RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	RPA49	Q01080	415 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS71	YML041C	YMR178W	Q03219	274 aa	Known RBP	4.57	□□□□□ -1.68
VPS71	YML041C	TAP42	Q04372	366 aa		4.57	□□□□□ -1.68
VPS71	YML041C	RPS10A	Q08745	105 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS71	YML041C	YRF1-4	O13559	1382 aa		4.56	□□□□□ -1.68
VPS71	YML041C	EST1	P17214	699 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS71	YML041C	TPM1	P17536	199 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	ART10	P18634	518 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	BUD5	P25300	642 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS71	YML041C	SAC1	P32368	623 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	PUP2	P32379	260 aa		4.56	□□□□□ -1.68
VPS71	YML041C	PMT1	P33775	817 aa		4.56	□□□□□ -1.68
VPS71	YML041C	SEF1	P34228	1148 aa		4.56	□□□□□ -1.68
VPS71	YML041C	GCS1	P35197	352 aa		4.56	□□□□□ -1.68
VPS71	YML041C	CMC1	P36064	111 aa		4.56	□□□□□ -1.68
VPS71	YML041C	STB6	P36085	766 aa		4.56	□□□□□ -1.68
VPS71	YML041C	ARN1	P38731	627 aa		4.56	□□□□□ -1.68
VPS71	YML041C	YJL107C	P42947	387 aa		4.56	□□□□□ -1.68
VPS71	YML041C	STU2	P46675	888 aa		4.56	□□□□□ -1.68
VPS71	YML041C	RPS10B	P46784	105 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	SGF73	P53165	657 aa		4.56	□□□□□ -1.68
VPS71	YML041C	ERG26	P53199	349 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	YNL144C	P53907	740 aa		4.56	□□□□□ -1.68
VPS71	YML041C	YDR239C	Q03780	787 aa		4.56	□□□□□ -1.68
VPS71	YML041C	ERB1	Q04660	807 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	RBS1	Q05672	457 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	ADE13	Q05911	482 aa	Known RBP	4.56	□□□□□ -1.68
VPS71	YML041C	PDR8	Q06149	701 aa		4.56	□□□□□ -1.68
VPS71	YML041C	PDA1	P16387	420 aa	Known RBP	4.55	□□□□□ -1.68
VPS71	YML041C	MNE1	P24720	663 aa		4.55	□□□□□ -1.68
VPS71	YML041C	CLB1	P24868	471 aa		4.55	□□□□□ -1.68
VPS71	YML041C	YCR051W	P25631	222 aa		4.55	□□□□□ -1.68
VPS71	YML041C	YBL055C	P34220	418 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS71	YML041C	MTR2	P34232	184 aa	Known RBP	4.55	□□□□□ -1.68
VPS71	YML041C	FLO10	P36170	1169 aa		4.55	□□□□□ -1.68
VPS71	YML041C	SEC28	P40509	296 aa	Known RBP	4.55	□□□□□ -1.68
VPS71	YML041C	DOT5	P40553	215 aa		4.55	□□□□□ -1.68
VPS71	YML041C	MAF1	P41910	395 aa		4.55	□□□□□ -1.68
VPS71	YML041C	LYS20	P48570	428 aa	Known RBP	4.55	□□□□□ -1.68
VPS71	YML041C	ORC5	P50874	479 aa		4.55	□□□□□ -1.68
VPS71	YML041C	YGR127W	P53275	312 aa		4.55	□□□□□ -1.68
VPS71	YML041C	YTP1	P53584	459 aa		4.55	□□□□□ -1.68
VPS71	YML041C	DPB4	Q04603	196 aa	Known RBP	4.55	□□□□□ -1.68
VPS71	YML041C	AIM32	Q04689	311 aa		4.55	□□□□□ -1.68
VPS71	YML041C	VTA1	Q06263	330 aa		4.55	□□□□□ -1.68
VPS71	YML041C	NCE102	Q12207	173 aa	RIP-Chip data	4.55	□□□□□ -1.68	not detected
VPS71	YML041C	PDH1	Q12428	516 aa	Known RBP	4.55	□□□□□ -1.68
VPS71	YML041C	BI2	P03873	423 aa		4.54	□□□□□ -1.68
VPS71	YML041C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
VPS71	YML041C	SPE2	P21182	396 aa		4.54	□□□□□ -1.68
VPS71	YML041C	SPO11	P23179	398 aa		4.54	□□□□□ -1.68
VPS71	YML041C	BOS1	P25385	244 aa		4.54	□□□□□ -1.68
VPS71	YML041C	ILV6	P25605	309 aa	Known RBP	4.54	□□□□□ -1.68
VPS71	YML041C	IMG1	P25626	169 aa		4.54	□□□□□ -1.68
VPS71	YML041C	URA7	P28274	579 aa	Known RBP	4.54	□□□□□ -1.68
VPS71	YML041C	MIA40	P36046	403 aa		4.54	□□□□□ -1.68
VPS71	YML041C	HOT13	P36078	116 aa		4.54	□□□□□ -1.68
VPS71	YML041C	ALG5	P40350	334 aa		4.54	□□□□□ -1.68
VPS71	YML041C	TAX4	P47030	604 aa		4.54	□□□□□ -1.68
VPS71	YML041C	BNI5	P53890	448 aa	Known RBP	4.54	□□□□□ -1.68
VPS71	YML041C	PEX25	Q02969	394 aa		4.54	□□□□□ -1.68
VPS71	YML041C	ARX1	Q03862	593 aa	Known RBP	4.54	□□□□□ -1.68
VPS71	YML041C	FRE3	Q08905	711 aa		4.54	□□□□□ -1.68
VPS71	YML041C	YOR389W	Q08912	624 aa		4.54	□□□□□ -1.68
VPS71	YML041C	PAR32	Q12515	295 aa	Known RBP	4.54	□□□□□ -1.68
VPS71	YML041C	APE1	P14904	514 aa		4.53	□□□□□ -1.68
VPS71	YML041C	CPR2	P23285	205 aa		4.53	□□□□□ -1.68
VPS71	YML041C	YCR006C	P25350	157 aa		4.53	□□□□□ -1.68
VPS71	YML041C	GAC1	P28006	793 aa		4.53	□□□□□ -1.68
VPS71	YML041C	LEU5	P38702	357 aa		4.53	□□□□□ -1.68
VPS71	YML041C	HXT14	P42833	540 aa		4.53	□□□□□ -1.68
VPS71	YML041C	BPL1	P48445	690 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS71	YML041C	IPI3	P53877	555 aa		4.53	□□□□□ -1.68
VPS71	YML041C	FMP30	Q02883	468 aa		4.53	□□□□□ -1.68
VPS71	YML041C	PFA5	Q03289	374 aa		4.53	□□□□□ -1.68
VPS71	YML041C	IRC3	Q06683	689 aa		4.53	□□□□□ -1.68
VPS71	YML041C	TEN1	Q07921	160 aa		4.53	□□□□□ -1.68
VPS71	YML041C	MCH4	Q08268	501 aa		4.53	□□□□□ -1.68
VPS71	YML041C	SLK19	Q08581	821 aa	Known RBP	4.53	□□□□□ -1.68
VPS71	YML041C	OSW1	Q08692	278 aa		4.53	□□□□□ -1.68
VPS71	YML041C	APL4	Q12028	832 aa		4.53	□□□□□ -1.68
VPS71	YML041C	FRE7	Q12333	620 aa		4.53	□□□□□ -1.68
VPS71	YML041C	PUT2	P07275	575 aa		4.52	□□□□□ -1.69
VPS71	YML041C	RAP1	P11938	827 aa		4.52	□□□□□ -1.69
VPS71	YML041C	NAT1	P12945	854 aa	Known RBP	4.52	□□□□□ -1.69
VPS71	YML041C	APN1	P22936	367 aa		4.52	□□□□□ -1.69
VPS71	YML041C	MBR1	P23493	339 aa		4.52	□□□□□ -1.69
VPS71	YML041C	SWH1	P35845	1188 aa		4.52	□□□□□ -1.69
VPS71	YML041C	UBA4	P38820	440 aa		4.52	□□□□□ -1.69
VPS71	YML041C	HXT9	P40885	567 aa		4.52	□□□□□ -1.69
VPS71	YML041C	STB2	P46679	850 aa		4.52	□□□□□ -1.69
VPS71	YML041C	DLD2	P46681	530 aa	Known RBP	4.52	□□□□□ -1.69
VPS71	YML041C	PYK2	P52489	506 aa	Known RBP	4.52	□□□□□ -1.69
VPS71	YML041C	OAZ1	Q02803	292 aa		4.52	□□□□□ -1.69
VPS71	YML041C	SNU56	Q03782	492 aa	Known RBP	4.52	□□□□□ -1.69
VPS71	YML041C	EMI2	Q04409	500 aa	Known RBP	4.52	□□□□□ -1.69
VPS71	YML041C	COQ9	Q05779	260 aa		4.52	□□□□□ -1.69
VPS71	YML041C	PGC1	Q08959	321 aa		4.52	□□□□□ -1.69
VPS71	YML041C	SMF3	Q12078	473 aa	Predicted RBP	4.52	□□□□□ -1.69
VPS71	YML041C	YDL007C-A	Q2V2Q0	85 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 87.5 ms