RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	ARR1	Q06596	294 aa		1.35	□□□□□ -2.19
CLU1	YMR012W	IWR1	Q07532	353 aa	Predicted RBP	1.35	□□□□□ -2.19
CLU1	YMR012W	HBT1	Q07653	1046 aa	Known RBP	1.35	□□□□□ -2.19
CLU1	YMR012W	PSR2	Q07949	397 aa		1.35	□□□□□ -2.19
CLU1	YMR012W	AIM41	Q12032	185 aa		1.35	□□□□□ -2.19
CLU1	YMR012W	RPN5	Q12250	445 aa	Known RBP	1.35	□□□□□ -2.19
CLU1	YMR012W	IPP1	P00817	287 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	RPP0	P05317	312 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	RPS14A	P06367	137 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	ARD1	P07347	238 aa	Predicted RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	SEC12	P11655	471 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	YIM1	P28625	365 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	MCM4	P30665	933 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	HSP104	P31539	908 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	ADH5	P38113	351 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	RRT2	P38332	387 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	RPS14B	P39516	138 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	AIM10	P39965	576 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	SIT1	P39980	628 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	EMP65	P40085	556 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	PRM2	P40534	656 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	BPL1	P48445	690 aa	Predicted RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	DSE4	P53753	1117 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	RSM24	Q03976	319 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	PPM1	Q04081	328 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	PDS5	Q04264	1277 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	VPS38	Q05919	439 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	PSY3	Q12318	242 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	SWI1	P09547	1314 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	MES1	P00958	751 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	GAL4	P04386	881 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	SUP35	P05453	685 aa	Known RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	BOS1	P25385	244 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	EMC1	P25574	760 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	COT1	P32798	439 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	MDL2	P33311	773 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	CDS1	P38221	457 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	LYS9	P38999	446 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	GET2	P40056	285 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	IST3	P40565	148 aa	Predicted RBP	1.34	□□□□□ -2.19
CLU1	YMR012W	OPT1	P40897	799 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	PTR3	P43606	678 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	PET130	P47065	347 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	ALT1	P52893	592 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	SKO1	Q02100	647 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	YDR179W-A	Q03983	463 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	IRC13	Q08630	104 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	SOG2	Q08817	791 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	YDR215C	Q12240	137 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	CEX1	Q12453	761 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	DFG16	Q99234	619 aa		1.34	□□□□□ -2.19
CLU1	YMR012W	HIP1	P06775	603 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	ARO3	P14843	370 aa	Known RBP	1.34	□□□□□ -2.2
CLU1	YMR012W	RNR1	P21524	888 aa	Known RBP	1.34	□□□□□ -2.2
CLU1	YMR012W	PHO84	P25297	587 aa	Known RBP	1.34	□□□□□ -2.2
CLU1	YMR012W	LDB16	P25587	256 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	ADK2	P26364	225 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	DEG1	P31115	442 aa	Known RBP	1.34	□□□□□ -2.2
CLU1	YMR012W	TUL1	P36096	758 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	YSW1	P38280	609 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	SLX1	P38324	304 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	SMF1	P38925	575 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	TCB2	P48231	1178 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	YNL134C	P53912	376 aa	Known RBP	1.34	□□□□□ -2.2
CLU1	YMR012W	YVC1	Q12324	675 aa		1.34	□□□□□ -2.2
CLU1	YMR012W	SCH9	P11792	824 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	PDA1	P16387	420 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	SFA1	P32771	386 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	TCD2	P36101	447 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	LRP1	P38801	184 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	1.33	□□□□□ -2.2	not detected
CLU1	YMR012W	SAP1	P39955	897 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	IRC5	P43610	853 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	ROK1	P45818	564 aa	Predicted RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	AQR1	P53943	586 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	RTN1	Q04947	295 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	MRD1	Q06106	887 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	YLR455W	Q06188	304 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	BTS1	Q12051	335 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	TMS1	Q12116	473 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	ZRT2	Q12436	422 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	ERG27	Q12452	347 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	SPO24	Q3E752	67 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	PRP8	P33334	2413 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	SPS100	P13130	326 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	POX1	P13711	748 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	CLB3	P24870	427 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	AFG1	P32317	509 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	RIM1	P32445	135 aa	Known RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	VPS41	P38959	992 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	ALG5	P40350	334 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	IME4	P41833	600 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	HXT16	P47185	567 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	YGR111W	P53265	400 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	TOF1	P53840	1238 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	CSI1	Q04368	295 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	CRN1	Q06440	651 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	Q0010	Q9ZZX9	128 aa		1.33	□□□□□ -2.2
CLU1	YMR012W	CDC36	P06100	191 aa	Predicted RBP	1.33	□□□□□ -2.2
CLU1	YMR012W	PDC5	P16467	563 aa	Known RBP	1.33	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms