RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W RER1P25560 188 aa2.4□□□□□ -2.03
SEC22YLR268W CMK1P27466 446 aaKnown RBP2.4□□□□□ -2.03
SEC22YLR268W GEX2P36173 615 aa2.4□□□□□ -2.03
SEC22YLR268W AXL2P38928 823 aa2.4□□□□□ -2.03
SEC22YLR268W YTA12P40341 825 aa2.4□□□□□ -2.03
SEC22YLR268W PFK26P40433 827 aaKnown RBP2.4□□□□□ -2.03
SEC22YLR268W PKP1P40530 394 aa2.4□□□□□ -2.03
SEC22YLR268W RPR2P40571 144 aa2.4□□□□□ -2.03
SEC22YLR268W AXL1P40851 1208 aa2.4□□□□□ -2.03
SEC22YLR268W IDP2P41939 412 aa2.4□□□□□ -2.03
SEC22YLR268W YFR016CP43597 1233 aaKnown RBP2.4□□□□□ -2.03
SEC22YLR268W MSS11Q03825 758 aa2.4□□□□□ -2.03
SEC22YLR268W ATG26Q06321 1198 aa2.4□□□□□ -2.03
SEC22YLR268W OPY2Q06810 360 aa2.4□□□□□ -2.03
SEC22YLR268W NBP2Q12163 236 aa2.4□□□□□ -2.03
SEC22YLR268W VCX1Q99385 411 aa2.4□□□□□ -2.03
SEC22YLR268W SOD1P00445 154 aaKnown RBP2.39□□□□□ -2.03
SEC22YLR268W ACH1P32316 526 aa2.39□□□□□ -2.03
SEC22YLR268W CBF2P32504 956 aa2.39□□□□□ -2.03
SEC22YLR268W DPB11P47027 764 aaPredicted RBP2.39□□□□□ -2.03
SEC22YLR268W YGL039WP53183 348 aaKnown RBP2.39□□□□□ -2.03
SEC22YLR268W SOL4P53315 255 aa2.39□□□□□ -2.03
SEC22YLR268W SNO4Q04902 237 aa2.39□□□□□ -2.03
SEC22YLR268W PAL1Q05518 499 aaKnown RBP2.39□□□□□ -2.03
SEC22YLR268W SSK1Q07084 712 aa2.39□□□□□ -2.03
SEC22YLR268W HSP33Q08914 237 aaKnown RBP2.39□□□□□ -2.03
SEC22YLR268W HSP32Q08992 237 aa2.39□□□□□ -2.03
SEC22YLR268W NUS1Q12063 375 aa2.39□□□□□ -2.03
SEC22YLR268W RPB2P08518 1224 aaKnown RBP2.38□□□□□ -2.03
SEC22YLR268W NAT1P12945 854 aaKnown RBP2.38□□□□□ -2.03
SEC22YLR268W TYR1P20049 452 aa2.38□□□□□ -2.03
SEC22YLR268W ERG8P24521 451 aa2.38□□□□□ -2.03
SEC22YLR268W SNC1P31109 117 aa2.38□□□□□ -2.03
SEC22YLR268W ATS1P31386 333 aa2.38□□□□□ -2.03
SEC22YLR268W MCM10P32354 571 aa2.38□□□□□ -2.03
SEC22YLR268W MRP20P32387 263 aa2.38□□□□□ -2.03
SEC22YLR268W NDC1P32500 655 aa2.38□□□□□ -2.03
SEC22YLR268W PTR2P32901 601 aa2.38□□□□□ -2.03
SEC22YLR268W VPS17P32913 551 aa2.38□□□□□ -2.03
SEC22YLR268W PSD1P39006 500 aa2.38□□□□□ -2.03
SEC22YLR268W VPS4P52917 437 aa2.38□□□□□ -2.03
SEC22YLR268W PKP2P53170 491 aa2.38□□□□□ -2.03
SEC22YLR268W MEP3P53390 489 aa2.38□□□□□ -2.03
SEC22YLR268W CBK1P53894 756 aa2.38□□□□□ -2.03
SEC22YLR268W SUB1P54000 292 aaKnown RBP2.38□□□□□ -2.03
SEC22YLR268W RCO1Q04779 684 aa2.38□□□□□ -2.03
SEC22YLR268W PSK2Q08217 1101 aa2.38□□□□□ -2.03
SEC22YLR268W NKP1Q12493 238 aa2.38□□□□□ -2.03
SEC22YLR268W SEC62P21825 274 aa2.37□□□□□ -2.03
SEC22YLR268W PRS1P32895 427 aaKnown RBP2.37□□□□□ -2.03
SEC22YLR268W SDT1P53078 280 aa2.37□□□□□ -2.03
SEC22YLR268W YDL121CQ07541 149 aa2.37□□□□□ -2.03
SEC22YLR268W GRC3Q07845 632 aa2.37□□□□□ -2.03
SEC22YLR268W CDC45Q08032 650 aa2.37□□□□□ -2.03
SEC22YLR268W YOR019WQ99248 730 aa2.37□□□□□ -2.03
SEC22YLR268W FUM1P08417 488 aaKnown RBP2.36□□□□□ -2.03
SEC22YLR268W CHS3P29465 1165 aa2.36□□□□□ -2.03
SEC22YLR268W SPC110P32380 944 aa2.36□□□□□ -2.03
SEC22YLR268W KTR3P38130 404 aaPredicted RBP2.36□□□□□ -2.03
SEC22YLR268W ROT2P38138 954 aa2.36□□□□□ -2.03
SEC22YLR268W VID27P40157 782 aa2.36□□□□□ -2.03
SEC22YLR268W DPH1P40487 425 aaKnown RBP2.36□□□□□ -2.03
SEC22YLR268W IME4P41833 600 aa2.36□□□□□ -2.03
SEC22YLR268W BTN2P53286 410 aa2.36□□□□□ -2.03
SEC22YLR268W BSC5P53755 489 aa2.36□□□□□ -2.03
SEC22YLR268W SVL3Q03088 825 aaKnown RBP2.36□□□□□ -2.03
SEC22YLR268W YMR160WQ03823 816 aa2.36□□□□□ -2.03
SEC22YLR268W RBA50Q04418 439 aa2.36□□□□□ -2.03
SEC22YLR268W SKM1Q12469 655 aa2.36□□□□□ -2.03
SEC22YLR268W YOL087CQ99247 1116 aa2.36□□□□□ -2.03
SEC22YLR268W YBR085C-AO43137 85 aa2.35□□□□□ -2.03
SEC22YLR268W ARG81P05085 880 aa2.35□□□□□ -2.03
SEC22YLR268W SNF3P10870 884 aa2.35□□□□□ -2.03
SEC22YLR268W PMR1P13586 950 aa2.35□□□□□ -2.03
SEC22YLR268W PRE8P23639 250 aa2.35□□□□□ -2.03
SEC22YLR268W SPR1P32603 445 aa2.35□□□□□ -2.03
SEC22YLR268W MSN2P33748 704 aa2.35□□□□□ -2.03
SEC22YLR268W ALY1P36117 915 aa2.35□□□□□ -2.03
SEC22YLR268W UIP3P39547 235 aa2.35□□□□□ -2.03
SEC22YLR268W FMP10P40098 244 aa2.35□□□□□ -2.03
SEC22YLR268W SLZ1P40167 298 aa2.35□□□□□ -2.03
SEC22YLR268W SEC24P40482 926 aaKnown RBP2.35□□□□□ -2.03
SEC22YLR268W ARC1P46672 376 aaKnown RBP2.35□□□□□ -2.03
SEC22YLR268W AAD10P47182 288 aa2.35□□□□□ -2.03
SEC22YLR268W YNR061CP53747 219 aa2.35□□□□□ -2.03
SEC22YLR268W SAM50P53969 484 aa2.35□□□□□ -2.03
SEC22YLR268W MUB1Q03162 620 aa2.35□□□□□ -2.03
SEC22YLR268W EMI2Q04409 500 aaKnown RBP2.35□□□□□ -2.03
SEC22YLR268W SKG3Q06315 1026 aa2.35□□□□□ -2.03
SEC22YLR268W MHR1Q06630 226 aa2.35□□□□□ -2.03
SEC22YLR268W BUD21Q08492 214 aaPredicted RBP2.35□□□□□ -2.03
SEC22YLR268W INP53Q12271 1107 aa2.35□□□□□ -2.03
SEC22YLR268W PDH1Q12428 516 aaKnown RBP2.35□□□□□ -2.03
SEC22YLR268W CAR1P00812 333 aaKnown RBP2.34□□□□□ -2.03
SEC22YLR268W CDC16P09798 840 aa2.34□□□□□ -2.03
SEC22YLR268W CDC24P11433 854 aaPredicted RBP2.34□□□□□ -2.03
SEC22YLR268W GFD2P25370 566 aaKnown RBP2.34□□□□□ -2.03
SEC22YLR268W DBP8P38719 431 aa2.34□□□□□ -2.03
SEC22YLR268W UBA4P38820 440 aa2.34□□□□□ -2.03
SEC22YLR268W SIP4P46954 829 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms