RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	SEC3	P33332	1336 aa	Known RBP	3.61	□□□□□ -1.83
PMI40	YER003C	CHO1	P08456	276 aa		3.6	□□□□□ -1.83
PMI40	YER003C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.6	□□□□□ -1.83	not detected
PMI40	YER003C	BUD5	P25300	642 aa	Predicted RBP	3.6	□□□□□ -1.83
PMI40	YER003C	ILV6	P25605	309 aa	Known RBP	3.6	□□□□□ -1.83
PMI40	YER003C	SAC1	P32368	623 aa	Known RBP	3.6	□□□□□ -1.83
PMI40	YER003C	RXT2	P38255	430 aa		3.6	□□□□□ -1.83
PMI40	YER003C	FTH1	P38310	465 aa		3.6	□□□□□ -1.83
PMI40	YER003C	MSR1	P38714	643 aa		3.6	□□□□□ -1.83
PMI40	YER003C	PAC2	P39937	518 aa		3.6	□□□□□ -1.83
PMI40	YER003C	GDI1	P39958	451 aa	Known RBP	3.6	□□□□□ -1.83
PMI40	YER003C	ZIM17	P42844	174 aa		3.6	□□□□□ -1.83
PMI40	YER003C	STB2	P46679	850 aa		3.6	□□□□□ -1.83
PMI40	YER003C	YJL043W	P47053	257 aa		3.6	□□□□□ -1.83
PMI40	YER003C	YGR016W	P53209	190 aa		3.6	□□□□□ -1.83
PMI40	YER003C	OAZ1	Q02803	292 aa		3.6	□□□□□ -1.83
PMI40	YER003C	KAP120	Q02932	1032 aa		3.6	□□□□□ -1.83
PMI40	YER003C	ARX1	Q03862	593 aa	Known RBP	3.6	□□□□□ -1.83
PMI40	YER003C	SOV1	Q04748	898 aa		3.6	□□□□□ -1.83
PMI40	YER003C	ROY1	Q04847	553 aa		3.6	□□□□□ -1.83
PMI40	YER003C	TEN1	Q07921	160 aa		3.6	□□□□□ -1.83
PMI40	YER003C	YOL159C	Q08300	171 aa		3.6	□□□□□ -1.83
PMI40	YER003C	YOR389W	Q08912	624 aa		3.6	□□□□□ -1.83
PMI40	YER003C	YLR049C	Q12110	428 aa		3.6	□□□□□ -1.83
PMI40	YER003C	RDL1	Q12305	139 aa	Known RBP	3.6	□□□□□ -1.83
PMI40	YER003C	PDH1	Q12428	516 aa	Known RBP	3.6	□□□□□ -1.83
PMI40	YER003C	PAR32	Q12515	295 aa	Known RBP	3.6	□□□□□ -1.83
PMI40	YER003C	YDL007C-A	Q2V2Q0	85 aa		3.6	□□□□□ -1.83
PMI40	YER003C	SGS1	P35187	1447 aa		3.6	□□□□□ -1.83
PMI40	YER003C	RAP1	P11938	827 aa		3.59	□□□□□ -1.83
PMI40	YER003C	NAT1	P12945	854 aa	Known RBP	3.59	□□□□□ -1.83
PMI40	YER003C	TKL1	P23254	680 aa	Known RBP	3.59	□□□□□ -1.83
PMI40	YER003C	SNT1	P25357	1226 aa		3.59	□□□□□ -1.83
PMI40	YER003C	MSS51	P32335	436 aa		3.59	□□□□□ -1.83
PMI40	YER003C	ANP1	P32629	500 aa		3.59	□□□□□ -1.83
PMI40	YER003C	YME1	P32795	747 aa		3.59	□□□□□ -1.83
PMI40	YER003C	HCS1	P34243	683 aa		3.59	□□□□□ -1.83
PMI40	YER003C	YKL100C	P34248	587 aa		3.59	□□□□□ -1.83
PMI40	YER003C	APD1	P38281	316 aa		3.59	□□□□□ -1.83
PMI40	YER003C	DBP8	P38719	431 aa		3.59	□□□□□ -1.83
PMI40	YER003C	CIN4	P39110	191 aa		3.59	□□□□□ -1.83
PMI40	YER003C	VMA13	P41807	478 aa	Known RBP	3.59	□□□□□ -1.83
PMI40	YER003C	TCB2	P48231	1178 aa		3.59	□□□□□ -1.83
PMI40	YER003C	ORC5	P50874	479 aa		3.59	□□□□□ -1.83
PMI40	YER003C	PFA5	Q03289	374 aa		3.59	□□□□□ -1.83
PMI40	YER003C	EMI2	Q04409	500 aa	Known RBP	3.59	□□□□□ -1.83
PMI40	YER003C	RBS1	Q05672	457 aa	Known RBP	3.59	□□□□□ -1.83
PMI40	YER003C	CDC45	Q08032	650 aa		3.59	□□□□□ -1.83
PMI40	YER003C	AFI1	Q99222	893 aa		3.59	□□□□□ -1.83
PMI40	YER003C	ARG81	P05085	880 aa		3.58	□□□□□ -1.84
PMI40	YER003C	TPM1	P17536	199 aa	Known RBP	3.58	□□□□□ -1.84
PMI40	YER003C	CLB2	P24869	491 aa		3.58	□□□□□ -1.84
PMI40	YER003C	ERV1	P27882	189 aa		3.58	□□□□□ -1.84
PMI40	YER003C	PUP2	P32379	260 aa		3.58	□□□□□ -1.84
PMI40	YER003C	HXT3	P32466	567 aa	Known RBP	3.58	□□□□□ -1.84
PMI40	YER003C	TFB1	P32776	642 aa		3.58	□□□□□ -1.84
PMI40	YER003C	RPS0A	P32905	252 aa	Known RBP	3.58	□□□□□ -1.84
PMI40	YER003C	RPL32	P38061	130 aa	Known RBP	3.58	□□□□□ -1.84
PMI40	YER003C	IMD2	P38697	523 aa	Known RBP	3.58	□□□□□ -1.84
PMI40	YER003C	ERV46	P39727	415 aa		3.58	□□□□□ -1.84
PMI40	YER003C	SEC28	P40509	296 aa	Known RBP	3.58	□□□□□ -1.84
PMI40	YER003C	CIN1	P40987	1014 aa		3.58	□□□□□ -1.84
PMI40	YER003C	YJL107C	P42947	387 aa		3.58	□□□□□ -1.84
PMI40	YER003C	CAK1	P43568	368 aa	Predicted RBP	3.58	□□□□□ -1.84
PMI40	YER003C	IMD3	P50095	523 aa	Known RBP	3.58	□□□□□ -1.84
PMI40	YER003C	MNP1	P53163	194 aa	Predicted RBP	3.58	□□□□□ -1.84
PMI40	YER003C	MSC1	Q03104	513 aa		3.58	□□□□□ -1.84
PMI40	YER003C	PDS5	Q04264	1277 aa		3.58	□□□□□ -1.84
PMI40	YER003C	TAP42	Q04372	366 aa		3.58	□□□□□ -1.84
PMI40	YER003C	DON1	Q05610	365 aa		3.58	□□□□□ -1.84
PMI40	YER003C	FMP45	Q07651	309 aa		3.58	□□□□□ -1.84
PMI40	YER003C	SUT2	Q12286	268 aa		3.58	□□□□□ -1.84
PMI40	YER003C	SPT7	P35177	1332 aa		3.58	□□□□□ -1.84
PMI40	YER003C	RPL31B	P0C2H9	113 aa	Known RBP	3.57	□□□□□ -1.84
PMI40	YER003C	RPL3	P14126	387 aa	Known RBP	3.57	□□□□□ -1.84
PMI40	YER003C	YCR006C	P25350	157 aa		3.57	□□□□□ -1.84
PMI40	YER003C	KRR1	P25586	316 aa	Predicted RBP	3.57	□□□□□ -1.84
PMI40	YER003C	ADY2	P25613	283 aa		3.57	□□□□□ -1.84
PMI40	YER003C	IDH2	P28241	369 aa	Known RBP	3.57	□□□□□ -1.84
PMI40	YER003C	RML2	P32611	393 aa		3.57	□□□□□ -1.84
PMI40	YER003C	YME2	P32843	850 aa		3.57	□□□□□ -1.84
PMI40	YER003C	PPZ2	P33329	710 aa		3.57	□□□□□ -1.84
PMI40	YER003C	NIP100	P33420	868 aa		3.57	□□□□□ -1.84
PMI40	YER003C	OCT1	P35999	772 aa		3.57	□□□□□ -1.84
PMI40	YER003C	MIA40	P36046	403 aa		3.57	□□□□□ -1.84
PMI40	YER003C	ARN1	P38731	627 aa		3.57	□□□□□ -1.84
PMI40	YER003C	LCB2	P40970	561 aa		3.57	□□□□□ -1.84
PMI40	YER003C	YJL055W	P47044	245 aa		3.57	□□□□□ -1.84
PMI40	YER003C	TOF2	Q02208	771 aa		3.57	□□□□□ -1.84
PMI40	YER003C	PEX25	Q02969	394 aa		3.57	□□□□□ -1.84
PMI40	YER003C	YML122C	Q03207	126 aa		3.57	□□□□□ -1.84
PMI40	YER003C	GYL1	Q04322	720 aa		3.57	□□□□□ -1.84
PMI40	YER003C	PDR8	Q06149	701 aa		3.57	□□□□□ -1.84
PMI40	YER003C	PIG1	Q06216	648 aa		3.57	□□□□□ -1.84
PMI40	YER003C	BSP1	Q06604	576 aa		3.57	□□□□□ -1.84
PMI40	YER003C	MCH4	Q08268	501 aa		3.57	□□□□□ -1.84
PMI40	YER003C	SLK19	Q08581	821 aa	Known RBP	3.57	□□□□□ -1.84
PMI40	YER003C	YML133C	Q03099	1374 aa		3.56	□□□□□ -1.84
PMI40	YER003C	YLL067C	Q07888	1374 aa		3.56	□□□□□ -1.84
PMI40	YER003C	YLL066C	Q99208	1374 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms