RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C TEN1Q07921 160 aa4.83□□□□□ -1.64
SPO16YHR153C DSE3Q08729 430 aa4.83□□□□□ -1.64
SPO16YHR153C CIR2Q08822 631 aa4.83□□□□□ -1.64
SPO16YHR153C YPT6Q99260 215 aa4.83□□□□□ -1.64
SPO16YHR153C DFR1P07807 211 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
SPO16YHR153C SUI2P20459 304 aaKnown RBP4.82□□□□□ -1.64
SPO16YHR153C IMG1P25626 169 aa4.82□□□□□ -1.64
SPO16YHR153C YBR144CP34215 104 aa4.82□□□□□ -1.64
SPO16YHR153C YBL055CP34220 418 aaPredicted RBP4.82□□□□□ -1.64
SPO16YHR153C SEF1P34228 1148 aa4.82□□□□□ -1.64
SPO16YHR153C NUP133P36161 1157 aa4.82□□□□□ -1.64
SPO16YHR153C ICS2P38284 255 aa4.82□□□□□ -1.64
SPO16YHR153C YBR225WP38321 900 aa4.82□□□□□ -1.64
SPO16YHR153C ESL1P40456 1118 aa4.82□□□□□ -1.64
SPO16YHR153C SRB7P47822 140 aa4.82□□□□□ -1.64
SPO16YHR153C SEC5P89102 971 aa4.82□□□□□ -1.64
SPO16YHR153C MDM1Q01846 1127 aa4.82□□□□□ -1.64
SPO16YHR153C RTT109Q07794 436 aa4.82□□□□□ -1.64
SPO16YHR153C GRC3Q07845 632 aa4.82□□□□□ -1.64
SPO16YHR153C YOL159CQ08300 171 aa4.82□□□□□ -1.64
SPO16YHR153C EDE1P34216 1381 aa4.81□□□□□ -1.64
SPO16YHR153C YPT1P01123 206 aaKnown RBP4.81□□□□□ -1.64
SPO16YHR153C CBP1P07252 654 aa4.81□□□□□ -1.64
SPO16YHR153C JNM1P36224 373 aa4.81□□□□□ -1.64
SPO16YHR153C YPK3P38070 525 aa4.81□□□□□ -1.64
SPO16YHR153C LEU5P38702 357 aa4.81□□□□□ -1.64
SPO16YHR153C UBA4P38820 440 aa4.81□□□□□ -1.64
SPO16YHR153C ALG5P40350 334 aa4.81□□□□□ -1.64
SPO16YHR153C ARE2P53629 642 aaKnown RBP4.81□□□□□ -1.64
SPO16YHR153C RPT6Q01939 405 aaKnown RBP4.81□□□□□ -1.64
SPO16YHR153C IZH1Q03419 316 aa4.81□□□□□ -1.64
SPO16YHR153C FIN1Q03898 291 aa4.81□□□□□ -1.64
SPO16YHR153C ADE13Q05911 482 aaKnown RBP4.81□□□□□ -1.64
SPO16YHR153C ECM30Q06673 1274 aa4.81□□□□□ -1.64
SPO16YHR153C YDL218WQ07629 317 aa4.81□□□□□ -1.64
SPO16YHR153C MLH2Q07980 695 aa4.81□□□□□ -1.64
SPO16YHR153C CDC45Q08032 650 aa4.81□□□□□ -1.64
SPO16YHR153C YLR112WQ12130 139 aa4.81□□□□□ -1.64
SPO16YHR153C TAH18Q12181 623 aa4.81□□□□□ -1.64
SPO16YHR153C LTE1P07866 1435 aa4.8□□□□□ -1.64
SPO16YHR153C INH1P01097 85 aa4.8□□□□□ -1.64
SPO16YHR153C CDC31P06704 161 aaKnown RBP4.8□□□□□ -1.64
SPO16YHR153C ATO2P32907 282 aa4.8□□□□□ -1.64
SPO16YHR153C ANS1P38832 159 aa4.8□□□□□ -1.64
SPO16YHR153C CIN4P39110 191 aa4.8□□□□□ -1.64
SPO16YHR153C NDE1P40215 560 aa4.8□□□□□ -1.64
SPO16YHR153C HXT9P40885 567 aa4.8□□□□□ -1.64
SPO16YHR153C GAT1P43574 510 aa4.8□□□□□ -1.64
SPO16YHR153C IRC6P43615 237 aa4.8□□□□□ -1.64
SPO16YHR153C MFB1Q04922 465 aa4.8□□□□□ -1.64
SPO16YHR153C YAP7Q08182 245 aa4.8□□□□□ -1.64
SPO16YHR153C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
SPO16YHR153C AVL9Q12500 764 aa4.8□□□□□ -1.64
SPO16YHR153C GID7P25569 745 aa4.79□□□□□ -1.64
SPO16YHR153C SYN8P31377 255 aa4.79□□□□□ -1.64
SPO16YHR153C TMT1P32643 299 aa4.79□□□□□ -1.64
SPO16YHR153C GND1P38720 489 aaKnown RBP4.79□□□□□ -1.64
SPO16YHR153C PYK2P52489 506 aaKnown RBP4.79□□□□□ -1.64
SPO16YHR153C LCL3P53153 274 aa4.79□□□□□ -1.64
SPO16YHR153C YMR160WQ03823 816 aa4.79□□□□□ -1.64
SPO16YHR153C TDA9Q04545 1251 aa4.79□□□□□ -1.64
SPO16YHR153C RSF1Q05043 376 aa4.79□□□□□ -1.64
SPO16YHR153C GEP3Q08622 556 aa4.79□□□□□ -1.64
SPO16YHR153C BUD7Q08754 746 aa4.79□□□□□ -1.64
SPO16YHR153C RDR1Q08904 546 aa4.79□□□□□ -1.64
SPO16YHR153C MYO2P19524 1574 aaKnown RBP4.78□□□□□ -1.64
SPO16YHR153C SNC1P31109 117 aa4.78□□□□□ -1.64
SPO16YHR153C RKM3P38222 552 aa4.78□□□□□ -1.64
SPO16YHR153C ARP1P38696 384 aa4.78□□□□□ -1.64
SPO16YHR153C NPR2P39923 615 aa4.78□□□□□ -1.64
SPO16YHR153C YIL152WP40455 235 aa4.78□□□□□ -1.64
SPO16YHR153C YIL060WP40519 144 aa4.78□□□□□ -1.64
SPO16YHR153C SOL4P53315 255 aa4.78□□□□□ -1.64
SPO16YHR153C MPS1P54199 764 aa4.78□□□□□ -1.64
SPO16YHR153C TIM10P87108 93 aa4.78□□□□□ -1.64
SPO16YHR153C RSM23Q01163 450 aa4.78□□□□□ -1.64
SPO16YHR153C YPL068CQ02749 293 aa4.78□□□□□ -1.64
SPO16YHR153C VPS38Q05919 439 aa4.78□□□□□ -1.64
SPO16YHR153C SNF3P10870 884 aa4.77□□□□□ -1.65
SPO16YHR153C EST1P17214 699 aaPredicted RBP4.77□□□□□ -1.65
SPO16YHR153C ART10P18634 518 aaKnown RBP4.77□□□□□ -1.65
SPO16YHR153C KGD1P20967 1014 aaKnown RBP4.77□□□□□ -1.65
SPO16YHR153C RPL32P38061 130 aaKnown RBP4.77□□□□□ -1.65
SPO16YHR153C LAG1P38703 411 aa4.77□□□□□ -1.65
SPO16YHR153C NOC2P39744 710 aaKnown RBP4.77□□□□□ -1.65
SPO16YHR153C RTS2P40962 232 aa4.77□□□□□ -1.65
SPO16YHR153C RPS10BP46784 105 aaKnown RBP4.77□□□□□ -1.65
SPO16YHR153C BET4Q00618 327 aa4.77□□□□□ -1.65
SPO16YHR153C RPS10AQ08745 105 aaPredicted RBP4.77□□□□□ -1.65
SPO16YHR153C ARP6Q12509 438 aa4.77□□□□□ -1.65
SPO16YHR153C ATG2P53855 1592 aa4.77□□□□□ -1.65
SPO16YHR153C XRN1P22147 1528 aaKnown RBP4.77□□□□□ -1.65
SPO16YHR153C RPL42AP0CX27 106 aaKnown RBP4.76□□□□□ -1.65
SPO16YHR153C RPL42BP0CX28 106 aaKnown RBP4.76□□□□□ -1.65
SPO16YHR153C PDA1P16387 420 aaKnown RBP4.76□□□□□ -1.65
SPO16YHR153C PDR3P33200 976 aa4.76□□□□□ -1.65
SPO16YHR153C UBP11P36026 717 aa4.76□□□□□ -1.65
SPO16YHR153C TCD2P36101 447 aaKnown RBP4.76□□□□□ -1.65
SPO16YHR153C YKL023WP36103 277 aaKnown RBP4.76□□□□□ -1.65
SPO16YHR153C ROT2P38138 954 aa4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms