RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C CTF3Q12748 733 aa3.39□□□□□ -1.87
VPS9YML097C ISN1Q99312 450 aa3.39□□□□□ -1.87
VPS9YML097C YER145C-AA0A023PYF4 145 aa3.38□□□□□ -1.87
VPS9YML097C AQY1P0CD91 305 aa3.38□□□□□ -1.87
VPS9YML097C RRP7P25368 297 aaPredicted RBP3.38□□□□□ -1.87
VPS9YML097C BOS1P25385 244 aa3.38□□□□□ -1.87
VPS9YML097C MGM1P32266 881 aa3.38□□□□□ -1.87
VPS9YML097C YMC1P32331 307 aa3.38□□□□□ -1.87
VPS9YML097C MSS51P32335 436 aa3.38□□□□□ -1.87
VPS9YML097C HXT3P32466 567 aaKnown RBP3.38□□□□□ -1.87
VPS9YML097C YBL055CP34220 418 aaPredicted RBP3.38□□□□□ -1.87
VPS9YML097C HCS1P34243 683 aa3.38□□□□□ -1.87
VPS9YML097C RPL32P38061 130 aaKnown RBP3.38□□□□□ -1.87
VPS9YML097C MSR1P38714 643 aa3.38□□□□□ -1.87
VPS9YML097C PHM8P40025 321 aa3.38□□□□□ -1.87
VPS9YML097C TDA10P42938 290 aa3.38□□□□□ -1.87
VPS9YML097C CUL3P53202 744 aa3.38□□□□□ -1.87
VPS9YML097C EMI2Q04409 500 aaKnown RBP3.38□□□□□ -1.87
VPS9YML097C RBS1Q05672 457 aaKnown RBP3.38□□□□□ -1.87
VPS9YML097C RAD34Q06665 692 aa3.38□□□□□ -1.87
VPS9YML097C ULA1Q12059 462 aa3.38□□□□□ -1.87
VPS9YML097C NFI1Q12216 726 aa3.38□□□□□ -1.87
VPS9YML097C SEC39Q12745 709 aa3.38□□□□□ -1.87
VPS9YML097C YMR084WA2P2R3 262 aa3.38□□□□□ -1.87
VPS9YML097C CHO1P08456 276 aa3.38□□□□□ -1.87
VPS9YML097C SRV2P17555 526 aaKnown RBP3.38□□□□□ -1.87
VPS9YML097C PRD1P25375 712 aa3.38□□□□□ -1.87
VPS9YML097C BUD14P27637 709 aa3.38□□□□□ -1.87
VPS9YML097C EMP70P32802 667 aa3.38□□□□□ -1.87
VPS9YML097C RPC34P32910 317 aa3.38□□□□□ -1.87
VPS9YML097C TUL1P36096 758 aa3.38□□□□□ -1.87
VPS9YML097C YHR054CP38780 354 aa3.38□□□□□ -1.87
VPS9YML097C POP2P39008 433 aa3.38□□□□□ -1.87
VPS9YML097C STU2P46675 888 aa3.38□□□□□ -1.87
VPS9YML097C STB2P46679 850 aa3.38□□□□□ -1.87
VPS9YML097C SMC3P47037 1230 aa3.38□□□□□ -1.87
VPS9YML097C YTP1P53584 459 aa3.38□□□□□ -1.87
VPS9YML097C RSM23Q01163 450 aa3.38□□□□□ -1.87
VPS9YML097C FMP30Q02883 468 aa3.38□□□□□ -1.87
VPS9YML097C KAP120Q02932 1032 aa3.38□□□□□ -1.87
VPS9YML097C FIN1Q03898 291 aa3.38□□□□□ -1.87
VPS9YML097C COQ9Q05779 260 aa3.38□□□□□ -1.87
VPS9YML097C VTA1Q06263 330 aa3.38□□□□□ -1.87
VPS9YML097C SIL1Q08199 421 aa3.38□□□□□ -1.87
VPS9YML097C VPS54Q12071 889 aa3.38□□□□□ -1.87
VPS9YML097C FRE6Q12473 712 aa3.38□□□□□ -1.87
VPS9YML097C ADE5,7P07244 802 aaKnown RBP3.37□□□□□ -1.87
VPS9YML097C TKL1P23254 680 aaKnown RBP3.37□□□□□ -1.87
VPS9YML097C CPR2P23285 205 aa3.37□□□□□ -1.87
VPS9YML097C GAC1P28006 793 aa3.37□□□□□ -1.87
VPS9YML097C NUP133P36161 1157 aa3.37□□□□□ -1.87
VPS9YML097C RRT2P38332 387 aa3.37□□□□□ -1.87
VPS9YML097C TSC10P38342 320 aa3.37□□□□□ -1.87
VPS9YML097C ERV46P39727 415 aa3.37□□□□□ -1.87
VPS9YML097C YIL166CP40445 542 aa3.37□□□□□ -1.87
VPS9YML097C CAK1P43568 368 aaPredicted RBP3.37□□□□□ -1.87
VPS9YML097C BUD27P43573 796 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
VPS9YML097C YVH1Q02256 364 aaKnown RBP3.37□□□□□ -1.87
VPS9YML097C TMN2Q04562 672 aa3.37□□□□□ -1.87
VPS9YML097C RSF1Q05043 376 aa3.37□□□□□ -1.87
VPS9YML097C HEL2Q05580 639 aaKnown RBP3.37□□□□□ -1.87
VPS9YML097C YDL057WQ07379 328 aa3.37□□□□□ -1.87
VPS9YML097C RTT109Q07794 436 aa3.37□□□□□ -1.87
VPS9YML097C SPE3Q12074 293 aaKnown RBP3.37□□□□□ -1.87
VPS9YML097C HIF1Q12373 385 aa3.37□□□□□ -1.87
VPS9YML097C YDL007C-AQ2V2Q0 85 aa3.37□□□□□ -1.87
VPS9YML097C CYB2P00175 591 aa3.36□□□□□ -1.87
VPS9YML097C SPO11P23179 398 aa3.36□□□□□ -1.87
VPS9YML097C YME2P32843 850 aa3.36□□□□□ -1.87
VPS9YML097C RPS0AP32905 252 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C SEC66P33754 206 aa3.36□□□□□ -1.87
VPS9YML097C THI2P38141 450 aa3.36□□□□□ -1.87
VPS9YML097C FTH1P38310 465 aa3.36□□□□□ -1.87
VPS9YML097C IMD2P38697 523 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C RPN11P43588 306 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C SAE2P46946 345 aa3.36□□□□□ -1.87
VPS9YML097C APT1P49435 187 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C IMD3P50095 523 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C ERG26P53199 349 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C DUG3P53871 357 aa3.36□□□□□ -1.87
VPS9YML097C YMR178WQ03219 274 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C SNU56Q03782 492 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C CDC45Q08032 650 aa3.36□□□□□ -1.87
VPS9YML097C CUE5Q08412 411 aaKnown RBP3.36□□□□□ -1.87
VPS9YML097C DCI1Q08558 271 aa3.36□□□□□ -1.87
VPS9YML097C RPS10AQ08745 105 aaPredicted RBP3.36□□□□□ -1.87
VPS9YML097C PGC1Q08959 321 aa3.36□□□□□ -1.87
VPS9YML097C PUS9Q12069 462 aa3.36□□□□□ -1.87
VPS9YML097C CFT2Q12102 859 aaPredicted RBP3.36□□□□□ -1.87
VPS9YML097C ARG81P05085 880 aa3.35□□□□□ -1.87
VPS9YML097C TPM1P17536 199 aaKnown RBP3.35□□□□□ -1.87
VPS9YML097C CLC1P17891 233 aa3.35□□□□□ -1.87
VPS9YML097C TRX1P22217 103 aaKnown RBP3.35□□□□□ -1.87
VPS9YML097C KRR1P25586 316 aaPredicted RBP3.35□□□□□ -1.87
VPS9YML097C SAC1P32368 623 aaKnown RBP3.35□□□□□ -1.87
VPS9YML097C RPN2P32565 945 aaKnown RBP3.35□□□□□ -1.87
VPS9YML097C RML2P32611 393 aa3.35□□□□□ -1.87
VPS9YML097C YKL100CP34248 587 aa3.35□□□□□ -1.87
VPS9YML097C NTC20P38302 140 aaPredicted RBP3.35□□□□□ -1.87
VPS9YML097C CIN4P39110 191 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms