RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	FMO1	P38866	432 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	ACO2	P39533	789 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	RGI2	P40188	164 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	THI6	P41835	540 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	TFG2	P41896	400 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	QRI7	P43122	407 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	ALK1	P43633	760 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	AIM24	P47127	394 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	YJR154W	P47181	346 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	PRP24	P49960	444 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	TIM21	P53220	239 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	ART5	P53244	586 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	PDR16	P53860	351 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	CWC27	Q02770	301 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	PET117	Q02771	107 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	YDC1	Q02896	317 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	BNA7	Q04066	261 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	MFB1	Q04922	465 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	PNP1	Q05788	311 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	DIA2	Q08496	732 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	UIP4	Q08926	304 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	NUR1	Q12066	484 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	RPN5	Q12250	445 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	PCD1	Q12524	340 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	UTP10	P42945	1769 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	YGL041W-A	P0C5N3	154 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	CBS1	P14066	229 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	GFA1	P14742	717 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	SWI4	P25302	1093 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	IMG2	P25642	146 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	ADK2	P26364	225 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	SPO23	P33757	523 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	SEC72	P39742	193 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	FAA4	P47912	694 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	SGF73	P53165	657 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	VOA1	P53262	265 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	SLI1	P53304	468 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	NGL3	Q03210	505 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	PEX29	Q03370	554 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	TFC6	Q06339	672 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	TCO89	Q08921	799 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	MET17	P06106	444 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	SPT3	P06844	337 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	RPL4A	P10664	362 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	PCK1	P10963	549 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	FRS1	P15624	595 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	PFK1	P16861	987 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	TEC1	P18412	486 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	HOP1	P20050	605 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	KKQ8	P36004	724 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	MCD4	P36051	919 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	RIP-Chip
SEC39	YLR440C	FIG1	P38224	298 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	MSS4	P38994	779 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	SER3	P40054	469 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	ERG10	P41338	398 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	RPL4B	P49626	362 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	AMA1	P50082	593 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	SEH1	P53011	349 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	MRM2	P53123	320 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	RPT4	P53549	437 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	ARE2	P53629	642 aa	Known RBP	4.97	□□□□□ -1.61
SEC39	YLR440C	CTF19	Q02732	369 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	SLD5	Q03406	294 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	AIM32	Q04689	311 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	HDA3	Q06623	655 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	TAF10	Q12030	206 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	HUA2	Q12134	243 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	INP53	Q12271	1107 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	RPN6	Q12377	434 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	YLR278C	Q05854	1341 aa		4.97	□□□□□ -1.61
SEC39	YLR440C	GPH1	P06738	902 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	DCD1	P06773	312 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	RNR2	P09938	399 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	CDC23	P16522	626 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	ARG8	P18544	423 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	AAT2	P23542	418 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	RNA15	P25299	296 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	RHB1	P25378	209 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	MLS1	P30952	554 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	PGM1	P33401	570 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	ALY1	P36117	915 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	MAL32	P38158	584 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	AME1	P38313	324 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SEC39	YLR440C	TDA11	P38854	504 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	CCT6	P39079	546 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	GVP36	P40531	326 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	YAP5	P40574	245 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	FAR7	P43592	221 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	RPS7B	P48164	190 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	PUS4	P48567	403 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	PSP1	P50896	841 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	CUL3	P53202	744 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	YGR053C	P53234	283 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	MAL12	P53341	584 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	MMT1	Q03218	510 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	NGL2	Q03264	515 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	YDR248C	Q03786	193 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	CRF1	Q04930	467 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms