RNA–Protein interactions for RNA: YJL033W

HCA4, Transcript of DEAD box RNA helicase, yeastyeast

Gene HCA4, Length 2,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCA4YJL033W FES1P38260 290 aa3.94□□□□□ -1.78
HCA4YJL033W HSM3P38348 480 aa3.94□□□□□ -1.78
HCA4YJL033W COP1P53622 1201 aaKnown RBP3.94□□□□□ -1.78
HCA4YJL033W ESBP6P53918 673 aa3.94□□□□□ -1.78
HCA4YJL033W GPN2Q08726 347 aaPredicted RBP3.94□□□□□ -1.78
HCA4YJL033W RPL7BQ12213 244 aaKnown RBP3.94□□□□□ -1.78
HCA4YJL033W YMR084WA2P2R3 262 aa3.93□□□□□ -1.78
HCA4YJL033W AAC1P04710 309 aa3.93□□□□□ -1.78
HCA4YJL033W PGI1P12709 554 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W RSR1P13856 272 aa3.93□□□□□ -1.78
HCA4YJL033W VMA2P16140 517 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W RNR3P21672 869 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W DPB2P24482 689 aaPredicted RBP3.93□□□□□ -1.78
HCA4YJL033W SIN4P32259 974 aa3.93□□□□□ -1.78
HCA4YJL033W NDT80P38830 627 aa3.93□□□□□ -1.78
HCA4YJL033W GPD2P41911 440 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W SGM1P47166 707 aa3.93□□□□□ -1.78
HCA4YJL033W COS12P53053 380 aa3.93□□□□□ -1.78
HCA4YJL033W CIK1Q01649 594 aa3.93□□□□□ -1.78
HCA4YJL033W EBS1Q03466 884 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W PIG1Q06216 648 aa3.93□□□□□ -1.78
HCA4YJL033W MRI1Q06489 411 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W CSR1Q06705 408 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W HIS4P00815 799 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W HOM2P13663 365 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W NIP1P32497 812 aaKnown RBP3.93□□□□□ -1.78
HCA4YJL033W RXT2P38255 430 aa3.93□□□□□ -1.78
HCA4YJL033W SDH8P38345 138 aa3.93□□□□□ -1.78
HCA4YJL033W VMA22P38784 181 aa3.93□□□□□ -1.78
HCA4YJL033W PEX18P38855 283 aa3.93□□□□□ -1.78
HCA4YJL033W PDS1P40316 373 aaPredicted RBP3.93□□□□□ -1.78
HCA4YJL033W RTS3P53289 263 aa3.93□□□□□ -1.78
HCA4YJL033W YGR266WP53326 701 aa3.93□□□□□ -1.78
HCA4YJL033W SOV1Q04748 898 aa3.93□□□□□ -1.78
HCA4YJL033W OPY2Q06810 360 aa3.93□□□□□ -1.78
HCA4YJL033W VIK1Q12045 647 aa3.93□□□□□ -1.78
HCA4YJL033W ARP7Q12406 477 aa3.93□□□□□ -1.78
HCA4YJL033W RPL24AP04449 155 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W SNA3P14359 133 aa3.92□□□□□ -1.78
HCA4YJL033W MAK31P23059 88 aa3.92□□□□□ -1.78
HCA4YJL033W YCR051WP25631 222 aa3.92□□□□□ -1.78
HCA4YJL033W MRPL9P31334 269 aa3.92□□□□□ -1.78
HCA4YJL033W HIR2P32480 875 aa3.92□□□□□ -1.78
HCA4YJL033W XRS2P33301 854 aa3.92□□□□□ -1.78
HCA4YJL033W UTP11P34247 250 aaPredicted RBP3.92□□□□□ -1.78
HCA4YJL033W OCT1P35999 772 aa3.92□□□□□ -1.78
HCA4YJL033W RTS1P38903 757 aa3.92□□□□□ -1.78
HCA4YJL033W SWD1P39706 426 aa3.92□□□□□ -1.78
HCA4YJL033W VFA1P40080 203 aa3.92□□□□□ -1.78
HCA4YJL033W ULP2P40537 1034 aaPredicted RBP3.92□□□□□ -1.78
HCA4YJL033W FYV8P46949 817 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W FIN1Q03898 291 aa3.92□□□□□ -1.78
HCA4YJL033W SYF1Q04048 859 aaPredicted RBP3.92□□□□□ -1.78
HCA4YJL033W URH1Q04179 340 aa3.92□□□□□ -1.78
HCA4YJL033W VTI1Q04338 217 aa3.92□□□□□ -1.78
HCA4YJL033W AIM33Q04516 312 aa3.92□□□□□ -1.78
HCA4YJL033W YDR341CQ05506 607 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W FUS2Q05670 677 aa3.92□□□□□ -1.78
HCA4YJL033W YLR287CQ05881 355 aa3.92□□□□□ -1.78
HCA4YJL033W NBL1Q3E7Y6 73 aa3.92□□□□□ -1.78
HCA4YJL033W PMD1P32634 1753 aa3.92□□□□□ -1.78
HCA4YJL033W SSC1P0CS90 654 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W SST2P11972 698 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W YPK1P12688 680 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W CKI1P20485 582 aa3.92□□□□□ -1.78
HCA4YJL033W BUD23P25627 275 aaPredicted RBP3.92□□□□□ -1.78
HCA4YJL033W RPS7AP26786 190 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W ITR2P30606 609 aa3.92□□□□□ -1.78
HCA4YJL033W CDC5P32562 705 aa3.92□□□□□ -1.78
HCA4YJL033W ORC2P32833 620 aa3.92□□□□□ -1.78
HCA4YJL033W YBR242WP38331 238 aa3.92□□□□□ -1.78
HCA4YJL033W STB5P38699 743 aa3.92□□□□□ -1.78
HCA4YJL033W MET18P40469 1032 aa3.92□□□□□ -1.78
HCA4YJL033W OPT1P40897 799 aa3.92□□□□□ -1.78
HCA4YJL033W RIM15P43565 1770 aa3.92□□□□□ -1.78
HCA4YJL033W IDS2P46958 469 aa3.92□□□□□ -1.78
HCA4YJL033W HAM1P47119 197 aaKnown RBP3.92□□□□□ -1.78
HCA4YJL033W YML122CQ03207 126 aa3.92□□□□□ -1.78
HCA4YJL033W RSM28Q03430 361 aa3.92□□□□□ -1.78
HCA4YJL033W COA4Q05809 96 aa3.92□□□□□ -1.78
HCA4YJL033W CRD1Q07560 283 aa3.92□□□□□ -1.78
HCA4YJL033W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
HCA4YJL033W CRT10Q08226 957 aa3.92□□□□□ -1.78
HCA4YJL033W REP1P03871 373 aa3.91□□□□□ -1.78
HCA4YJL033W HEM1P09950 548 aaPredicted RBP3.91□□□□□ -1.78
HCA4YJL033W SAM2P19358 384 aaKnown RBP3.91□□□□□ -1.78
HCA4YJL033W CHS3P29465 1165 aa3.91□□□□□ -1.78
HCA4YJL033W SMY1P32364 656 aaKnown RBP3.91□□□□□ -1.78
HCA4YJL033W RPC34P32910 317 aa3.91□□□□□ -1.78
HCA4YJL033W MYO3P36006 1272 aa3.91□□□□□ -1.78
HCA4YJL033W PCF11P39081 626 aaPredicted RBP3.91□□□□□ -1.78
HCA4YJL033W TDA10P42938 290 aa3.91□□□□□ -1.78
HCA4YJL033W HOP2P53187 214 aa3.91□□□□□ -1.78
HCA4YJL033W CEG1Q01159 459 aaPredicted RBP3.91□□□□□ -1.78
HCA4YJL033W RPM2Q02773 1202 aa3.91□□□□□ -1.78
HCA4YJL033W TMA64Q04600 565 aaKnown RBP3.91□□□□□ -1.78
HCA4YJL033W ENT2Q05785 613 aa3.91□□□□□ -1.78
HCA4YJL033W ATG17Q06410 417 aa3.91□□□□□ -1.78
HCA4YJL033W BBP1Q12365 385 aa3.91□□□□□ -1.78
HCA4YJL033W SEM1O94742 89 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms