RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C RPC34P32910 317 aa1.36□□□□□ -2.19
SWI4YER111C YBR144CP34215 104 aa1.36□□□□□ -2.19
SWI4YER111C TCD2P36101 447 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C VRG4P40107 337 aa1.36□□□□□ -2.19
SWI4YER111C MET18P40469 1032 aa1.36□□□□□ -2.19
SWI4YER111C CCT7P42943 550 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C DPB11P47027 764 aaPredicted RBP1.36□□□□□ -2.19
SWI4YER111C YML6P51998 286 aa1.36□□□□□ -2.19
SWI4YER111C YGL117WP53133 265 aa1.36□□□□□ -2.19
SWI4YER111C YGR127WP53275 312 aa1.36□□□□□ -2.19
SWI4YER111C YNL144CP53907 740 aa1.36□□□□□ -2.19
SWI4YER111C CIK1Q01649 594 aa1.36□□□□□ -2.19
SWI4YER111C ERB1Q04660 807 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C FMP45Q07651 309 aa1.36□□□□□ -2.19
SWI4YER111C YPL191CQ08930 360 aa1.36□□□□□ -2.19
SWI4YER111C RPL7AP05737 244 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C AQY1P0CD91 305 aa1.35□□□□□ -2.19
SWI4YER111C YSP3P25036 478 aa1.35□□□□□ -2.19
SWI4YER111C ADH7P25377 361 aa1.35□□□□□ -2.19
SWI4YER111C BOS1P25385 244 aa1.35□□□□□ -2.19
SWI4YER111C PDB1P32473 366 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C EMP70P32802 667 aa1.35□□□□□ -2.19
SWI4YER111C DBP8P38719 431 aa1.35□□□□□ -2.19
SWI4YER111C ANS1P38832 159 aa1.35□□□□□ -2.19
SWI4YER111C HXT14P42833 540 aa1.35□□□□□ -2.19
SWI4YER111C ROK1P45818 564 aaPredicted RBP1.35□□□□□ -2.19
SWI4YER111C BTN2P53286 410 aa1.35□□□□□ -2.19
SWI4YER111C YNL058CP53947 316 aa1.35□□□□□ -2.19
SWI4YER111C THI3Q07471 609 aa1.35□□□□□ -2.19
SWI4YER111C CYK3Q07533 885 aa1.35□□□□□ -2.19
SWI4YER111C TEN1Q07921 160 aa1.35□□□□□ -2.19
SWI4YER111C CDC45Q08032 650 aa1.35□□□□□ -2.19
SWI4YER111C SIL1Q08199 421 aa1.35□□□□□ -2.19
SWI4YER111C VPS54Q12071 889 aa1.35□□□□□ -2.19
SWI4YER111C RPL7BQ12213 244 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C RLM1Q12224 676 aa1.35□□□□□ -2.19
SWI4YER111C INP53Q12271 1107 aa1.35□□□□□ -2.19
SWI4YER111C YER145C-AA0A023PYF4 145 aa1.35□□□□□ -2.19
SWI4YER111C STF1P01098 86 aa1.35□□□□□ -2.19
SWI4YER111C PET111P08468 800 aa1.35□□□□□ -2.19
SWI4YER111C ART10P18634 518 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C CLB1P24868 471 aa1.35□□□□□ -2.19
SWI4YER111C STE50P25344 346 aa1.35□□□□□ -2.19
SWI4YER111C SSE2P32590 693 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C CMC1P36064 111 aa1.35□□□□□ -2.19
SWI4YER111C STV1P37296 890 aa1.35□□□□□ -2.19
SWI4YER111C AAP1P37898 856 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C RPL32P38061 130 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C DIA4P38705 446 aaPredicted RBP1.35□□□□□ -2.19
SWI4YER111C MUP3P38734 546 aa1.35□□□□□ -2.19
SWI4YER111C ECM10P39987 644 aa1.35□□□□□ -2.19
SWI4YER111C LSM5P40089 93 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C LTP1P40347 161 aa1.35□□□□□ -2.19
SWI4YER111C STU2P46675 888 aa1.35□□□□□ -2.19
SWI4YER111C TWF1P53250 332 aa1.35□□□□□ -2.19
SWI4YER111C YPR003CP53394 754 aa1.35□□□□□ -2.19
SWI4YER111C BNI5P53890 448 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C RSM23Q01163 450 aa1.35□□□□□ -2.19
SWI4YER111C OAZ1Q02803 292 aa1.35□□□□□ -2.19
SWI4YER111C PDS5Q04264 1277 aa1.35□□□□□ -2.19
SWI4YER111C HRD3Q05787 833 aa1.35□□□□□ -2.19
SWI4YER111C PDR8Q06149 701 aa1.35□□□□□ -2.19
SWI4YER111C ULA1Q12059 462 aa1.35□□□□□ -2.19
SWI4YER111C CTF3Q12748 733 aa1.35□□□□□ -2.19
SWI4YER111C GLT1Q12680 2145 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C YMR084WA2P2R3 262 aa1.35□□□□□ -2.19
SWI4YER111C RAP1P11938 827 aa1.35□□□□□ -2.19
SWI4YER111C NAT1P12945 854 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C KGD1P20967 1014 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C UGP1P32861 499 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C HCS1P34243 683 aa1.35□□□□□ -2.19
SWI4YER111C GEX2P36173 615 aa1.35□□□□□ -2.19
SWI4YER111C ROT2P38138 954 aa1.35□□□□□ -2.19
SWI4YER111C RXT2P38255 430 aa1.35□□□□□ -2.19
SWI4YER111C LRP1P38801 184 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C YNG2P38806 282 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C FAR3P46671 204 aa1.35□□□□□ -2.19
SWI4YER111C CUL3P53202 744 aa1.35□□□□□ -2.19
SWI4YER111C APM1Q00776 475 aaPredicted RBP1.35□□□□□ -2.19
SWI4YER111C MEH1Q02205 184 aa1.35□□□□□ -2.19
SWI4YER111C GIS1Q03833 894 aa1.35□□□□□ -2.19
SWI4YER111C ROY1Q04847 553 aa1.35□□□□□ -2.19
SWI4YER111C YDL057WQ07379 328 aa1.35□□□□□ -2.19
SWI4YER111C CFT2Q12102 859 aaPredicted RBP1.35□□□□□ -2.19
SWI4YER111C PDH1Q12428 516 aaKnown RBP1.35□□□□□ -2.19
SWI4YER111C GRX6Q12438 231 aa1.35□□□□□ -2.19
SWI4YER111C MMS1Q06211 1407 aa1.34□□□□□ -2.19
SWI4YER111C ILS1P09436 1072 aaKnown RBP1.34□□□□□ -2.19
SWI4YER111C KGD2P19262 463 aaPredicted RBP1.34□□□□□ -2.19
SWI4YER111C IDH2P28241 369 aaKnown RBP1.34□□□□□ -2.19
SWI4YER111C SYN8P31377 255 aa1.34□□□□□ -2.19
SWI4YER111C YMC1P32331 307 aa1.34□□□□□ -2.19
SWI4YER111C ELM1P32801 640 aa1.34□□□□□ -2.19
SWI4YER111C PPZ2P33329 710 aa1.34□□□□□ -2.19
SWI4YER111C TIF3P34167 436 aaKnown RBP1.34□□□□□ -2.19
SWI4YER111C MSR1P38714 643 aa1.34□□□□□ -2.19
SWI4YER111C APE4P38821 490 aa1.34□□□□□ -2.19
SWI4YER111C CAJ1P39101 391 aa1.34□□□□□ -2.19
SWI4YER111C ELO1P39540 310 aa1.34□□□□□ -2.19
SWI4YER111C SDS3P40505 327 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms