RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	IWR1	Q07532	353 aa	Predicted RBP	4.4	□□□□□ -1.71
UBC8	YEL012W	TLG2	Q08144	397 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	AIM39	Q08223	395 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	YKL033W-A	Q86ZR7	236 aa		4.4	□□□□□ -1.71
UBC8	YEL012W	SEC63	P14906	663 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	THR1	P17423	357 aa	Known RBP	4.39	□□□□□ -1.71
UBC8	YEL012W	APM3	P38153	483 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	ATG12	P38316	186 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	YLF2	P38746	405 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	TMN3	P40071	706 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	LRO1	P40345	661 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	UFE1	P41834	346 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	CPR7	P47103	393 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	TDA7	P53882	636 aa	Predicted RBP	4.39	□□□□□ -1.71
UBC8	YEL012W	ARR3	Q06598	404 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	IZH3	Q07959	543 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	YOL073C	Q08232	322 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	MCH5	Q08777	521 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	LCB4	Q12246	624 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	GIS3	Q12418	502 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	CSF1	Q12150	2958 aa		4.39	□□□□□ -1.71
UBC8	YEL012W	TRA1	P38811	3744 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	YBR056W-A	I2HB52	66 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	PHO81	P17442	1178 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	SEC15	P22224	910 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	PSO2	P30620	661 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	CSE1	P33307	960 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	PTH2	P34222	208 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	KDX1	P36005	433 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	SET3	P36124	751 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	LEU5	P38702	357 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	REV7	P38927	245 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	TIF34	P40217	347 aa	Known RBP	4.38	□□□□□ -1.71
UBC8	YEL012W	KHA1	P40309	873 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	SAP185	P40856	1058 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	TEL2	P53038	688 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	YGR054W	P53235	642 aa	Known RBP	4.38	□□□□□ -1.71
UBC8	YEL012W	CPR6	P53691	371 aa	Known RBP	4.38	□□□□□ -1.71
UBC8	YEL012W	TRM112	P53738	135 aa	Predicted RBP	4.38	□□□□□ -1.71
UBC8	YEL012W	AQR1	P53943	586 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	ACS1	Q01574	713 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	YPL014W	Q02606	381 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	SPG3	Q04398	127 aa	Predicted RBP	4.38	□□□□□ -1.71
UBC8	YEL012W	NDD1	Q08887	554 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	MED1	Q12321	566 aa		4.38	□□□□□ -1.71
UBC8	YEL012W	ARF2	P19146	181 aa	Known RBP	4.37	□□□□□ -1.71
UBC8	YEL012W	MSH1	P25846	959 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	BMH1	P29311	267 aa	Known RBP	4.37	□□□□□ -1.71
UBC8	YEL012W	MRS6	P32864	603 aa	Known RBP	4.37	□□□□□ -1.71
UBC8	YEL012W	YKL023W	P36103	277 aa	Known RBP	4.37	□□□□□ -1.71
UBC8	YEL012W	CTP1	P38152	299 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	ECM13	P38195	257 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	PFS1	P38872	237 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	UBP7	P40453	1071 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	SER33	P40510	469 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	SUN4	P53616	420 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	ARC35	P53731	342 aa	Known RBP	4.37	□□□□□ -1.71
UBC8	YEL012W	PPM1	Q04081	328 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	RTN1	Q04947	295 aa	Known RBP	4.37	□□□□□ -1.71
UBC8	YEL012W	AIM41	Q12032	185 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	VPS54	Q12071	889 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	HOS1	Q12214	470 aa		4.37	□□□□□ -1.71
UBC8	YEL012W	GFA1	P14742	717 aa	Known RBP	4.36	□□□□□ -1.71
UBC8	YEL012W	NCP1	P16603	691 aa	Known RBP	4.36	□□□□□ -1.71
UBC8	YEL012W	UBS1	P38290	277 aa		4.36	□□□□□ -1.71
UBC8	YEL012W	YHR097C	P38809	366 aa	Known RBP	4.36	□□□□□ -1.71
UBC8	YEL012W	CHS7	P38843	316 aa		4.36	□□□□□ -1.71
UBC8	YEL012W	LTP1	P40347	161 aa		4.36	□□□□□ -1.71
UBC8	YEL012W	YJR061W	P40355	935 aa		4.36	□□□□□ -1.71
UBC8	YEL012W	PYK2	P52489	506 aa	Known RBP	4.36	□□□□□ -1.71
UBC8	YEL012W	YGL036W	P53185	909 aa	Predicted RBP	4.36	□□□□□ -1.71
UBC8	YEL012W	SNF12	P53628	566 aa		4.36	□□□□□ -1.71
UBC8	YEL012W	RPA49	Q01080	415 aa	Predicted RBP	4.36	□□□□□ -1.71
UBC8	YEL012W	AAD4	Q07747	329 aa		4.36	□□□□□ -1.71
UBC8	YEL012W	RLP24	Q07915	199 aa	Known RBP	4.36	□□□□□ -1.71
UBC8	YEL012W	SIL1	Q08199	421 aa		4.36	□□□□□ -1.71
UBC8	YEL012W	VPS33	P20795	691 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	YBR138C	P38277	524 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	YEL075C	P39972	122 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	RSM25	P40496	264 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	FLC3	P53121	802 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	YAP1802	P53309	568 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	YMR206W	Q03695	313 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	ENT2	Q05785	613 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	USV1	Q12132	391 aa		4.35	□□□□□ -1.71
UBC8	YEL012W	PHO5	P00635	467 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	RPL1A	P0CX43	217 aa	Known RBP	4.34	□□□□□ -1.71
UBC8	YEL012W	RPL1B	P0CX44	217 aa	Known RBP	4.34	□□□□□ -1.71
UBC8	YEL012W	DAL2	P25335	343 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	DPB3	P27344	201 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	SAC6	P32599	642 aa	Known RBP	4.34	□□□□□ -1.71
UBC8	YEL012W	SGE1	P33335	543 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	CBR1	P38626	284 aa	Known RBP	4.34	□□□□□ -1.71
UBC8	YEL012W	URA8	P38627	578 aa	Predicted RBP	4.34	□□□□□ -1.71
UBC8	YEL012W	YJL193W	P39542	402 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	PUG1	P40100	303 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	COQ5	P49017	307 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	GTR1	Q00582	310 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	YML131W	Q03102	365 aa		4.34	□□□□□ -1.71
UBC8	YEL012W	TRS31	Q03337	283 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms