RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C BIK1P11709 440 aa1.06□□□□□ -2.24
UBP3YER151C COX11P19516 300 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C CBP3P21560 335 aa1.06□□□□□ -2.24
UBP3YER151C BEM1P29366 551 aa1.06□□□□□ -2.24
UBP3YER151C PHA2P32452 334 aa1.06□□□□□ -2.24
UBP3YER151C WSC4P38739 605 aa1.06□□□□□ -2.24
UBP3YER151C RRP4P38792 359 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C GPP2P40106 250 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C SKP2P42843 763 aa1.06□□□□□ -2.24
UBP3YER151C NMD5P46970 1048 aa1.06□□□□□ -2.24
UBP3YER151C YIP4P53093 235 aa1.06□□□□□ -2.24
UBP3YER151C RPN14P53196 417 aa1.06□□□□□ -2.24
UBP3YER151C YGR054WP53235 642 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C YTP1P53584 459 aa1.06□□□□□ -2.24
UBP3YER151C RPL22BP56628 122 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C CEG1Q01159 459 aaPredicted RBP1.06□□□□□ -2.24
UBP3YER151C YML037CQ03703 340 aa1.06□□□□□ -2.24
UBP3YER151C EIS1Q05050 843 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C ECM38Q05902 660 aaPredicted RBP1.06□□□□□ -2.24
UBP3YER151C TAF10Q12030 206 aa1.06□□□□□ -2.24
UBP3YER151C RTK1Q12100 620 aaPredicted RBP1.06□□□□□ -2.24
UBP3YER151C YOS9Q99220 542 aa1.06□□□□□ -2.24
UBP3YER151C AI5_ALPHAQ9ZZX1 630 aa1.06□□□□□ -2.24
UBP3YER151C RNA1P11745 407 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C TKL1P23254 680 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C MGM1P32266 881 aa1.06□□□□□ -2.24
UBP3YER151C YMR262WP38430 313 aa1.06□□□□□ -2.24
UBP3YER151C KAP123P40069 1113 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C MET18P40469 1032 aa1.06□□□□□ -2.24
UBP3YER151C PRM2P40534 656 aa1.06□□□□□ -2.24
UBP3YER151C YGR153WP48238 217 aa1.06□□□□□ -2.24
UBP3YER151C HLJ1P48353 224 aa1.06□□□□□ -2.24
UBP3YER151C YGR237CP50089 785 aa1.06□□□□□ -2.24
UBP3YER151C ALF1P53904 254 aa1.06□□□□□ -2.24
UBP3YER151C YMR210WQ03649 449 aa1.06□□□□□ -2.24
UBP3YER151C TRS23Q03784 219 aa1.06□□□□□ -2.24
UBP3YER151C COG8Q04632 607 aa1.06□□□□□ -2.24
UBP3YER151C NGL1Q08213 363 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C NEW1Q08972 1196 aaKnown RBP1.06□□□□□ -2.24
UBP3YER151C HUA2Q12134 243 aa1.06□□□□□ -2.24
UBP3YER151C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24 RIP-Chip
UBP3YER151C APM4Q99186 491 aa1.06□□□□□ -2.24
UBP3YER151C AIM44Q99299 758 aa1.06□□□□□ -2.24
UBP3YER151C COX2P00410 251 aa1.05□□□□□ -2.24
UBP3YER151C GCY1P14065 312 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
UBP3YER151C VPS3P23643 1011 aa1.05□□□□□ -2.24
UBP3YER151C PMT2P31382 759 aa1.05□□□□□ -2.24
UBP3YER151C YPT52P36018 234 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C SBE22P38814 852 aa1.05□□□□□ -2.24
UBP3YER151C GZF3P42944 551 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C IRC5P43610 853 aa1.05□□□□□ -2.24
UBP3YER151C OSW7P43611 510 aa1.05□□□□□ -2.24
UBP3YER151C MNN11P46985 422 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C MLC1P53141 149 aa1.05□□□□□ -2.24
UBP3YER151C SPC98P53540 846 aa1.05□□□□□ -2.24
UBP3YER151C YNL092WP53934 400 aa1.05□□□□□ -2.24
UBP3YER151C EFR3Q03653 782 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C YMR160WQ03823 816 aa1.05□□□□□ -2.24
UBP3YER151C YDR131CQ03899 556 aa1.05□□□□□ -2.24
UBP3YER151C YDR179W-AQ03983 463 aa1.05□□□□□ -2.24
UBP3YER151C YHM2Q04013 314 aa1.05□□□□□ -2.24
UBP3YER151C SXM1Q04175 944 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C HEL2Q05580 639 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C IPK1Q06667 281 aa1.05□□□□□ -2.24
UBP3YER151C LDB17Q12342 491 aa1.05□□□□□ -2.24
UBP3YER151C FOB1O13329 566 aa1.05□□□□□ -2.24
UBP3YER151C TPK2P06245 380 aa1.05□□□□□ -2.24
UBP3YER151C CDC16P09798 840 aa1.05□□□□□ -2.24
UBP3YER151C ALG1P16661 449 aa1.05□□□□□ -2.24
UBP3YER151C PMA2P19657 947 aa1.05□□□□□ -2.24
UBP3YER151C AAD3P25612 363 aa1.05□□□□□ -2.24
UBP3YER151C SOR1P35497 357 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C ASK1P35734 292 aa1.05□□□□□ -2.24
UBP3YER151C ECM31P38122 312 aa1.05□□□□□ -2.24
UBP3YER151C FIG1P38224 298 aa1.05□□□□□ -2.24
UBP3YER151C SPL2P38839 148 aa1.05□□□□□ -2.24
UBP3YER151C YEN1P40028 759 aa1.05□□□□□ -2.24
UBP3YER151C PIG2P40187 538 aa1.05□□□□□ -2.24
UBP3YER151C YMR144WP40214 342 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C PMT6P42934 759 aa1.05□□□□□ -2.24
UBP3YER151C BST1P43571 1029 aa1.05□□□□□ -2.24
UBP3YER151C DLD2P46681 530 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C NIT2P47016 307 aa1.05□□□□□ -2.24
UBP3YER151C COQ5P49017 307 aa1.05□□□□□ -2.24
UBP3YER151C TAF4P50105 388 aa1.05□□□□□ -2.24
UBP3YER151C BSC5P53755 489 aa1.05□□□□□ -2.24
UBP3YER151C COG6P53959 839 aa1.05□□□□□ -2.24
UBP3YER151C YLR297WQ05899 129 aa1.05□□□□□ -2.24
UBP3YER151C GGA1Q06336 557 aa1.05□□□□□ -2.24
UBP3YER151C SOR2Q07786 357 aa1.05□□□□□ -2.24
UBP3YER151C SMC5Q08204 1093 aa1.05□□□□□ -2.24
UBP3YER151C RRP40Q08285 240 aaKnown RBP1.05□□□□□ -2.24
UBP3YER151C REP2P03872 296 aa1.04□□□□□ -2.24
UBP3YER151C AQY1P0CD91 305 aa1.04□□□□□ -2.24
UBP3YER151C MRP7P12687 371 aa1.04□□□□□ -2.24
UBP3YER151C DAL82P21705 255 aa1.04□□□□□ -2.24
UBP3YER151C COT1P32798 439 aa1.04□□□□□ -2.24
UBP3YER151C BEM3P32873 1128 aa1.04□□□□□ -2.24
UBP3YER151C MRP4P32902 394 aa1.04□□□□□ -2.24
UBP3YER151C YKL102CP34249 101 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms