RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W YBL029WP38201 376 aa3.34□□□□□ -1.87
LOC1YFR001W YIR014WP40570 242 aa3.34□□□□□ -1.87
LOC1YFR001W DUO1P53168 247 aaKnown RBP3.34□□□□□ -1.87
LOC1YFR001W ETT1Q08421 412 aaKnown RBP3.34□□□□□ -1.87
LOC1YFR001W BUD5P25300 642 aaPredicted RBP3.33□□□□□ -1.88
LOC1YFR001W PUP3P25451 205 aaKnown RBP3.33□□□□□ -1.88
LOC1YFR001W POL4P25615 582 aa3.33□□□□□ -1.88
LOC1YFR001W PPZ1P26570 692 aa3.33□□□□□ -1.88
LOC1YFR001W MCM4P30665 933 aaKnown RBP3.33□□□□□ -1.88
LOC1YFR001W PAH1P32567 862 aa3.33□□□□□ -1.88
LOC1YFR001W TRS65P32893 560 aa3.33□□□□□ -1.88
LOC1YFR001W PHD1P36093 366 aa3.33□□□□□ -1.88
LOC1YFR001W SPC34P36131 295 aa3.33□□□□□ -1.88
LOC1YFR001W ROT2P38138 954 aa3.33□□□□□ -1.88
LOC1YFR001W RTT107P38850 1070 aa3.33□□□□□ -1.88
LOC1YFR001W NOP16P40007 231 aaKnown RBP3.33□□□□□ -1.88
LOC1YFR001W AZF1P41696 914 aa3.33□□□□□ -1.88
LOC1YFR001W PTR3P43606 678 aa3.33□□□□□ -1.88
LOC1YFR001W FAR3P46671 204 aa3.33□□□□□ -1.88
LOC1YFR001W HOS2P53096 452 aaPredicted RBP3.33□□□□□ -1.88
LOC1YFR001W CUL3P53202 744 aa3.33□□□□□ -1.88
LOC1YFR001W YML037CQ03703 340 aa3.33□□□□□ -1.88
LOC1YFR001W YDR415CQ04033 374 aaPredicted RBP3.33□□□□□ -1.88
LOC1YFR001W TMA64Q04600 565 aaKnown RBP3.33□□□□□ -1.88
LOC1YFR001W HUA2Q12134 243 aa3.33□□□□□ -1.88
LOC1YFR001W MF(ALPHA)1P01149 165 aa3.32□□□□□ -1.88
LOC1YFR001W GLN3P18494 730 aa3.32□□□□□ -1.88
LOC1YFR001W YIH1P25637 258 aa3.32□□□□□ -1.88
LOC1YFR001W CMK1P27466 446 aaKnown RBP3.32□□□□□ -1.88
LOC1YFR001W SNC1P31109 117 aa3.32□□□□□ -1.88
LOC1YFR001W SSE2P32590 693 aaKnown RBP3.32□□□□□ -1.88
LOC1YFR001W NUP133P36161 1157 aa3.32□□□□□ -1.88
LOC1YFR001W RIM2P38127 377 aa3.32□□□□□ -1.88
LOC1YFR001W YER130CP39959 443 aa3.32□□□□□ -1.88
LOC1YFR001W MAF1P41910 395 aa3.32□□□□□ -1.88
LOC1YFR001W GUF1P46943 645 aa3.32□□□□□ -1.88
LOC1YFR001W LCL3P53153 274 aa3.32□□□□□ -1.88
LOC1YFR001W YGR127WP53275 312 aa3.32□□□□□ -1.88
LOC1YFR001W MSC1Q03104 513 aa3.32□□□□□ -1.88
LOC1YFR001W NGL3Q03210 505 aa3.32□□□□□ -1.88
LOC1YFR001W BUD22Q04347 519 aaKnown RBP3.32□□□□□ -1.88
LOC1YFR001W YMR317WQ04893 1140 aa3.32□□□□□ -1.88
LOC1YFR001W LUC7Q07508 261 aaPredicted RBP3.32□□□□□ -1.88
LOC1YFR001W NOP58Q12499 511 aaKnown RBP3.32□□□□□ -1.88
LOC1YFR001W ARP6Q12509 438 aa3.32□□□□□ -1.88
LOC1YFR001W ENT1Q12518 454 aa3.32□□□□□ -1.88
LOC1YFR001W SEM1O94742 89 aa3.31□□□□□ -1.88
LOC1YFR001W AAC3P18238 307 aa3.31□□□□□ -1.88
LOC1YFR001W SAN1P22470 610 aa3.31□□□□□ -1.88
LOC1YFR001W BOS1P25385 244 aa3.31□□□□□ -1.88
LOC1YFR001W IMG1P25626 169 aa3.31□□□□□ -1.88
LOC1YFR001W ERG1P32476 496 aaKnown RBP3.31□□□□□ -1.88
LOC1YFR001W SAC6P32599 642 aaKnown RBP3.31□□□□□ -1.88
LOC1YFR001W YBR144CP34215 104 aa3.31□□□□□ -1.88
LOC1YFR001W YBL055CP34220 418 aaPredicted RBP3.31□□□□□ -1.88
LOC1YFR001W YKL100CP34248 587 aa3.31□□□□□ -1.88
LOC1YFR001W MIC60P36112 540 aa3.31□□□□□ -1.88
LOC1YFR001W ICS2P38284 255 aa3.31□□□□□ -1.88
LOC1YFR001W LAG1P38703 411 aa3.31□□□□□ -1.88
LOC1YFR001W FLC2P39719 783 aa3.31□□□□□ -1.88
LOC1YFR001W AXL1P40851 1208 aa3.31□□□□□ -1.88
LOC1YFR001W UPF3P48412 387 aaKnown RBP3.31□□□□□ -1.88
LOC1YFR001W APT1P49435 187 aaKnown RBP3.31□□□□□ -1.88
LOC1YFR001W YVH1Q02256 364 aaKnown RBP3.31□□□□□ -1.88
LOC1YFR001W YMR160WQ03823 816 aa3.31□□□□□ -1.88
LOC1YFR001W DIC1Q06143 298 aa3.31□□□□□ -1.88
LOC1YFR001W SSK1Q07084 712 aa3.31□□□□□ -1.88
LOC1YFR001W NMD4Q12129 218 aa3.31□□□□□ -1.88
LOC1YFR001W CSR2Q12734 1121 aa3.31□□□□□ -1.88
LOC1YFR001W GFD2P25370 566 aaKnown RBP3.3□□□□□ -1.88
LOC1YFR001W RPS2P25443 254 aaKnown RBP3.3□□□□□ -1.88
LOC1YFR001W ACH1P32316 526 aa3.3□□□□□ -1.88
LOC1YFR001W CCT6P39079 546 aa3.3□□□□□ -1.88
LOC1YFR001W YJL070CP40361 888 aa3.3□□□□□ -1.88
LOC1YFR001W YGL260WP53056 76 aa3.3□□□□□ -1.88
LOC1YFR001W SMM1P53720 384 aaKnown RBP3.3□□□□□ -1.88
LOC1YFR001W TDA7P53882 636 aaPredicted RBP3.3□□□□□ -1.88
LOC1YFR001W MSS11Q03825 758 aa3.3□□□□□ -1.88
LOC1YFR001W FMP45Q07651 309 aa3.3□□□□□ -1.88
LOC1YFR001W FMP40Q08968 688 aaPredicted RBP3.3□□□□□ -1.88
LOC1YFR001W PDH1Q12428 516 aaKnown RBP3.3□□□□□ -1.88
LOC1YFR001W SEC53P07283 254 aaKnown RBP3.29□□□□□ -1.88
LOC1YFR001W RGT1P32862 1170 aa3.29□□□□□ -1.88
LOC1YFR001W TIF3P34167 436 aaKnown RBP3.29□□□□□ -1.88
LOC1YFR001W UBP11P36026 717 aa3.29□□□□□ -1.88
LOC1YFR001W RPL32P38061 130 aaKnown RBP3.29□□□□□ -1.88
LOC1YFR001W AFG3P39925 761 aa3.29□□□□□ -1.88
LOC1YFR001W TMA108P40462 946 aa3.29□□□□□ -1.88
LOC1YFR001W DIM1P41819 318 aaKnown RBP3.29□□□□□ -1.88
LOC1YFR001W YPL014WQ02606 381 aa3.29□□□□□ -1.88
LOC1YFR001W YEH1Q07804 573 aa3.29□□□□□ -1.88
LOC1YFR001W YEH2Q07950 538 aa3.29□□□□□ -1.88
LOC1YFR001W DAP1Q12091 152 aa3.29□□□□□ -1.88
LOC1YFR001W MRP13P12686 339 aa3.28□□□□□ -1.88
LOC1YFR001W PMS1P14242 873 aa3.28□□□□□ -1.88
LOC1YFR001W TYR1P20049 452 aa3.28□□□□□ -1.88
LOC1YFR001W SGV1P23293 657 aaKnown RBP3.28□□□□□ -1.88
LOC1YFR001W NOP4P37838 685 aaKnown RBP3.28□□□□□ -1.88
LOC1YFR001W YJL068CP40363 299 aa3.28□□□□□ -1.88
LOC1YFR001W SNG1P46950 547 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms