RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	GLK1	P17709	500 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	YCR099C	P25657	155 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	MSH2	P25847	964 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	ZIP1	P31111	875 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	PTM1	P32857	523 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	ADD66	P36040	267 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	POL12	P38121	705 aa	Predicted RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	HSE1	P38753	452 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	MTW1	P39731	289 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	UFE1	P41834	346 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	BST1	P43571	1029 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	ALB1	P47019	175 aa	Predicted RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	VPS25	P47142	202 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	PRP24	P49960	444 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	NUP84	P52891	726 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YNR063W	P53749	607 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	PRO2	P54885	456 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	LSM3	P57743	89 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	ARP4	P80428	489 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	MET14	Q02196	202 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	RPM2	Q02773	1202 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	TFB3	Q03290	321 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	DYN3	Q04949	312 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	MRI1	Q06489	411 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	SNX3	Q08826	162 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	YOR289W	Q12012	251 aa	Predicted RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	SLF1	Q12034	447 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	UPC2	Q12151	913 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	RUP1	Q12242	671 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	NDJ1	Q12366	352 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	RMD5	Q12508	421 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YLR149C	Q99296	730 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	CAR1	P00812	333 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	TRP3	P00937	484 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	ATP1	P07251	545 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	SEC53	P07283	254 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	TUB1	P09733	447 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	RED1	P14291	827 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YAK1	P14680	807 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	PEX1	P24004	1043 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	DCC1	P25559	380 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YCR090C	P25654	182 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	ITR2	P30606	609 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	PYC2	P32327	1180 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	AFR1	P33304	620 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	AST1	P35183	429 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	TFA2	P36145	328 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	MNN2	P38069	597 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YRO2	P38079	344 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	KTR4	P38131	464 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	ALG3	P38179	458 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	ECM13	P38195	257 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YBL029W	P38201	376 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YER137C	P40083	148 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	YFL052W	P43551	465 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	AGX1	P43567	385 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	RET2	P43621	546 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YJL055W	P47044	245 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	NNF1	P47149	201 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	DAN4	P47179	1161 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YJR154W	P47181	346 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	AMA1	P50082	593 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YNL010W	P53981	241 aa	Known RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	RSC4	Q02206	625 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	PET117	Q02771	107 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YDR131C	Q03899	556 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	RIF2	Q06208	395 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	HDA3	Q06623	655 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	LDB18	Q07887	179 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	YEH2	Q07950	538 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	ESA1	Q08649	445 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	NUS1	Q12063	375 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	MRH1	Q12117	320 aa	Predicted RBP	4.62	□□□□□ -1.67
SSB2	YNL209W	YBL113C	Q7M4S9	792 aa		4.62	□□□□□ -1.67
SSB2	YNL209W	NMT1	P14743	455 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	PHO3	P24031	467 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	CLB4	P24871	460 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	YSP3	P25036	478 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	NPL6	P32832	435 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	SSO1	P32867	290 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	GRS1	P38088	690 aa	Known RBP	4.61	□□□□□ -1.67
SSB2	YNL209W	MNN1	P39106	762 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	SEC28	P40509	296 aa	Known RBP	4.61	□□□□□ -1.67
SSB2	YNL209W	GCN20	P43535	752 aa	Known RBP	4.61	□□□□□ -1.67
SSB2	YNL209W	FMP33	P46998	180 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	NOP9	P47077	666 aa	Known RBP	4.61	□□□□□ -1.67
SSB2	YNL209W	CSN12	P47130	423 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	IMD4	P50094	524 aa	Known RBP	4.61	□□□□□ -1.67
SSB2	YNL209W	STR3	P53101	465 aa	Known RBP	4.61	□□□□□ -1.67
SSB2	YNL209W	YTP1	P53584	459 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	YPL034W	Q03083	165 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	EMI2	Q04409	500 aa	Known RBP	4.61	□□□□□ -1.67
SSB2	YNL209W	SYO1	Q07395	620 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SSB2	YNL209W	ADF1	Q2V2Q1	113 aa		4.61	□□□□□ -1.67
SSB2	YNL209W	YMR084W	A2P2R3	262 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	HIP1	P06775	603 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	MST1	P07236	462 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	ABF1	P14164	731 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	SFP1	P32432	683 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms