RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C PXA2P34230 853 aa12.72□□□□□ -0.37
PHO4YFR034C ARB1P40024 610 aaKnown RBP12.72□□□□□ -0.37
PHO4YFR034C ERG10P41338 398 aaKnown RBP12.72□□□□□ -0.37
PHO4YFR034C VEL1P53058 206 aa12.72□□□□□ -0.37
PHO4YFR034C PRP38Q00723 242 aaPredicted RBP12.72□□□□□ -0.37
PHO4YFR034C HSP31Q04432 237 aa12.72□□□□□ -0.37
PHO4YFR034C SPC2Q04969 178 aa12.72□□□□□ -0.37
PHO4YFR034C CIA1Q05583 330 aa12.72□□□□□ -0.37
PHO4YFR034C YLR413WQ06689 675 aa12.72□□□□□ -0.37
PHO4YFR034C TPK2P06245 380 aa12.71□□□□□ -0.37
PHO4YFR034C UBA1P22515 1024 aaKnown RBP12.71□□□□□ -0.37
PHO4YFR034C ATP7P30902 174 aa12.71□□□□□ -0.37
PHO4YFR034C COX13P32799 129 aa12.71□□□□□ -0.37
PHO4YFR034C AST1P35183 429 aa12.71□□□□□ -0.37
PHO4YFR034C GIP1P38229 639 aa12.71□□□□□ -0.37
PHO4YFR034C TIM17P39515 158 aa12.71□□□□□ -0.37
PHO4YFR034C GLG2P47011 380 aa12.71□□□□□ -0.37
PHO4YFR034C PYK2P52489 506 aaKnown RBP12.71□□□□□ -0.37
PHO4YFR034C EMC4P53073 190 aa12.71□□□□□ -0.37
PHO4YFR034C NPL3Q01560 414 aaKnown RBP RIP-Chip data12.71□□□□□ -0.37 RIP-Chip
PHO4YFR034C PPN1Q04119 674 aa12.71□□□□□ -0.37
PHO4YFR034C MEU1Q07938 337 aaKnown RBP RIP-Chip data12.71□□□□□ -0.37not detected
PHO4YFR034C BUD7Q08754 746 aa12.71□□□□□ -0.37
PHO4YFR034C GTT2Q12390 233 aa12.71□□□□□ -0.37
PHO4YFR034C APA1P16550 321 aaKnown RBP12.7□□□□□ -0.38
PHO4YFR034C CCA1P21269 546 aa12.7□□□□□ -0.38
PHO4YFR034C BRF1P29056 596 aa12.7□□□□□ -0.38
PHO4YFR034C SPS19P32573 292 aaKnown RBP12.7□□□□□ -0.38
PHO4YFR034C SWE1P32944 819 aa12.7□□□□□ -0.38
PHO4YFR034C YKL100CP34248 587 aa12.7□□□□□ -0.38
PHO4YFR034C PDX3P38075 228 aaKnown RBP12.7□□□□□ -0.38
PHO4YFR034C DOT6P40059 670 aaKnown RBP12.7□□□□□ -0.38
PHO4YFR034C NOP9P47077 666 aaKnown RBP12.7□□□□□ -0.38
PHO4YFR034C NAS6P50086 228 aa12.7□□□□□ -0.38
PHO4YFR034C YNR065CP53751 1116 aa12.7□□□□□ -0.38
PHO4YFR034C EAR1Q03212 550 aa12.7□□□□□ -0.38
PHO4YFR034C PSR1Q07800 427 aa12.7□□□□□ -0.38
PHO4YFR034C UAF30Q08747 228 aa12.7□□□□□ -0.38
PHO4YFR034C MCD1Q12158 566 aa12.7□□□□□ -0.38
PHO4YFR034C YOR012WQ12351 137 aa12.7□□□□□ -0.38
PHO4YFR034C SEM1O94742 89 aa12.69□□□□□ -0.38
PHO4YFR034C YCK2P23292 546 aaKnown RBP12.69□□□□□ -0.38
PHO4YFR034C FRE2P36033 711 aa12.69□□□□□ -0.38
PHO4YFR034C CAF4P36130 643 aa12.69□□□□□ -0.38
PHO4YFR034C PCL5P38794 229 aa12.69□□□□□ -0.38
PHO4YFR034C LRP1P38801 184 aaKnown RBP12.69□□□□□ -0.38
PHO4YFR034C GCD10P41814 478 aa12.69□□□□□ -0.38
PHO4YFR034C GAT1P43574 510 aa12.69□□□□□ -0.38
PHO4YFR034C RMD8P43620 662 aa12.69□□□□□ -0.38
PHO4YFR034C MPS3P47069 682 aa12.69□□□□□ -0.38
PHO4YFR034C MTR3P48240 250 aaPredicted RBP12.69□□□□□ -0.38
PHO4YFR034C FLC3P53121 802 aa12.69□□□□□ -0.38
PHO4YFR034C MUM3Q08750 479 aa12.69□□□□□ -0.38
PHO4YFR034C SLF1Q12034 447 aaKnown RBP12.69□□□□□ -0.38
PHO4YFR034C TAF3Q12297 353 aa12.69□□□□□ -0.38
PHO4YFR034C SPT3P06844 337 aa12.68□□□□□ -0.38
PHO4YFR034C TUB1P09733 447 aaKnown RBP12.68□□□□□ -0.38
PHO4YFR034C PHO81P17442 1178 aa12.68□□□□□ -0.38
PHO4YFR034C CLB4P24871 460 aa12.68□□□□□ -0.38
PHO4YFR034C IST2P38250 946 aa12.68□□□□□ -0.38
PHO4YFR034C FTH1P38310 465 aa12.68□□□□□ -0.38
PHO4YFR034C DBP8P38719 431 aa12.68□□□□□ -0.38
PHO4YFR034C GET1P53192 235 aa12.68□□□□□ -0.38
PHO4YFR034C YMR178WQ03219 274 aaKnown RBP12.68□□□□□ -0.38
PHO4YFR034C SGF29P25554 259 aa12.67□□□□□ -0.38
PHO4YFR034C YKR078WP36158 585 aaKnown RBP12.67□□□□□ -0.38
PHO4YFR034C HSE1P38753 452 aa12.67□□□□□ -0.38
PHO4YFR034C NPT1P39683 429 aaKnown RBP12.67□□□□□ -0.38
PHO4YFR034C YER034WP40022 185 aaKnown RBP12.67□□□□□ -0.38
PHO4YFR034C GVP36P40531 326 aaKnown RBP12.67□□□□□ -0.38
PHO4YFR034C IMA5P40884 581 aa12.67□□□□□ -0.38
PHO4YFR034C DIA3P52290 468 aa12.67□□□□□ -0.38
PHO4YFR034C NAN1Q02931 896 aaKnown RBP12.67□□□□□ -0.38
PHO4YFR034C PML39Q03760 334 aa12.67□□□□□ -0.38
PHO4YFR034C YMR111CQ04461 462 aaPredicted RBP12.67□□□□□ -0.38
PHO4YFR034C BCH1Q05029 724 aa12.67□□□□□ -0.38
PHO4YFR034C RSC3Q06639 885 aa12.67□□□□□ -0.38
PHO4YFR034C PDH1Q12428 516 aaKnown RBP12.67□□□□□ -0.38
PHO4YFR034C PHO5P00635 467 aa12.66□□□□□ -0.38
PHO4YFR034C YAR066WP0CX18 203 aa12.66□□□□□ -0.38
PHO4YFR034C YHR214WP0CX19 203 aa12.66□□□□□ -0.38
PHO4YFR034C RSR1P13856 272 aa12.66□□□□□ -0.38
PHO4YFR034C SEC63P14906 663 aa12.66□□□□□ -0.38
PHO4YFR034C URA4P20051 364 aa12.66□□□□□ -0.38
PHO4YFR034C CIN8P27895 1000 aa12.66□□□□□ -0.38
PHO4YFR034C YJU3P28321 313 aa12.66□□□□□ -0.38
PHO4YFR034C STE14P32584 239 aa12.66□□□□□ -0.38
PHO4YFR034C SSN3P39073 555 aa12.66□□□□□ -0.38
PHO4YFR034C GIP4P39732 760 aa12.66□□□□□ -0.38
PHO4YFR034C EMP65P40085 556 aa12.66□□□□□ -0.38
PHO4YFR034C SEC27P41811 889 aaKnown RBP12.66□□□□□ -0.38
PHO4YFR034C STB2P46679 850 aa12.66□□□□□ -0.38
PHO4YFR034C RSM7P47150 247 aa12.66□□□□□ -0.38
PHO4YFR034C YPT32P51996 222 aaKnown RBP12.66□□□□□ -0.38
PHO4YFR034C YDR344CQ05510 147 aa12.66□□□□□ -0.38
PHO4YFR034C FLC1Q08967 793 aa12.66□□□□□ -0.38
PHO4YFR034C SMF3Q12078 473 aaPredicted RBP12.66□□□□□ -0.38
PHO4YFR034C SEC39Q12745 709 aa12.66□□□□□ -0.38
PHO4YFR034C SUC2P00724 532 aa12.65□□□□□ -0.38
PHO4YFR034C HXK2P04807 486 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms