RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W YNL234WP53857 426 aa3.64□□□□□ -1.83
SWD2YKL018W PFA5Q03289 374 aa3.64□□□□□ -1.83
SWD2YKL018W FMP42Q04991 504 aa3.64□□□□□ -1.83
SWD2YKL018W GRC3Q07845 632 aa3.64□□□□□ -1.83
SWD2YKL018W YER145C-AA0A023PYF4 145 aa3.63□□□□□ -1.83
SWD2YKL018W HXK2P04807 486 aaKnown RBP3.63□□□□□ -1.83
SWD2YKL018W CBP1P07252 654 aa3.63□□□□□ -1.83
SWD2YKL018W RPC53P25441 422 aa3.63□□□□□ -1.83
SWD2YKL018W ERG3P32353 365 aa3.63□□□□□ -1.83
SWD2YKL018W PDB1P32473 366 aaKnown RBP3.63□□□□□ -1.83
SWD2YKL018W PEX5P35056 612 aa3.63□□□□□ -1.83
SWD2YKL018W UBP11P36026 717 aa3.63□□□□□ -1.83
SWD2YKL018W AAP1P37898 856 aaKnown RBP3.63□□□□□ -1.83
SWD2YKL018W UBP13P38187 747 aa3.63□□□□□ -1.83
SWD2YKL018W SRP72P38688 640 aaKnown RBP3.63□□□□□ -1.83
SWD2YKL018W PHM8P40025 321 aa3.63□□□□□ -1.83
SWD2YKL018W BUR6P40096 142 aa3.63□□□□□ -1.83
SWD2YKL018W AXL1P40851 1208 aa3.63□□□□□ -1.83
SWD2YKL018W LYS4P49367 693 aaPredicted RBP3.63□□□□□ -1.83
SWD2YKL018W STR3P53101 465 aaKnown RBP3.63□□□□□ -1.83
SWD2YKL018W INA17Q02888 182 aa3.63□□□□□ -1.83
SWD2YKL018W RSM28Q03430 361 aa3.63□□□□□ -1.83
SWD2YKL018W YLR455WQ06188 304 aa3.63□□□□□ -1.83
SWD2YKL018W YEH1Q07804 573 aa3.63□□□□□ -1.83
SWD2YKL018W SPE4Q12455 300 aa3.63□□□□□ -1.83
SWD2YKL018W YJR112W-AQ3E743 109 aa3.63□□□□□ -1.83
SWD2YKL018W DNA2P38859 1522 aa3.63□□□□□ -1.83
SWD2YKL018W ARD1P07347 238 aaPredicted RBP3.62□□□□□ -1.83
SWD2YKL018W YFL068WP0CX99 160 aa3.62□□□□□ -1.83
SWD2YKL018W YLL066W-AP0CY00 160 aa3.62□□□□□ -1.83
SWD2YKL018W YLL067W-AP0CY01 160 aa3.62□□□□□ -1.83
SWD2YKL018W PWP1P21304 576 aaKnown RBP3.62□□□□□ -1.83
SWD2YKL018W ADE17P38009 592 aaKnown RBP3.62□□□□□ -1.83
SWD2YKL018W YNG2P38806 282 aaKnown RBP3.62□□□□□ -1.83
SWD2YKL018W BZZ1P38822 633 aa3.62□□□□□ -1.83
SWD2YKL018W SEC31P38968 1273 aaKnown RBP3.62□□□□□ -1.83
SWD2YKL018W DIA3P52290 468 aa3.62□□□□□ -1.83
SWD2YKL018W VID30P53076 958 aa3.62□□□□□ -1.83
SWD2YKL018W MEH1Q02205 184 aa3.62□□□□□ -1.83
SWD2YKL018W SXM1Q04175 944 aaKnown RBP3.62□□□□□ -1.83
SWD2YKL018W CAC2Q04199 468 aa3.62□□□□□ -1.83
SWD2YKL018W YLR352WQ06479 807 aa3.62□□□□□ -1.83
SWD2YKL018W RIM20Q12033 661 aa3.62□□□□□ -1.83
SWD2YKL018W PGA3Q12746 312 aaKnown RBP3.62□□□□□ -1.83
SWD2YKL018W SMC6Q12749 1114 aa3.62□□□□□ -1.83
SWD2YKL018W DFR1P07807 211 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SWD2YKL018W PCT1P13259 424 aa3.61□□□□□ -1.83
SWD2YKL018W PDX1P16451 410 aa3.61□□□□□ -1.83
SWD2YKL018W EST1P17214 699 aaPredicted RBP3.61□□□□□ -1.83
SWD2YKL018W PPZ1P26570 692 aa3.61□□□□□ -1.83
SWD2YKL018W CDC60P26637 1090 aaKnown RBP3.61□□□□□ -1.83
SWD2YKL018W CAB3P36076 571 aa3.61□□□□□ -1.83
SWD2YKL018W YEL057CP39983 233 aa3.61□□□□□ -1.83
SWD2YKL018W ECM10P39987 644 aa3.61□□□□□ -1.83
SWD2YKL018W LSM5P40089 93 aaKnown RBP3.61□□□□□ -1.83
SWD2YKL018W CTK2P46962 323 aa3.61□□□□□ -1.83
SWD2YKL018W IST1P53843 298 aaPredicted RBP3.61□□□□□ -1.83
SWD2YKL018W EAF7P53911 425 aaKnown RBP3.61□□□□□ -1.83
SWD2YKL018W ZDS2P54786 942 aa3.61□□□□□ -1.83
SWD2YKL018W MCP2Q06567 569 aa3.61□□□□□ -1.83
SWD2YKL018W FMP40Q08968 688 aaPredicted RBP3.61□□□□□ -1.83
SWD2YKL018W ISA2Q12425 185 aa3.61□□□□□ -1.83
SWD2YKL018W YPT6Q99260 215 aa3.61□□□□□ -1.83
SWD2YKL018W MF(ALPHA)1P01149 165 aa3.6□□□□□ -1.83
SWD2YKL018W SRP54P20424 541 aaKnown RBP3.6□□□□□ -1.83
SWD2YKL018W CLB3P24870 427 aa3.6□□□□□ -1.83
SWD2YKL018W ADH7P25377 361 aa3.6□□□□□ -1.83
SWD2YKL018W GPI10P30777 616 aa3.6□□□□□ -1.83
SWD2YKL018W SWI3P32591 825 aa3.6□□□□□ -1.83
SWD2YKL018W DIA4P38705 446 aaPredicted RBP3.6□□□□□ -1.83
SWD2YKL018W MET18P40469 1032 aa3.6□□□□□ -1.83
SWD2YKL018W DPB11P47027 764 aaPredicted RBP3.6□□□□□ -1.83
SWD2YKL018W YNL181WP53878 407 aa3.6□□□□□ -1.83
SWD2YKL018W ESBP6P53918 673 aa3.6□□□□□ -1.83
SWD2YKL018W ERO1Q03103 563 aa3.6□□□□□ -1.83
SWD2YKL018W RMT2Q03305 412 aa3.6□□□□□ -1.83
SWD2YKL018W TLG1Q03322 224 aa3.6□□□□□ -1.83
SWD2YKL018W LUC7Q07508 261 aaPredicted RBP3.6□□□□□ -1.83
SWD2YKL018W TIP41Q12199 356 aa3.6□□□□□ -1.83
SWD2YKL018W OPI1P21957 404 aa3.59□□□□□ -1.83
SWD2YKL018W SEF1P34228 1148 aa3.59□□□□□ -1.83
SWD2YKL018W CST26P38226 397 aa3.59□□□□□ -1.83
SWD2YKL018W VID24P38263 362 aa3.59□□□□□ -1.83
SWD2YKL018W RFC1P38630 861 aaKnown RBP3.59□□□□□ -1.83
SWD2YKL018W SMF1P38925 575 aa3.59□□□□□ -1.83
SWD2YKL018W CCT6P39079 546 aa3.59□□□□□ -1.83
SWD2YKL018W YJL068CP40363 299 aa3.59□□□□□ -1.83
SWD2YKL018W SGN1P40561 250 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SWD2YKL018W MET28P40573 187 aa3.59□□□□□ -1.83
SWD2YKL018W SSU1P41930 458 aa3.59□□□□□ -1.83
SWD2YKL018W YFR020WP43600 232 aa3.59□□□□□ -1.83
SWD2YKL018W YGR250CP53316 781 aaKnown RBP3.59□□□□□ -1.83
SWD2YKL018W YDR239CQ03780 787 aa3.59□□□□□ -1.83
SWD2YKL018W YDR415CQ04033 374 aaPredicted RBP3.59□□□□□ -1.83
SWD2YKL018W YMR254CQ04838 102 aa3.59□□□□□ -1.83
SWD2YKL018W VPS38Q05919 439 aa3.59□□□□□ -1.83
SWD2YKL018W INP53Q12271 1107 aa3.59□□□□□ -1.83
SWD2YKL018W GRX6Q12438 231 aa3.59□□□□□ -1.83
SWD2YKL018W GAL80P04387 435 aa3.58□□□□□ -1.84
SWD2YKL018W SPE2P21182 396 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms