RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W SCD6P45978 349 aaKnown RBP RIP-Chip data0.56□□□□□ -2.32 RIP-Chip
CSE1YGL238W HOL1P53389 586 aa0.56□□□□□ -2.32
CSE1YGL238W YNL234WP53857 426 aa0.56□□□□□ -2.32
CSE1YGL238W TDA7P53882 636 aaPredicted RBP0.56□□□□□ -2.32
CSE1YGL238W INN1P53901 409 aa0.56□□□□□ -2.32
CSE1YGL238W SAM50P53969 484 aa0.56□□□□□ -2.32
CSE1YGL238W ELP3Q02908 557 aaKnown RBP0.56□□□□□ -2.32
CSE1YGL238W MSC1Q03104 513 aa0.56□□□□□ -2.32
CSE1YGL238W RSM28Q03430 361 aa0.56□□□□□ -2.32
CSE1YGL238W MSS11Q03825 758 aa0.56□□□□□ -2.32
CSE1YGL238W YKU80Q04437 629 aa0.56□□□□□ -2.32
CSE1YGL238W DIC1Q06143 298 aa0.56□□□□□ -2.32
CSE1YGL238W IWR1Q07532 353 aaPredicted RBP0.56□□□□□ -2.32
CSE1YGL238W RRG7Q08774 242 aaPredicted RBP0.56□□□□□ -2.32
CSE1YGL238W NUR1Q12066 484 aa0.56□□□□□ -2.32
CSE1YGL238W PDR10P51533 1564 aa0.56□□□□□ -2.32
CSE1YGL238W SMC4Q12267 1418 aa0.56□□□□□ -2.32
CSE1YGL238W NUP145P49687 1317 aa0.55□□□□□ -2.32
CSE1YGL238W RAP1P11938 827 aa0.55□□□□□ -2.32
CSE1YGL238W CDC60P26637 1090 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W SYN8P31377 255 aa0.55□□□□□ -2.32
CSE1YGL238W DCP2P53550 970 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W YDR415CQ04033 374 aaPredicted RBP0.55□□□□□ -2.32
CSE1YGL238W PHM6Q05637 104 aa0.55□□□□□ -2.32
CSE1YGL238W FMP45Q07651 309 aa0.55□□□□□ -2.32
CSE1YGL238W CTF3Q12748 733 aa0.55□□□□□ -2.32
CSE1YGL238W VCX1Q99385 411 aa0.55□□□□□ -2.32
CSE1YGL238W BI3Q9ZZW7 517 aa0.55□□□□□ -2.32
CSE1YGL238W PET122P10355 254 aa0.55□□□□□ -2.32
CSE1YGL238W RIT1P23796 513 aa0.55□□□□□ -2.32
CSE1YGL238W MSN2P33748 704 aa0.55□□□□□ -2.32
CSE1YGL238W YBP1P38315 674 aa0.55□□□□□ -2.32
CSE1YGL238W FUN12P39730 1002 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W VPS52P39904 641 aa0.55□□□□□ -2.32
CSE1YGL238W CSM2P40465 213 aa0.55□□□□□ -2.32
CSE1YGL238W YGR210CP42942 411 aa0.55□□□□□ -2.32
CSE1YGL238W RRT5P43607 289 aa0.55□□□□□ -2.32
CSE1YGL238W RLI1Q03195 608 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W PAL1Q05518 499 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W SYO1Q07395 620 aa0.55□□□□□ -2.32
CSE1YGL238W YRF1-3P0CX14 1859 aa0.55□□□□□ -2.32
CSE1YGL238W YRF1-7P0CX15 1859 aa0.55□□□□□ -2.32
CSE1YGL238W YRF1-6P53819 1859 aa0.55□□□□□ -2.32
CSE1YGL238W SNQ2P32568 1501 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W YPR117WQ06116 2489 aa0.55□□□□□ -2.32
CSE1YGL238W CHS1P08004 1131 aa0.55□□□□□ -2.32
CSE1YGL238W NCP1P16603 691 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W DOS2P54858 310 aa0.55□□□□□ -2.32
CSE1YGL238W YVH1Q02256 364 aaKnown RBP0.55□□□□□ -2.32
CSE1YGL238W MLC2Q06580 163 aa0.55□□□□□ -2.32
CSE1YGL238W TMA17Q12513 150 aa0.55□□□□□ -2.32
CSE1YGL238W TAF2P23255 1407 aa0.54□□□□□ -2.32
CSE1YGL238W PUT2P07275 575 aa0.54□□□□□ -2.32
CSE1YGL238W PUT3P25502 979 aaPredicted RBP0.54□□□□□ -2.32
CSE1YGL238W SRB5P32585 307 aa0.54□□□□□ -2.32
CSE1YGL238W TFC4P33339 1025 aa0.54□□□□□ -2.32
CSE1YGL238W MTR2P34232 184 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W TAF5P38129 798 aa0.54□□□□□ -2.32
CSE1YGL238W MRP21P38175 177 aa0.54□□□□□ -2.32
CSE1YGL238W FMP10P40098 244 aa0.54□□□□□ -2.32
CSE1YGL238W YJL068CP40363 299 aa0.54□□□□□ -2.32
CSE1YGL238W PKP1P40530 394 aa0.54□□□□□ -2.32
CSE1YGL238W ERR3P42222 437 aa0.54□□□□□ -2.32
CSE1YGL238W YJR154WP47181 346 aa0.54□□□□□ -2.32
CSE1YGL238W INA17Q02888 182 aa0.54□□□□□ -2.32
CSE1YGL238W PFA5Q03289 374 aa0.54□□□□□ -2.32
CSE1YGL238W CRN1Q06440 651 aa0.54□□□□□ -2.32
CSE1YGL238W SWT1Q12104 458 aa0.54□□□□□ -2.32
CSE1YGL238W TOP2P06786 1428 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W NUP192P47054 1683 aa0.54□□□□□ -2.32
CSE1YGL238W SUP35P05453 685 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W RPL20AP0CX23 172 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W RPL20BP0CX24 172 aaPredicted RBP0.54□□□□□ -2.32
CSE1YGL238W POL3P15436 1097 aa0.54□□□□□ -2.32
CSE1YGL238W APA1P16550 321 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W PMU1P36069 295 aa0.54□□□□□ -2.32
CSE1YGL238W OSH3P38713 996 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W PUG1P40100 303 aa0.54□□□□□ -2.32
CSE1YGL238W SNG1P46950 547 aa0.54□□□□□ -2.32
CSE1YGL238W STR3P53101 465 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W PAP2P53632 584 aaKnown RBP0.54□□□□□ -2.32
CSE1YGL238W YLR049CQ12110 428 aa0.54□□□□□ -2.32
CSE1YGL238W YOL114CQ12322 202 aa0.54□□□□□ -2.32
CSE1YGL238W YBL111CQ3E7Y5 667 aa0.54□□□□□ -2.32
CSE1YGL238W SSN2P38931 1420 aa0.54□□□□□ -2.32
CSE1YGL238W SNT2P53127 1403 aa0.54□□□□□ -2.32
CSE1YGL238W YIL177CP40434 1758 aa0.54□□□□□ -2.32
CSE1YGL238W YJL225CP40889 1758 aa0.54□□□□□ -2.32
CSE1YGL238W VMR1P38735 1592 aa0.53□□□□□ -2.32
CSE1YGL238W YBT1P32386 1661 aa0.53□□□□□ -2.32
CSE1YGL238W SUI3P09064 285 aaKnown RBP0.53□□□□□ -2.32
CSE1YGL238W MTF1P14908 341 aaKnown RBP0.53□□□□□ -2.32
CSE1YGL238W PSD1P39006 500 aa0.53□□□□□ -2.32
CSE1YGL238W YPL108WQ02872 168 aaPredicted RBP0.53□□□□□ -2.32
CSE1YGL238W RNY1Q02933 434 aaKnown RBP0.53□□□□□ -2.32
CSE1YGL238W HEL2Q05580 639 aaKnown RBP0.53□□□□□ -2.32
CSE1YGL238W YOR365CQ08844 703 aa0.53□□□□□ -2.32
CSE1YGL238W PCD1Q12524 340 aa0.53□□□□□ -2.32
CSE1YGL238W TY3B-GQ99315 1547 aa0.53□□□□□ -2.32
CSE1YGL238W YPK9Q12697 1472 aa0.53□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms