RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RDR1Q08904 546 aa2.42□□□□□ -2.02
RPL40AYIL148W FRE3Q08905 711 aa2.42□□□□□ -2.02
RPL40AYIL148W ATG9Q12142 997 aa2.42□□□□□ -2.02
RPL40AYIL148W SFI1Q12369 946 aa2.42□□□□□ -2.02
RPL40AYIL148W YPT6Q99260 215 aa2.42□□□□□ -2.02
RPL40AYIL148W YPR089WO13585 888 aa2.41□□□□□ -2.02
RPL40AYIL148W GAL80P04387 435 aa2.41□□□□□ -2.02
RPL40AYIL148W CHO1P08456 276 aa2.41□□□□□ -2.02
RPL40AYIL148W CKA1P15790 372 aa2.41□□□□□ -2.02
RPL40AYIL148W KAR3P17119 729 aa2.41□□□□□ -2.02
RPL40AYIL148W STE50P25344 346 aa2.41□□□□□ -2.02
RPL40AYIL148W YBL055CP34220 418 aaPredicted RBP2.41□□□□□ -2.02
RPL40AYIL148W YNK1P36010 153 aaKnown RBP2.41□□□□□ -2.02
RPL40AYIL148W RPL32P38061 130 aaKnown RBP2.41□□□□□ -2.02
RPL40AYIL148W MNN2P38069 597 aa2.41□□□□□ -2.02
RPL40AYIL148W SRO77P38163 1010 aa2.41□□□□□ -2.02
RPL40AYIL148W TSC10P38342 320 aa2.41□□□□□ -2.02
RPL40AYIL148W RRP3P38712 501 aaKnown RBP2.41□□□□□ -2.02
RPL40AYIL148W ANS1P38832 159 aa2.41□□□□□ -2.02
RPL40AYIL148W YMR124WP39523 943 aaKnown RBP2.41□□□□□ -2.02
RPL40AYIL148W SPO22P40511 975 aa2.41□□□□□ -2.02
RPL40AYIL148W VTC2P43585 828 aa2.41□□□□□ -2.02
RPL40AYIL148W YGL082WP53155 381 aa2.41□□□□□ -2.02
RPL40AYIL148W ARE2P53629 642 aaKnown RBP2.41□□□□□ -2.02
RPL40AYIL148W RSM23Q01163 450 aa2.41□□□□□ -2.02
RPL40AYIL148W YMR160WQ03823 816 aa2.41□□□□□ -2.02
RPL40AYIL148W YDR415CQ04033 374 aaPredicted RBP2.41□□□□□ -2.02
RPL40AYIL148W ECI1Q05871 280 aa2.41□□□□□ -2.02
RPL40AYIL148W ATG26Q06321 1198 aa2.41□□□□□ -2.02
RPL40AYIL148W YDL218WQ07629 317 aa2.41□□□□□ -2.02
RPL40AYIL148W ATX2Q12067 313 aa2.41□□□□□ -2.02
RPL40AYIL148W RRG1Q12167 365 aaPredicted RBP2.41□□□□□ -2.02
RPL40AYIL148W SCM3Q12334 223 aa2.41□□□□□ -2.02
RPL40AYIL148W SGS1P35187 1447 aa2.41□□□□□ -2.02
RPL40AYIL148W CBP1P07252 654 aa2.4□□□□□ -2.03
RPL40AYIL148W ART10P18634 518 aaKnown RBP2.4□□□□□ -2.03
RPL40AYIL148W REC107P21651 314 aa2.4□□□□□ -2.03
RPL40AYIL148W CLB2P24869 491 aa2.4□□□□□ -2.03
RPL40AYIL148W CLB3P24870 427 aa2.4□□□□□ -2.03
RPL40AYIL148W PUP3P25451 205 aaKnown RBP2.4□□□□□ -2.03
RPL40AYIL148W MPE1P35728 441 aaKnown RBP2.4□□□□□ -2.03
RPL40AYIL148W VID24P38263 362 aa2.4□□□□□ -2.03
RPL40AYIL148W CIN4P39110 191 aa2.4□□□□□ -2.03
RPL40AYIL148W NPR2P39923 615 aa2.4□□□□□ -2.03
RPL40AYIL148W IRC6P43615 237 aa2.4□□□□□ -2.03
RPL40AYIL148W IMD4P50094 524 aaKnown RBP2.4□□□□□ -2.03
RPL40AYIL148W YGR126WP53274 230 aa2.4□□□□□ -2.03
RPL40AYIL148W GIS2P53849 153 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03 RIP-Chip
RPL40AYIL148W YNL181WP53878 407 aa2.4□□□□□ -2.03
RPL40AYIL148W BOP3P53958 396 aa2.4□□□□□ -2.03
RPL40AYIL148W FIN1Q03898 291 aa2.4□□□□□ -2.03
RPL40AYIL148W GSH2Q08220 491 aa2.4□□□□□ -2.03
RPL40AYIL148W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
RPL40AYIL148W HER1Q12276 1246 aa2.4□□□□□ -2.03
RPL40AYIL148W SPE4Q12455 300 aa2.4□□□□□ -2.03
RPL40AYIL148W EDE1P34216 1381 aa2.39□□□□□ -2.03
RPL40AYIL148W MET17P06106 444 aa2.39□□□□□ -2.03
RPL40AYIL148W SNF3P10870 884 aa2.39□□□□□ -2.03
RPL40AYIL148W BUD5P25300 642 aaPredicted RBP2.39□□□□□ -2.03
RPL40AYIL148W GAC1P28006 793 aa2.39□□□□□ -2.03
RPL40AYIL148W MGM1P32266 881 aa2.39□□□□□ -2.03
RPL40AYIL148W DBF4P32325 704 aa2.39□□□□□ -2.03
RPL40AYIL148W TCD2P36101 447 aaKnown RBP2.39□□□□□ -2.03
RPL40AYIL148W YKL023WP36103 277 aaKnown RBP2.39□□□□□ -2.03
RPL40AYIL148W PCI8P40512 444 aa2.39□□□□□ -2.03
RPL40AYIL148W IAH1P41734 238 aa2.39□□□□□ -2.03
RPL40AYIL148W MDV1P47025 714 aa2.39□□□□□ -2.03
RPL40AYIL148W LYS20P48570 428 aaKnown RBP2.39□□□□□ -2.03
RPL40AYIL148W ASI1P54074 624 aa2.39□□□□□ -2.03
RPL40AYIL148W TAF11Q04226 346 aa2.39□□□□□ -2.03
RPL40AYIL148W SSK1Q07084 712 aa2.39□□□□□ -2.03
RPL40AYIL148W YDL057WQ07379 328 aa2.39□□□□□ -2.03
RPL40AYIL148W ATG29Q12092 213 aa2.39□□□□□ -2.03
RPL40AYIL148W YLR112WQ12130 139 aa2.39□□□□□ -2.03
RPL40AYIL148W BRR1Q99177 341 aaPredicted RBP2.39□□□□□ -2.03
RPL40AYIL148W GAL4P04386 881 aa2.38□□□□□ -2.03
RPL40AYIL148W PUT2P07275 575 aa2.38□□□□□ -2.03
RPL40AYIL148W SRV2P17555 526 aaKnown RBP2.38□□□□□ -2.03
RPL40AYIL148W MCM4P30665 933 aaKnown RBP2.38□□□□□ -2.03
RPL40AYIL148W SNC1P31109 117 aa2.38□□□□□ -2.03
RPL40AYIL148W PXA2P34230 853 aa2.38□□□□□ -2.03
RPL40AYIL148W CMC1P36064 111 aa2.38□□□□□ -2.03
RPL40AYIL148W BYE1P36106 594 aa2.38□□□□□ -2.03
RPL40AYIL148W MSR1P38714 643 aa2.38□□□□□ -2.03
RPL40AYIL148W VPS41P38959 992 aa2.38□□□□□ -2.03
RPL40AYIL148W YIL060WP40519 144 aa2.38□□□□□ -2.03
RPL40AYIL148W ALK1P43633 760 aaKnown RBP2.38□□□□□ -2.03
RPL40AYIL148W SNG1P46950 547 aa2.38□□□□□ -2.03
RPL40AYIL148W PET130P47065 347 aa2.38□□□□□ -2.03
RPL40AYIL148W MNP1P53163 194 aaPredicted RBP2.38□□□□□ -2.03
RPL40AYIL148W TWF1P53250 332 aa2.38□□□□□ -2.03
RPL40AYIL148W SMM1P53720 384 aaKnown RBP2.38□□□□□ -2.03
RPL40AYIL148W TOF2Q02208 771 aa2.38□□□□□ -2.03
RPL40AYIL148W SHR3Q02774 210 aa2.38□□□□□ -2.03
RPL40AYIL148W IZH1Q03419 316 aa2.38□□□□□ -2.03
RPL40AYIL148W CAC2Q04199 468 aa2.38□□□□□ -2.03
RPL40AYIL148W RLM1Q12224 676 aa2.38□□□□□ -2.03
RPL40AYIL148W UBX3Q12229 455 aa2.38□□□□□ -2.03
RPL40AYIL148W RTN2Q12443 393 aa2.38□□□□□ -2.03
RPL40AYIL148W MRP13P12686 339 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms