RNA–Protein interactions for RNA: YKL088W

CAB3, Transcript of Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis, yeast

Gene CAB3, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAB3	YKL088W	NIP100	P33420	868 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	VID24	P38263	362 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	STB5	P38699	743 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	YHR097C	P38809	366 aa	Known RBP	4.82	□□□□□ -1.64
CAB3	YKL088W	YIL161W	P40449	235 aa	Known RBP	4.82	□□□□□ -1.64
CAB3	YKL088W	SDP1	P40479	209 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	MET28	P40573	187 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	MMM1	P41800	426 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	CTK3	P46963	296 aa	Predicted RBP	4.82	□□□□□ -1.64
CAB3	YKL088W	BIT61	P47041	543 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	YNR068C	P53754	272 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	ARG5,6	Q01217	863 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	NGL2	Q03264	515 aa	Known RBP	4.82	□□□□□ -1.64
CAB3	YKL088W	MUS81	Q04149	632 aa	Predicted RBP	4.82	□□□□□ -1.64
CAB3	YKL088W	RAD33	Q04231	177 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	YPR078C	Q06813	372 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	LUC7	Q07508	261 aa	Predicted RBP	4.82	□□□□□ -1.64
CAB3	YKL088W	WHI4	Q07655	649 aa	Known RBP	4.82	□□□□□ -1.64
CAB3	YKL088W	AFI1	Q99222	893 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	VCX1	Q99385	411 aa		4.82	□□□□□ -1.64
CAB3	YKL088W	CBP1	P07252	654 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	YML002W	P0CF17	737 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	KIN2	P13186	1147 aa	Known RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	ERV1	P27882	189 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	SSE1	P32589	693 aa	Known RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	LOT5	P34234	306 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	SAP1	P39955	897 aa	Known RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	SLZ1	P40167	298 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	NAS2	P40555	220 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	IAH1	P41734	238 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	MIC19	P43594	170 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	YDL183C	P48569	320 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	LCL3	P53153	274 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	SNF12	P53628	566 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	ERV25	P54837	211 aa	Known RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	MSC2	Q03455	724 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	EFR3	Q03653	782 aa	Known RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	YMR114C	Q04471	368 aa	Known RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	RNH1	Q04740	348 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	ROY1	Q04847	553 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	NOP6	Q07623	225 aa	Known RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	CLP1	Q08685	445 aa	Predicted RBP	4.81	□□□□□ -1.64
CAB3	YKL088W	AIM41	Q12032	185 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	MDY2	Q12285	212 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	YJR112W-A	Q3E743	109 aa		4.81	□□□□□ -1.64
CAB3	YKL088W	GPM1	P00950	247 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
CAB3	YKL088W	ERG11	P10614	530 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	CLN3	P13365	580 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	PGM1	P33401	570 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	YKL023W	P36103	277 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	AUR1	P36107	401 aa	Predicted RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	DAD2	P36162	133 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	APT2	P36973	181 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	PHO88	P38264	188 aa	Predicted RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	YHR054C	P38780	354 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	MTG2	P38860	518 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	ZRG8	P40021	1076 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	LIF1	P53150	421 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	MNP1	P53163	194 aa	Predicted RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	TAM41	P53230	385 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	YGR066C	P53242	292 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	YGR117C	P53270	476 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	DSL1	P53847	754 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	INN1	P53901	409 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	REX2	P54964	269 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	MRS2	Q01926	470 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	MUB1	Q03162	620 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	CLU1	Q03690	1277 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	YAP6	Q03935	383 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	SPH1	Q06160	661 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	YEH1	Q07804	573 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	RPN5	Q12250	445 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	PSY3	Q12318	242 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	TY1A-NL1	Q12391	440 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	CTF3	Q12748	733 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	ISN1	Q99312	450 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	CDC8	P00572	216 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	SEC12	P11655	471 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	PHO84	P25297	587 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	DAL80	P26343	269 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	AIM26	P32858	118 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	COY1	P34237	679 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	HEL1	P36113	551 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	POL12	P38121	705 aa	Predicted RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	OTU2	P38747	307 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	OSW5	P40219	148 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	SDS3	P40505	327 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	FET5	P43561	622 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	DIG1	Q03063	452 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	ARX1	Q03862	593 aa	Known RBP	4.8	□□□□□ -1.64
CAB3	YKL088W	YLR297W	Q05899	129 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	STP3	Q05937	343 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	SFH1	Q06168	426 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	MCM21	Q06675	368 aa		4.8	□□□□□ -1.64
CAB3	YKL088W	RAD3	P06839	778 aa		4.79	□□□□□ -1.64
CAB3	YKL088W	LAT1	P12695	482 aa	Known RBP	4.79	□□□□□ -1.64
CAB3	YKL088W	PRP28	P23394	588 aa		4.79	□□□□□ -1.64
CAB3	YKL088W	KIN82	P25341	720 aa		4.79	□□□□□ -1.64
CAB3	YKL088W	PRE2	P30656	287 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms