RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C DBP8P38719 431 aa2.85□□□□□ -1.95
AFB1YLR040C RTS1P38903 757 aa2.85□□□□□ -1.95
AFB1YLR040C AXL1P40851 1208 aa2.85□□□□□ -1.95
AFB1YLR040C DIA3P52290 468 aa2.85□□□□□ -1.95
AFB1YLR040C ERG26P53199 349 aaKnown RBP2.85□□□□□ -1.95
AFB1YLR040C BSC5P53755 489 aa2.85□□□□□ -1.95
AFB1YLR040C TDA7P53882 636 aaPredicted RBP2.85□□□□□ -1.95
AFB1YLR040C FMP45Q07651 309 aa2.85□□□□□ -1.95
AFB1YLR040C TEN1Q07921 160 aa2.85□□□□□ -1.95
AFB1YLR040C TCO89Q08921 799 aa2.85□□□□□ -1.95
AFB1YLR040C ARG81P05085 880 aa2.84□□□□□ -1.95
AFB1YLR040C KAR3P17119 729 aa2.84□□□□□ -1.95
AFB1YLR040C VMA16P23968 213 aa2.84□□□□□ -1.95
AFB1YLR040C ATS1P31386 333 aa2.84□□□□□ -1.95
AFB1YLR040C AUR1P36107 401 aaPredicted RBP2.84□□□□□ -1.95
AFB1YLR040C MIC60P36112 540 aa2.84□□□□□ -1.95
AFB1YLR040C YJL068CP40363 299 aa2.84□□□□□ -1.95
AFB1YLR040C ARC1P46672 376 aaKnown RBP2.84□□□□□ -1.95
AFB1YLR040C GIS2P53849 153 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
AFB1YLR040C CRZ1P53968 678 aa2.84□□□□□ -1.95
AFB1YLR040C YMR087WQ04299 284 aa2.84□□□□□ -1.95
AFB1YLR040C RBA50Q04418 439 aa2.84□□□□□ -1.95
AFB1YLR040C DPB4Q04603 196 aaKnown RBP2.84□□□□□ -1.95
AFB1YLR040C RTT103Q05543 409 aa2.84□□□□□ -1.95
AFB1YLR040C DIC1Q06143 298 aa2.84□□□□□ -1.95
AFB1YLR040C SKM1Q12469 655 aa2.84□□□□□ -1.95
AFB1YLR040C RPL19AP0CX82 189 aaKnown RBP2.83□□□□□ -1.96
AFB1YLR040C RPL19BP0CX83 189 aaPredicted RBP2.83□□□□□ -1.96
AFB1YLR040C CDC24P11433 854 aaPredicted RBP2.83□□□□□ -1.96
AFB1YLR040C YCK1P23291 538 aa2.83□□□□□ -1.96
AFB1YLR040C ADH7P25377 361 aa2.83□□□□□ -1.96
AFB1YLR040C SNC1P31109 117 aa2.83□□□□□ -1.96
AFB1YLR040C LAG1P38703 411 aa2.83□□□□□ -1.96
AFB1YLR040C KRE9P39005 276 aa2.83□□□□□ -1.96
AFB1YLR040C LYS14P40971 790 aa2.83□□□□□ -1.96
AFB1YLR040C EFM6P53970 246 aa2.83□□□□□ -1.96
AFB1YLR040C MSC1Q03104 513 aa2.83□□□□□ -1.96
AFB1YLR040C MSS11Q03825 758 aa2.83□□□□□ -1.96
AFB1YLR040C YKU80Q04437 629 aa2.83□□□□□ -1.96
AFB1YLR040C SSK1Q07084 712 aa2.83□□□□□ -1.96
AFB1YLR040C SPE4Q12455 300 aa2.83□□□□□ -1.96
AFB1YLR040C ARP6Q12509 438 aa2.83□□□□□ -1.96
AFB1YLR040C ARD1P07347 238 aaPredicted RBP2.82□□□□□ -1.96
AFB1YLR040C MCM10P32354 571 aa2.82□□□□□ -1.96
AFB1YLR040C MUD2P36084 527 aaKnown RBP2.82□□□□□ -1.96
AFB1YLR040C AGP2P38090 596 aa2.82□□□□□ -1.96
AFB1YLR040C DHH1P39517 506 aaKnown RBP2.82□□□□□ -1.96
AFB1YLR040C YEL068CP39977 110 aa2.82□□□□□ -1.96
AFB1YLR040C DIM1P41819 318 aaKnown RBP2.82□□□□□ -1.96
AFB1YLR040C LCL3P53153 274 aa2.82□□□□□ -1.96
AFB1YLR040C SMM1P53720 384 aaKnown RBP2.82□□□□□ -1.96
AFB1YLR040C SAM50P53969 484 aa2.82□□□□□ -1.96
AFB1YLR040C YVH1Q02256 364 aaKnown RBP2.82□□□□□ -1.96
AFB1YLR040C YPL014WQ02606 381 aa2.82□□□□□ -1.96
AFB1YLR040C YEH2Q07950 538 aa2.82□□□□□ -1.96
AFB1YLR040C THI20Q08224 551 aa2.82□□□□□ -1.96
AFB1YLR040C PRP16P15938 1071 aaPredicted RBP2.81□□□□□ -1.96
AFB1YLR040C BUD5P25300 642 aaPredicted RBP2.81□□□□□ -1.96
AFB1YLR040C PUP3P25451 205 aaKnown RBP2.81□□□□□ -1.96
AFB1YLR040C POL4P25615 582 aa2.81□□□□□ -1.96
AFB1YLR040C LOS1P33418 1100 aaPredicted RBP2.81□□□□□ -1.96
AFB1YLR040C NUP133P36161 1157 aa2.81□□□□□ -1.96
AFB1YLR040C PTR3P43606 678 aa2.81□□□□□ -1.96
AFB1YLR040C IKS1P47042 667 aa2.81□□□□□ -1.96
AFB1YLR040C BUD32P53323 261 aa2.81□□□□□ -1.96
AFB1YLR040C RPM2Q02773 1202 aa2.81□□□□□ -1.96
AFB1YLR040C YMR160WQ03823 816 aa2.81□□□□□ -1.96
AFB1YLR040C SCW10Q04951 389 aa2.81□□□□□ -1.96
AFB1YLR040C NCE102Q12207 173 aaRIP-Chip data2.81□□□□□ -1.96not detected
AFB1YLR040C YBR298C-AQ8TGK4 73 aa2.81□□□□□ -1.96
AFB1YLR040C CDC16P09798 840 aa2.8□□□□□ -1.96
AFB1YLR040C TYR1P20049 452 aa2.8□□□□□ -1.96
AFB1YLR040C PRE8P23639 250 aa2.8□□□□□ -1.96
AFB1YLR040C CMK1P27466 446 aaKnown RBP2.8□□□□□ -1.96
AFB1YLR040C CHS3P29465 1165 aa2.8□□□□□ -1.96
AFB1YLR040C PRO3P32263 286 aaKnown RBP2.8□□□□□ -1.96
AFB1YLR040C SSH4P32343 579 aa2.8□□□□□ -1.96
AFB1YLR040C YBL055CP34220 418 aaPredicted RBP2.8□□□□□ -1.96
AFB1YLR040C UBP11P36026 717 aa2.8□□□□□ -1.96
AFB1YLR040C DUG3P53871 357 aa2.8□□□□□ -1.96
AFB1YLR040C NGL3Q03210 505 aa2.8□□□□□ -1.96
AFB1YLR040C RPC11Q04307 110 aaPredicted RBP2.8□□□□□ -1.96
AFB1YLR040C YMR018WQ04364 514 aa2.8□□□□□ -1.96
AFB1YLR040C HCR1Q05775 265 aaKnown RBP2.8□□□□□ -1.96
AFB1YLR040C OPY2Q06810 360 aa2.8□□□□□ -1.96
AFB1YLR040C LUC7Q07508 261 aaPredicted RBP2.8□□□□□ -1.96
AFB1YLR040C RPL15AP05748 204 aaKnown RBP2.79□□□□□ -1.96
AFB1YLR040C SEC62P21825 274 aa2.79□□□□□ -1.96
AFB1YLR040C BOS1P25385 244 aa2.79□□□□□ -1.96
AFB1YLR040C IMG1P25626 169 aa2.79□□□□□ -1.96
AFB1YLR040C SSE2P32590 693 aaKnown RBP2.79□□□□□ -1.96
AFB1YLR040C VPS17P32913 551 aa2.79□□□□□ -1.96
AFB1YLR040C SIP2P34164 415 aaKnown RBP2.79□□□□□ -1.96
AFB1YLR040C YBR144CP34215 104 aa2.79□□□□□ -1.96
AFB1YLR040C YKL100CP34248 587 aa2.79□□□□□ -1.96
AFB1YLR040C ECM15P35195 104 aa2.79□□□□□ -1.96
AFB1YLR040C RPL32P38061 130 aaKnown RBP2.79□□□□□ -1.96
AFB1YLR040C ICS2P38284 255 aa2.79□□□□□ -1.96
AFB1YLR040C APT1P49435 187 aaKnown RBP2.79□□□□□ -1.96
AFB1YLR040C DUO1P53168 247 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms