□□ -0.13
SHR5YOL110W ATG34Q12292 412 aa14.22□□□□□ -0.13
SHR5YOL110W BEM2P39960 2167 aaKnown RBP14.22□□□□□ -0.13
SHR5YOL110W INH1P01097 85 aa14.21□□□□□ -0.13
SHR5YOL110W CDC21P06785 304 aa14.21□□□□□ -0.13
SHR5YOL110W SWI5P08153 709 aa14.21□□□□□ -0.13
SHR5YOL110W MVD1P32377 396 aaKnown RBP14.21□□□□□ -0.13
SHR5YOL110W NPT1P39683 429 aaKnown RBP14.21□□□□□ -0.13
SHR5YOL110W SPF1P39986 1215 aaKnown RBP14.21□□□□□ -0.13
SHR5YOL110W YER034WP40022 185 aaKnown RBP14.21□□□□□ -0.13
SHR5YOL110W SCS2P40075 244 aaKnown RBP14.21□□□□□ -0.13
SHR5YOL110W HST3P53687 447 aa14.21□□□□□ -0.13
SHR5YOL110W LGE1Q02796 332 aaKnown RBP14.21□□□□□ -0.13
SHR5YOL110W YPL109CQ02981 657 aa14.21□□□□□ -0.13
SHR5YOL110W YMR102CQ03177 834 aa14.21□□□□□ -0.13
SHR5YOL110W RRP36Q12481 300 aaPredicted RBP14.21□□□□□ -0.13
SHR5YOL110W RNA1P11745 407 aaKnown RBP14.2□□□□□ -0.14
SHR5YOL110W GUK1P15454 187 aaKnown RBP14.2□□□□□ -0.14
SHR5YOL110W VPS34P22543 875 aa14.2□□□□□ -0.14
SHR5YOL110W ARG1P22768 420 aa14.2□□□□□ -0.14
SHR5YOL110W RRP3P38712 501 aaKnown RBP14.2□□□□□ -0.14
SHR5YOL110W FRT2P39734 528 aa14.2□□□□□ -0.14
SHR5YOL110W YJR154WP47181 346 aa14.2□□□□□ -0.14
SHR5YOL110W UBP2Q01476 1272 aa14.2□□□□□ -0.14
SHR5YOL110W HEL2Q05580 639 aaKnown RBP14.2□□□□□ -0.14
SHR5YOL110W MET8P15807 274 aa14.19□□□□□ -0.14
SHR5YOL110W YSR3P23501 404 aa14.19□□□□□ -0.14
SHR5YOL110W COX13P32799 129 aa14.19□□□□□ -0.14
SHR5YOL110W GIP4P39732 760 aa14.19□□□□□ -0.14
SHR5YOL110W EMP65P40085 556 aa14.19□□□□□ -0.14
SHR5YOL110W TMA22P47089 198 aaPredicted RBP14.19□□□□□ -0.14
SHR5YOL110W YNL010WP53981 241 aaKnown RBP14.19□□□□□ -0.14
SHR5YOL110W SPC24Q04477 213 aa14.19□□□□□ -0.14
SHR5YOL110W YDL121CQ07541 149 aa14.19□□□□□ -0.14
SHR5YOL110W YLL032CQ07834 825 aaKnown RBP RIP-Chip data14.19□□□□□ -0.14not detected
SHR5YOL110W PST1Q12355 444 aa14.19□□□□□ -0.14
SHR5YOL110W CAR1P00812 333 aaKnown RBP14.18□□□□□ -0.14
SHR5YOL110W TUB1P09733 447 aaKnown RBP14.18□□□□□ -0.14
SHR5YOL110W CRM1P30822 1084 aaKnown RBP14.18□□□□□ -0.14
SHR5YOL110W SPR1P32603 445 aa14.18□□□□□ -0.14
SHR5YOL110W SLX5P32828 619 aaKnown RBP14.18□□□□□ -0.14
SHR5YOL110W YEL073CP39974 107 aa14.18□□□□□ -0.14
SHR5YOL110W GIM4P40005 111 aaKnown RBP14.18□□□□□ -0.14
SHR5YOL110W GTR1Q00582 310 aa14.18□□□□□ -0.14
SHR5YOL110W GAS3Q03655 524 aa14.18□□□□□ -0.14
SHR5YOL110W YLR049CQ12110 428 aa14.18□□□□□ -0.14
SHR5YOL110W COS2P0CX12 379 aa14.17□□□□□ -0.14
SHR5YOL110W COS3P0CX13 379 aa14.17□□□□□ -0.14
SHR5YOL110W BUB2P26448 306 aaPredicted RBP14.17□□□□□ -0.14
SHR5YOL110W RPS1AP33442 255 aaKnown RBP14.17□□□□□ -0.14
SHR5YOL110W SRX1P36077 127 aa14.17□□□□□ -0.14
SHR5YOL110W GIC1P38785 314 aa14.17□□□□□ -0.14
SHR5YOL110W FKH2P41813 862 aa14.17□□□□□ -0.14
SHR5YOL110W COS4P43542 379 aa14.17□□□□□ -0.14
SHR5YOL110W REX2P54964 269 aaKnown RBP14.17□□□□□ -0.14
SHR5YOL110W YML053CQ04978 212 aa14.17□□□□□ -0.14
SHR5YOL110W PLB3Q08108 686 aa14.17□□□□□ -0.14
SHR5YOL110W YDR056CQ12025 205 aa14.17□□□□□ -0.14
SHR5YOL110W TRP3P00937 484 aa14.16□□□□□ -0.14
SHR5YOL110W RAD14P28519 371 aa14.16□□□□□ -0.14
SHR5YOL110W SDH3P33421 198 aa14.16□□□□□ -0.14
SHR5YOL110W SIP2P34164 415 aaKnown RBP14.16□□□□□ -0.14
SHR5YOL110W CAB3P36076 571 aa14.16□□□□□ -0.14
SHR5YOL110W YNL035CP53962 389 aaKnown RBP14.16□□□□□ -0.14
SHR5YOL110W ESA1Q08649 445 aa14.16□□□□□ -0.14
SHR5YOL110W YPL225WQ08971 146 aaKnown RBP14.16□□□□□ -0.14
SHR5YOL110W TFB4Q12004 338 aa14.16□□□□□ -0.14
SHR5YOL110W SPT3P06844 337 aa14.15□□□□□ -0.14
SHR5YOL110W FUM1P08417 488 aaKnown RBP14.15□□□□□ -0.14
SHR5YOL110W PRP6P19735 899 aaPredicted RBP14.15□□□□□ -0.14
SHR5YOL110W YCK2P23292 546 aaKnown RBP14.15□□□□□ -0.14
SHR5YOL110W CIN8P27895 1000 aa14.15□□□□□ -0.14
SHR5YOL110W UBA4P38820 440 aa14.15□□□□□ -0.14
SHR5YOL110W PCF11P39081 626 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms