RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH4	YFL003C	SAT4	P25333	603 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	STE50	P25344	346 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	OCA4	P25366	362 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	PUP3	P25451	205 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	DPH2	P32461	534 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	TCD2	P36101	447 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	KEL1	P38853	1164 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	YMR147W	P40218	223 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	IRC24	P40580	263 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	ATP22	P50273	684 aa	Predicted RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	NNF2	P53253	936 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	DCP2	P53550	970 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	YTP1	P53584	459 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	EFM6	P53970	246 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	ADE13	Q05911	482 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	YLR455W	Q06188	304 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	YJR112W-A	Q3E743	109 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	ADE5,7	P07244	802 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	EST1	P17214	699 aa	Predicted RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	ADK2	P26364	225 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	LEU5	P38702	357 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	LNP1	P38878	278 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	HXT9	P40885	567 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	MAF1	P41910	395 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	STR3	P53101	465 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	BTN2	P53286	410 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	ASI1	P54074	624 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	COQ9	Q05779	260 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	IRC10	Q08118	586 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	RRD2	Q12461	358 aa		3.11	□□□□□ -1.91
MSH4	YFL003C	TOP2	P06786	1428 aa	Known RBP	3.11	□□□□□ -1.91
MSH4	YFL003C	APN1	P22936	367 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	TKL1	P23254	680 aa	Known RBP	3.1	□□□□□ -1.91
MSH4	YFL003C	RXT2	P38255	430 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	QRI1	P43123	477 aa	Known RBP	3.1	□□□□□ -1.91
MSH4	YFL003C	DPB11	P47027	764 aa	Predicted RBP	3.1	□□□□□ -1.91
MSH4	YFL003C	MRK1	P50873	501 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	SGF73	P53165	657 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	TCO89	Q08921	799 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	INP53	Q12271	1107 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	PEP3	P27801	918 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	SSE2	P32590	693 aa	Known RBP	3.1	□□□□□ -1.91
MSH4	YFL003C	MRE11	P32829	692 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	SEC66	P33754	206 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	NUP133	P36161	1157 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	PXL1	P36166	706 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	OPT1	P40897	799 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	YJL107C	P42947	387 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	IMD4	P50094	524 aa	Known RBP	3.1	□□□□□ -1.91
MSH4	YFL003C	PKP2	P53170	491 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	BNI5	P53890	448 aa	Known RBP	3.1	□□□□□ -1.91
MSH4	YFL003C	RMT2	Q03305	412 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	RDL1	Q12305	139 aa	Known RBP	3.1	□□□□□ -1.91
MSH4	YFL003C	ISA2	Q12425	185 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	SNT2	P53127	1403 aa		3.1	□□□□□ -1.91
MSH4	YFL003C	YMR084W	A2P2R3	262 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	PRE8	P23639	250 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	YIH1	P25637	258 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	PMT1	P33775	817 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	DIA4	P38705	446 aa	Predicted RBP	3.09	□□□□□ -1.91
MSH4	YFL003C	ANS1	P38832	159 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	BUR6	P40096	142 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	YIL166C	P40445	542 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	DOT5	P40553	215 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	UBX6	P47049	396 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	GFD1	Q04839	188 aa	Known RBP	3.09	□□□□□ -1.91
MSH4	YFL003C	PIG1	Q06216	648 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	GAL80	P04387	435 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	CLB2	P24869	491 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	ADY2	P25613	283 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	GCS1	P35197	352 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	THI2	P38141	450 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	FTH1	P38310	465 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	TSC10	P38342	320 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	UIP3	P39547	235 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	CIK1	Q01649	594 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	VPS38	Q05919	439 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	ARO10	Q06408	635 aa		3.09	□□□□□ -1.91
MSH4	YFL003C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
MSH4	YFL003C	PRD1	P25375	712 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	BUD14	P27637	709 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	URA7	P28274	579 aa	Known RBP	3.08	□□□□□ -1.92
MSH4	YFL003C	BRF1	P29056	596 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	PKP1	P40530	394 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	GPI8	P49018	411 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	FRE3	Q08905	711 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	MDL1	P33310	695 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	YBR144C	P34215	104 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	TAX4	P47030	604 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	PET130	P47065	347 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	PYK2	P52489	506 aa	Known RBP	3.08	□□□□□ -1.92
MSH4	YFL003C	OSW1	Q08692	278 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	ULS1	Q08562	1619 aa		3.08	□□□□□ -1.92
MSH4	YFL003C	MNE1	P24720	663 aa		3.07	□□□□□ -1.92
MSH4	YFL003C	GEX1	P25596	615 aa		3.07	□□□□□ -1.92
MSH4	YFL003C	MTR2	P34232	184 aa	Known RBP	3.07	□□□□□ -1.92
MSH4	YFL003C	VID24	P38263	362 aa		3.07	□□□□□ -1.92
MSH4	YFL003C	LYS20	P48570	428 aa	Known RBP	3.07	□□□□□ -1.92
MSH4	YFL003C	SMF3	Q12078	473 aa	Predicted RBP	3.07	□□□□□ -1.92
MSH4	YFL003C	PAR32	Q12515	295 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms