RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W ENT4Q07872 247 aa3.78□□□□□ -1.8
SMD2YLR275W YEH2Q07950 538 aa3.78□□□□□ -1.8
SMD2YLR275W FUM1P08417 488 aaKnown RBP3.77□□□□□ -1.81
SMD2YLR275W CMK1P27466 446 aaKnown RBP3.77□□□□□ -1.81
SMD2YLR275W AGP2P38090 596 aa3.77□□□□□ -1.81
SMD2YLR275W ARC1P46672 376 aaKnown RBP3.77□□□□□ -1.81
SMD2YLR275W RTS3P53289 263 aa3.77□□□□□ -1.81
SMD2YLR275W RSM23Q01163 450 aa3.77□□□□□ -1.81
SMD2YLR275W YMR160WQ03823 816 aa3.77□□□□□ -1.81
SMD2YLR275W RTT109Q07794 436 aa3.77□□□□□ -1.81
SMD2YLR275W TEN1Q07921 160 aa3.77□□□□□ -1.81
SMD2YLR275W SSP2Q08646 371 aa3.77□□□□□ -1.81
SMD2YLR275W TCO89Q08921 799 aa3.77□□□□□ -1.81
SMD2YLR275W YBR298C-AQ8TGK4 73 aa3.77□□□□□ -1.81
SMD2YLR275W MRS3P10566 314 aa3.76□□□□□ -1.81
SMD2YLR275W PRE8P23639 250 aa3.76□□□□□ -1.81
SMD2YLR275W RER1P25560 188 aa3.76□□□□□ -1.81
SMD2YLR275W LAG1P38703 411 aa3.76□□□□□ -1.81
SMD2YLR275W RTS1P38903 757 aa3.76□□□□□ -1.81
SMD2YLR275W DHH1P39517 506 aaKnown RBP3.76□□□□□ -1.81
SMD2YLR275W YGL082WP53155 381 aa3.76□□□□□ -1.81
SMD2YLR275W BSC5P53755 489 aa3.76□□□□□ -1.81
SMD2YLR275W RBA50Q04418 439 aa3.76□□□□□ -1.81
SMD2YLR275W ETT1Q08421 412 aaKnown RBP3.76□□□□□ -1.81
SMD2YLR275W SKM1Q12469 655 aa3.76□□□□□ -1.81
SMD2YLR275W CDC24P11433 854 aaPredicted RBP3.75□□□□□ -1.81
SMD2YLR275W YTA12P40341 825 aa3.75□□□□□ -1.81
SMD2YLR275W IMP4P53941 290 aaKnown RBP3.75□□□□□ -1.81
SMD2YLR275W YVH1Q02256 364 aaKnown RBP3.75□□□□□ -1.81
SMD2YLR275W RAD30Q04049 632 aa3.75□□□□□ -1.81
SMD2YLR275W DPB4Q04603 196 aaKnown RBP3.75□□□□□ -1.81
SMD2YLR275W DIC1Q06143 298 aa3.75□□□□□ -1.81
SMD2YLR275W VIP1Q06685 1146 aaKnown RBP3.75□□□□□ -1.81
SMD2YLR275W PPT2Q12036 173 aa3.75□□□□□ -1.81
SMD2YLR275W PDH1Q12428 516 aaKnown RBP3.75□□□□□ -1.81
SMD2YLR275W RPS2P25443 254 aaKnown RBP3.74□□□□□ -1.81
SMD2YLR275W YKL100CP34248 587 aa3.74□□□□□ -1.81
SMD2YLR275W MAL33P38157 468 aa3.74□□□□□ -1.81
SMD2YLR275W MDM31P38880 579 aa3.74□□□□□ -1.81
SMD2YLR275W DPH1P40487 425 aaKnown RBP3.74□□□□□ -1.81
SMD2YLR275W IKS1P47042 667 aa3.74□□□□□ -1.81
SMD2YLR275W LYS4P49367 693 aaPredicted RBP3.74□□□□□ -1.81
SMD2YLR275W SMM1P53720 384 aaKnown RBP3.74□□□□□ -1.81
SMD2YLR275W SAM50P53969 484 aa3.74□□□□□ -1.81
SMD2YLR275W YPL014WQ02606 381 aa3.74□□□□□ -1.81
SMD2YLR275W CYB2P00175 591 aa3.73□□□□□ -1.81
SMD2YLR275W SEC62P21825 274 aa3.73□□□□□ -1.81
SMD2YLR275W BUD5P25300 642 aaPredicted RBP3.73□□□□□ -1.81
SMD2YLR275W VPS17P32913 551 aa3.73□□□□□ -1.81
SMD2YLR275W MTR2P34232 184 aaKnown RBP3.73□□□□□ -1.81
SMD2YLR275W ECM15P35195 104 aa3.73□□□□□ -1.81
SMD2YLR275W YNK1P36010 153 aaKnown RBP3.73□□□□□ -1.81
SMD2YLR275W KRE9P39005 276 aa3.73□□□□□ -1.81
SMD2YLR275W PTR3P43606 678 aa3.73□□□□□ -1.81
SMD2YLR275W YGR127WP53275 312 aa3.73□□□□□ -1.81
SMD2YLR275W EFM6P53970 246 aa3.73□□□□□ -1.81
SMD2YLR275W YSA1Q01976 231 aa3.73□□□□□ -1.81
SMD2YLR275W HCR1Q05775 265 aaKnown RBP3.73□□□□□ -1.81
SMD2YLR275W THI20Q08224 551 aa3.73□□□□□ -1.81
SMD2YLR275W PRP16P15938 1071 aaPredicted RBP3.72□□□□□ -1.81
SMD2YLR275W TRX2P22803 104 aaKnown RBP3.72□□□□□ -1.81
SMD2YLR275W SYN8P31377 255 aa3.72□□□□□ -1.81
SMD2YLR275W ROK1P45818 564 aaPredicted RBP3.72□□□□□ -1.81
SMD2YLR275W FAR3P46671 204 aa3.72□□□□□ -1.81
SMD2YLR275W DUG3P53871 357 aa3.72□□□□□ -1.81
SMD2YLR275W RHO4Q00246 291 aa3.72□□□□□ -1.81
SMD2YLR275W RPM2Q02773 1202 aa3.72□□□□□ -1.81
SMD2YLR275W CDC45Q08032 650 aa3.72□□□□□ -1.81
SMD2YLR275W KGD1P20967 1014 aaKnown RBP3.71□□□□□ -1.82
SMD2YLR275W PUP3P25451 205 aaKnown RBP3.71□□□□□ -1.82
SMD2YLR275W BUD14P27637 709 aa3.71□□□□□ -1.82
SMD2YLR275W LOS1P33418 1100 aaPredicted RBP3.71□□□□□ -1.82
SMD2YLR275W YBL055CP34220 418 aaPredicted RBP3.71□□□□□ -1.82
SMD2YLR275W AUR1P36107 401 aaPredicted RBP3.71□□□□□ -1.82
SMD2YLR275W YMR087WQ04299 284 aa3.71□□□□□ -1.82
SMD2YLR275W YMR018WQ04364 514 aa3.71□□□□□ -1.82
SMD2YLR275W OPY2Q06810 360 aa3.71□□□□□ -1.82
SMD2YLR275W SDH5Q08230 162 aa3.71□□□□□ -1.82
SMD2YLR275W RPL15AP05748 204 aaKnown RBP3.7□□□□□ -1.82
SMD2YLR275W ARD1P07347 238 aaPredicted RBP3.7□□□□□ -1.82
SMD2YLR275W RPL19AP0CX82 189 aaKnown RBP3.7□□□□□ -1.82
SMD2YLR275W RPL19BP0CX83 189 aaPredicted RBP3.7□□□□□ -1.82
SMD2YLR275W BOS1P25385 244 aa3.7□□□□□ -1.82
SMD2YLR275W IMG1P25626 169 aa3.7□□□□□ -1.82
SMD2YLR275W CPR3P25719 182 aa3.7□□□□□ -1.82
SMD2YLR275W DPB3P27344 201 aa3.7□□□□□ -1.82
SMD2YLR275W NUP133P36161 1157 aa3.7□□□□□ -1.82
SMD2YLR275W ICS2P38284 255 aa3.7□□□□□ -1.82
SMD2YLR275W GLO2Q05584 274 aa3.7□□□□□ -1.82
SMD2YLR275W YPL272CQ08984 517 aa3.7□□□□□ -1.82
SMD2YLR275W MF(ALPHA)1P01149 165 aa3.69□□□□□ -1.82
SMD2YLR275W MTF1P14908 341 aaKnown RBP3.69□□□□□ -1.82
SMD2YLR275W YIH1P25637 258 aa3.69□□□□□ -1.82
SMD2YLR275W NDC1P32500 655 aa3.69□□□□□ -1.82
SMD2YLR275W PTR2P32901 601 aa3.69□□□□□ -1.82
SMD2YLR275W SIP2P34164 415 aaKnown RBP3.69□□□□□ -1.82
SMD2YLR275W YKL023WP36103 277 aaKnown RBP3.69□□□□□ -1.82
SMD2YLR275W RPL32P38061 130 aaKnown RBP3.69□□□□□ -1.82
SMD2YLR275W YHR218WP38899 603 aa3.69□□□□□ -1.82
SMD2YLR275W CSM2P40465 213 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms