RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A RAD16P31244 790 aa3.74□□□□□ -1.81
YSF3YNL138W-A MSS51P32335 436 aa3.74□□□□□ -1.81
YSF3YNL138W-A XRS2P33301 854 aa3.74□□□□□ -1.81
YSF3YNL138W-A PSY4P38193 441 aa3.74□□□□□ -1.81
YSF3YNL138W-A YJL107CP42947 387 aa3.74□□□□□ -1.81
YSF3YNL138W-A GAT1P43574 510 aa3.74□□□□□ -1.81
YSF3YNL138W-A PSP1P50896 841 aaKnown RBP3.74□□□□□ -1.81
YSF3YNL138W-A TMA64Q04600 565 aaKnown RBP3.74□□□□□ -1.81
YSF3YNL138W-A PDR8Q06149 701 aa3.74□□□□□ -1.81
YSF3YNL138W-A SWA2Q06677 668 aa3.74□□□□□ -1.81
YSF3YNL138W-A PSR2Q07949 397 aa3.74□□□□□ -1.81
YSF3YNL138W-A GEP3Q08622 556 aa3.74□□□□□ -1.81
YSF3YNL138W-A TRM8Q12009 286 aa3.74□□□□□ -1.81
YSF3YNL138W-A YER145C-AA0A023PYF4 145 aa3.73□□□□□ -1.81
YSF3YNL138W-A SNF1P06782 633 aaKnown RBP3.73□□□□□ -1.81
YSF3YNL138W-A YER190C-BP0CX94 160 aa3.73□□□□□ -1.81
YSF3YNL138W-A YEL077W-AP0CX95 160 aa3.73□□□□□ -1.81
YSF3YNL138W-A YGR296C-BP0CX96 160 aa3.73□□□□□ -1.81
YSF3YNL138W-A YPL283W-BP0CX97 160 aa3.73□□□□□ -1.81
YSF3YNL138W-A YPR204C-AP0CX98 160 aa3.73□□□□□ -1.81
YSF3YNL138W-A PRD1P25375 712 aa3.73□□□□□ -1.81
YSF3YNL138W-A ADE17P38009 592 aaKnown RBP3.73□□□□□ -1.81
YSF3YNL138W-A UBP13P38187 747 aa3.73□□□□□ -1.81
YSF3YNL138W-A PHO88P38264 188 aaPredicted RBP3.73□□□□□ -1.81
YSF3YNL138W-A ARN1P38731 627 aa3.73□□□□□ -1.81
YSF3YNL138W-A ALD5P40047 520 aaKnown RBP3.73□□□□□ -1.81
YSF3YNL138W-A CFD1P40558 293 aa3.73□□□□□ -1.81
YSF3YNL138W-A RGT2Q12300 763 aa3.73□□□□□ -1.81
YSF3YNL138W-A MSB2P32334 1306 aa3.72□□□□□ -1.81
YSF3YNL138W-A TRX2P22803 104 aaKnown RBP3.72□□□□□ -1.81
YSF3YNL138W-A TKL1P23254 680 aaKnown RBP3.72□□□□□ -1.81
YSF3YNL138W-A YCR006CP25350 157 aa3.72□□□□□ -1.81
YSF3YNL138W-A TEF4P36008 412 aaKnown RBP3.72□□□□□ -1.81
YSF3YNL138W-A REG2P38232 338 aa3.72□□□□□ -1.81
YSF3YNL138W-A PSD1P39006 500 aa3.72□□□□□ -1.81
YSF3YNL138W-A ASG1P40467 964 aa3.72□□□□□ -1.81
YSF3YNL138W-A MNT3P40549 630 aa3.72□□□□□ -1.81
YSF3YNL138W-A ASE1P50275 885 aa3.72□□□□□ -1.81
YSF3YNL138W-A REG1Q00816 1014 aa3.72□□□□□ -1.81
YSF3YNL138W-A VID22Q05934 901 aa3.72□□□□□ -1.81
YSF3YNL138W-A ECM22Q05958 814 aaPredicted RBP3.72□□□□□ -1.81
YSF3YNL138W-A MMR1Q06324 491 aa3.72□□□□□ -1.81
YSF3YNL138W-A CRN1Q06440 651 aa3.72□□□□□ -1.81
YSF3YNL138W-A HER1Q12276 1246 aa3.72□□□□□ -1.81
YSF3YNL138W-A ICT1Q12385 394 aa3.72□□□□□ -1.81
YSF3YNL138W-A RRI1Q12468 440 aa3.72□□□□□ -1.81
YSF3YNL138W-A SAM2P19358 384 aaKnown RBP3.71□□□□□ -1.82
YSF3YNL138W-A SRP54P20424 541 aaKnown RBP3.71□□□□□ -1.82
YSF3YNL138W-A CNA1P23287 553 aa3.71□□□□□ -1.82
YSF3YNL138W-A ERG8P24521 451 aa3.71□□□□□ -1.82
YSF3YNL138W-A TMT1P32643 299 aa3.71□□□□□ -1.82
YSF3YNL138W-A MCR1P36060 302 aaKnown RBP3.71□□□□□ -1.82
YSF3YNL138W-A SLX1P38324 304 aa3.71□□□□□ -1.82
YSF3YNL138W-A UME6P39001 836 aa3.71□□□□□ -1.82
YSF3YNL138W-A PHM8P40025 321 aa3.71□□□□□ -1.82
YSF3YNL138W-A MOB1P40484 314 aa3.71□□□□□ -1.82
YSF3YNL138W-A IST3P40565 148 aaPredicted RBP3.71□□□□□ -1.82
YSF3YNL138W-A SNM1P40993 198 aa3.71□□□□□ -1.82
YSF3YNL138W-A SWP82P43554 623 aa3.71□□□□□ -1.82
YSF3YNL138W-A SOL4P53315 255 aa3.71□□□□□ -1.82
YSF3YNL138W-A DCP2P53550 970 aaKnown RBP3.71□□□□□ -1.82
YSF3YNL138W-A SPH1Q06160 661 aa3.71□□□□□ -1.82
YSF3YNL138W-A SKG3Q06315 1026 aa3.71□□□□□ -1.82
YSF3YNL138W-A RTT109Q07794 436 aa3.71□□□□□ -1.82
YSF3YNL138W-A YAP7Q08182 245 aa3.71□□□□□ -1.82
YSF3YNL138W-A MCH4Q08268 501 aa3.71□□□□□ -1.82
YSF3YNL138W-A RRI2Q12348 645 aa3.71□□□□□ -1.82
YSF3YNL138W-A RRD2Q12461 358 aa3.71□□□□□ -1.82
YSF3YNL138W-A YPR089WO13585 888 aa3.7□□□□□ -1.82
YSF3YNL138W-A GPA1P08539 472 aa3.7□□□□□ -1.82
YSF3YNL138W-A APE1P14904 514 aa3.7□□□□□ -1.82
YSF3YNL138W-A GUK1P15454 187 aaKnown RBP3.7□□□□□ -1.82
YSF3YNL138W-A CHS3P29465 1165 aa3.7□□□□□ -1.82
YSF3YNL138W-A CNS1P33313 385 aa3.7□□□□□ -1.82
YSF3YNL138W-A SLC1P33333 303 aa3.7□□□□□ -1.82
YSF3YNL138W-A RFS1P38234 210 aaKnown RBP3.7□□□□□ -1.82
YSF3YNL138W-A AXL2P38928 823 aa3.7□□□□□ -1.82
YSF3YNL138W-A YMR124WP39523 943 aaKnown RBP3.7□□□□□ -1.82
YSF3YNL138W-A IML2P47031 731 aa3.7□□□□□ -1.82
YSF3YNL138W-A RPS7BP48164 190 aaKnown RBP3.7□□□□□ -1.82
YSF3YNL138W-A YGL036WP53185 909 aaPredicted RBP3.7□□□□□ -1.82
YSF3YNL138W-A YNR061CP53747 219 aa3.7□□□□□ -1.82
YSF3YNL138W-A RPL15BP54780 204 aaPredicted RBP3.7□□□□□ -1.82
YSF3YNL138W-A YML131WQ03102 365 aa3.7□□□□□ -1.82
YSF3YNL138W-A FRE3Q08905 711 aa3.7□□□□□ -1.82
YSF3YNL138W-A YLR302CO13544 120 aa3.69□□□□□ -1.82
YSF3YNL138W-A PET111P08468 800 aa3.69□□□□□ -1.82
YSF3YNL138W-A MRP2P10663 115 aaPredicted RBP3.69□□□□□ -1.82
YSF3YNL138W-A SRB5P32585 307 aa3.69□□□□□ -1.82
YSF3YNL138W-A RAD24P32641 659 aa3.69□□□□□ -1.82
YSF3YNL138W-A NTR2P36118 322 aaPredicted RBP3.69□□□□□ -1.82
YSF3YNL138W-A PXL1P36166 706 aa3.69□□□□□ -1.82
YSF3YNL138W-A SCO2P38072 301 aa3.69□□□□□ -1.82
YSF3YNL138W-A YPT35P38815 214 aaKnown RBP3.69□□□□□ -1.82
YSF3YNL138W-A VPS41P38959 992 aa3.69□□□□□ -1.82
YSF3YNL138W-A TPA1P40032 644 aaKnown RBP3.69□□□□□ -1.82
YSF3YNL138W-A PFK26P40433 827 aaKnown RBP3.69□□□□□ -1.82
YSF3YNL138W-A PCI8P40512 444 aa3.69□□□□□ -1.82
YSF3YNL138W-A YPT11P48559 417 aa3.69□□□□□ -1.82
YSF3YNL138W-A YNL144CP53907 740 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms