RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C ROK1P45818 564 aaPredicted RBP2.38□□□□□ -2.03
SHE2YKL130C STR3P53101 465 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C YGL036WP53185 909 aaPredicted RBP2.38□□□□□ -2.03
SHE2YKL130C IST1P53843 298 aaPredicted RBP2.38□□□□□ -2.03
SHE2YKL130C YML037CQ03703 340 aa2.38□□□□□ -2.03
SHE2YKL130C BUD22Q04347 519 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C GPN2Q08726 347 aaPredicted RBP2.38□□□□□ -2.03
SHE2YKL130C TIP41Q12199 356 aa2.38□□□□□ -2.03
SHE2YKL130C PGA3Q12746 312 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C SRP54P20424 541 aaKnown RBP2.37□□□□□ -2.03
SHE2YKL130C ADH7P25377 361 aa2.37□□□□□ -2.03
SHE2YKL130C YBR139WP38109 508 aa2.37□□□□□ -2.03
SHE2YKL130C SRO77P38163 1010 aa2.37□□□□□ -2.03
SHE2YKL130C VID24P38263 362 aa2.37□□□□□ -2.03
SHE2YKL130C DIA4P38705 446 aaPredicted RBP2.37□□□□□ -2.03
SHE2YKL130C AFG3P39925 761 aa2.37□□□□□ -2.03
SHE2YKL130C BUR6P40096 142 aa2.37□□□□□ -2.03
SHE2YKL130C MET18P40469 1032 aa2.37□□□□□ -2.03
SHE2YKL130C MET28P40573 187 aa2.37□□□□□ -2.03
SHE2YKL130C SWP82P43554 623 aa2.37□□□□□ -2.03
SHE2YKL130C VPS25P47142 202 aa2.37□□□□□ -2.03
SHE2YKL130C VID30P53076 958 aa2.37□□□□□ -2.03
SHE2YKL130C ADE16P54113 591 aaKnown RBP2.37□□□□□ -2.03
SHE2YKL130C RSM28Q03430 361 aa2.37□□□□□ -2.03
SHE2YKL130C YLR281CQ05863 155 aa2.37□□□□□ -2.03
SHE2YKL130C RIM20Q12033 661 aa2.37□□□□□ -2.03
SHE2YKL130C GRX6Q12438 231 aa2.37□□□□□ -2.03
SHE2YKL130C SPE4Q12455 300 aa2.37□□□□□ -2.03
SHE2YKL130C YPT6Q99260 215 aa2.37□□□□□ -2.03
SHE2YKL130C MF(ALPHA)1P01149 165 aa2.36□□□□□ -2.03
SHE2YKL130C ARD1P07347 238 aaPredicted RBP2.36□□□□□ -2.03
SHE2YKL130C PCT1P13259 424 aa2.36□□□□□ -2.03
SHE2YKL130C SPE2P21182 396 aa2.36□□□□□ -2.03
SHE2YKL130C OPI1P21957 404 aa2.36□□□□□ -2.03
SHE2YKL130C CLB3P24870 427 aa2.36□□□□□ -2.03
SHE2YKL130C GSH1P32477 678 aa2.36□□□□□ -2.03
SHE2YKL130C CST26P38226 397 aa2.36□□□□□ -2.03
SHE2YKL130C OTU2P38747 307 aaKnown RBP2.36□□□□□ -2.03
SHE2YKL130C LRP1P38801 184 aaKnown RBP2.36□□□□□ -2.03
SHE2YKL130C SMF1P38925 575 aa2.36□□□□□ -2.03
SHE2YKL130C DHH1P39517 506 aaKnown RBP2.36□□□□□ -2.03
SHE2YKL130C UIP3P39547 235 aa2.36□□□□□ -2.03
SHE2YKL130C YEL057CP39983 233 aa2.36□□□□□ -2.03
SHE2YKL130C YND1P40009 630 aa2.36□□□□□ -2.03
SHE2YKL130C YJL068CP40363 299 aa2.36□□□□□ -2.03
SHE2YKL130C PKP1P40530 394 aa2.36□□□□□ -2.03
SHE2YKL130C FAR3P46671 204 aa2.36□□□□□ -2.03
SHE2YKL130C CTK2P46962 323 aa2.36□□□□□ -2.03
SHE2YKL130C DPB11P47027 764 aaPredicted RBP2.36□□□□□ -2.03
SHE2YKL130C SMC3P47037 1230 aa2.36□□□□□ -2.03
SHE2YKL130C LYS4P49367 693 aaPredicted RBP2.36□□□□□ -2.03
SHE2YKL130C DIA3P52290 468 aa2.36□□□□□ -2.03
SHE2YKL130C LCL3P53153 274 aa2.36□□□□□ -2.03
SHE2YKL130C NNF2P53253 936 aa2.36□□□□□ -2.03
SHE2YKL130C JJJ1P53863 590 aa2.36□□□□□ -2.03
SHE2YKL130C ZDS2P54786 942 aa2.36□□□□□ -2.03
SHE2YKL130C VPS9P54787 451 aa2.36□□□□□ -2.03
SHE2YKL130C FMP42Q04991 504 aa2.36□□□□□ -2.03
SHE2YKL130C VPS38Q05919 439 aa2.36□□□□□ -2.03
SHE2YKL130C LUC7Q07508 261 aaPredicted RBP2.36□□□□□ -2.03
SHE2YKL130C LEA1Q08963 238 aaPredicted RBP2.36□□□□□ -2.03
SHE2YKL130C FMP40Q08968 688 aaPredicted RBP2.36□□□□□ -2.03
SHE2YKL130C YPL272CQ08984 517 aa2.36□□□□□ -2.03
SHE2YKL130C ISA2Q12425 185 aa2.36□□□□□ -2.03
SHE2YKL130C AVL9Q12500 764 aa2.36□□□□□ -2.03
SHE2YKL130C DNA2P38859 1522 aa2.36□□□□□ -2.03
SHE2YKL130C KOG1P38873 1557 aa2.36□□□□□ -2.03
SHE2YKL130C REC107P21651 314 aa2.35□□□□□ -2.03
SHE2YKL130C PTC6P25646 442 aa2.35□□□□□ -2.03
SHE2YKL130C GPI10P30777 616 aa2.35□□□□□ -2.03
SHE2YKL130C SSE2P32590 693 aaKnown RBP2.35□□□□□ -2.03
SHE2YKL130C SEF1P34228 1148 aa2.35□□□□□ -2.03
SHE2YKL130C BZZ1P38822 633 aa2.35□□□□□ -2.03
SHE2YKL130C CCT6P39079 546 aa2.35□□□□□ -2.03
SHE2YKL130C ECM10P39987 644 aa2.35□□□□□ -2.03
SHE2YKL130C DOT5P40553 215 aa2.35□□□□□ -2.03
SHE2YKL130C SSU1P41930 458 aa2.35□□□□□ -2.03
SHE2YKL130C RPS7BP48164 190 aaKnown RBP2.35□□□□□ -2.03
SHE2YKL130C YGR127WP53275 312 aa2.35□□□□□ -2.03
SHE2YKL130C YGR250CP53316 781 aaKnown RBP2.35□□□□□ -2.03
SHE2YKL130C OGG1P53397 376 aaPredicted RBP2.35□□□□□ -2.03
SHE2YKL130C EFM6P53970 246 aa2.35□□□□□ -2.03
SHE2YKL130C ERO1Q03103 563 aa2.35□□□□□ -2.03
SHE2YKL130C RMT2Q03305 412 aa2.35□□□□□ -2.03
SHE2YKL130C YDR239CQ03780 787 aa2.35□□□□□ -2.03
SHE2YKL130C FIN1Q03898 291 aa2.35□□□□□ -2.03
SHE2YKL130C YDR131CQ03899 556 aa2.35□□□□□ -2.03
SHE2YKL130C THI3Q07471 609 aa2.35□□□□□ -2.03
SHE2YKL130C ETT1Q08421 412 aaKnown RBP2.35□□□□□ -2.03
SHE2YKL130C ATG29Q12092 213 aa2.35□□□□□ -2.03
SHE2YKL130C INP53Q12271 1107 aa2.35□□□□□ -2.03
SHE2YKL130C TCB3Q03640 1545 aaKnown RBP2.34□□□□□ -2.03
SHE2YKL130C GAL80P04387 435 aa2.34□□□□□ -2.03
SHE2YKL130C MRP2P10663 115 aaPredicted RBP2.34□□□□□ -2.03
SHE2YKL130C PMS1P14242 873 aa2.34□□□□□ -2.03
SHE2YKL130C PDA1P16387 420 aaKnown RBP2.34□□□□□ -2.03
SHE2YKL130C EST1P17214 699 aaPredicted RBP2.34□□□□□ -2.03
SHE2YKL130C CLC1P17891 233 aa2.34□□□□□ -2.03
SHE2YKL130C ADK2P26364 225 aa2.34□□□□□ -2.03
SHE2YKL130C SYN8P31377 255 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms