RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	LCB2	P40970	561 aa		7.32	□□□□□ -1.24
URH1	YDR400W	MEP3	P53390	489 aa		7.32	□□□□□ -1.24
URH1	YDR400W	RRB1	Q04225	511 aa	Known RBP	7.32	□□□□□ -1.24
URH1	YDR400W	SOV1	Q04748	898 aa		7.32	□□□□□ -1.24
URH1	YDR400W	YML053C	Q04978	212 aa		7.32	□□□□□ -1.24
URH1	YDR400W	RPL7B	Q12213	244 aa	Known RBP	7.32	□□□□□ -1.24
URH1	YDR400W	YBR255C-A	Q3E776	120 aa		7.32	□□□□□ -1.24
URH1	YDR400W	YKL068W-A	Q3E826	78 aa		7.32	□□□□□ -1.24
URH1	YDR400W	PGK1	P00560	416 aa	Known RBP	7.31	□□□□□ -1.24
URH1	YDR400W	SAM1	P10659	382 aa	Known RBP	7.31	□□□□□ -1.24
URH1	YDR400W	PMA2	P19657	947 aa		7.31	□□□□□ -1.24
URH1	YDR400W	RPO26	P20435	155 aa		7.31	□□□□□ -1.24
URH1	YDR400W	RPA135	P22138	1203 aa	Known RBP	7.31	□□□□□ -1.24
URH1	YDR400W	RER1	P25560	188 aa		7.31	□□□□□ -1.24
URH1	YDR400W	UGP1	P32861	499 aa	Known RBP	7.31	□□□□□ -1.24
URH1	YDR400W	TEF4	P36008	412 aa	Known RBP	7.31	□□□□□ -1.24
URH1	YDR400W	CCT4	P39078	528 aa	Known RBP	7.31	□□□□□ -1.24
URH1	YDR400W	YIL166C	P40445	542 aa		7.31	□□□□□ -1.24
URH1	YDR400W	IMO32	P53219	342 aa		7.31	□□□□□ -1.24
URH1	YDR400W	BTN2	P53286	410 aa		7.31	□□□□□ -1.24
URH1	YDR400W	MTG1	Q03151	367 aa	Predicted RBP	7.31	□□□□□ -1.24
URH1	YDR400W	OPY2	Q06810	360 aa		7.31	□□□□□ -1.24
URH1	YDR400W	TY1B-A	O13527	1196 aa	Known RBP	7.3	□□□□□ -1.24
URH1	YDR400W	ATP2	P00830	511 aa	Known RBP	7.3	□□□□□ -1.24
URH1	YDR400W	ERG11	P10614	530 aa		7.3	□□□□□ -1.24
URH1	YDR400W	AAD3	P25612	363 aa		7.3	□□□□□ -1.24
URH1	YDR400W	PAP1	P29468	568 aa	Known RBP	7.3	□□□□□ -1.24
URH1	YDR400W	MCR1	P36060	302 aa	Known RBP	7.3	□□□□□ -1.24
URH1	YDR400W	BYE1	P36106	594 aa		7.3	□□□□□ -1.24
URH1	YDR400W	YER010C	P40011	234 aa		7.3	□□□□□ -1.24
URH1	YDR400W	YGR079W	P53249	370 aa		7.3	□□□□□ -1.24
URH1	YDR400W	TOF1	P53840	1238 aa		7.3	□□□□□ -1.24
URH1	YDR400W	RAD33	Q04231	177 aa		7.3	□□□□□ -1.24
URH1	YDR400W	YMR018W	Q04364	514 aa		7.3	□□□□□ -1.24
URH1	YDR400W	YLR297W	Q05899	129 aa		7.3	□□□□□ -1.24
URH1	YDR400W	ULA1	Q12059	462 aa		7.3	□□□□□ -1.24
URH1	YDR400W	LCB4	Q12246	624 aa		7.3	□□□□□ -1.24
URH1	YDR400W	RPN13	O13563	156 aa		7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-LR1	P0C2J4	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-F	P0CX61	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-GR2	P0CX62	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	KGD2	P19262	463 aa	Predicted RBP	7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-C	P25383	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	OCT1	P35999	772 aa		7.29	□□□□□ -1.24
URH1	YDR400W	MUD2	P36084	527 aa	Known RBP	7.29	□□□□□ -1.24
URH1	YDR400W	YGL039W	P53183	348 aa	Known RBP	7.29	□□□□□ -1.24
URH1	YDR400W	COG2	P53271	262 aa		7.29	□□□□□ -1.24
URH1	YDR400W	CSL4	P53859	292 aa	Predicted RBP	7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-DR2	Q03483	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	YPR078C	Q06813	372 aa		7.29	□□□□□ -1.24
URH1	YDR400W	NOP6	Q07623	225 aa	Known RBP	7.29	□□□□□ -1.24
URH1	YDR400W	RLP24	Q07915	199 aa	Known RBP	7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-B	Q12260	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	PRS5	Q12265	496 aa	Known RBP	7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-OR2	Q12293	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-DR1	Q12392	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-OR1	Q12439	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	AHA1	Q12449	350 aa	Known RBP	7.29	□□□□□ -1.24
URH1	YDR400W	TY2A-DR3	Q99303	438 aa		7.29	□□□□□ -1.24
URH1	YDR400W	TCP1	P12612	559 aa	Known RBP	7.28	□□□□□ -1.24
URH1	YDR400W	GCG1	P32656	232 aa	Known RBP	7.28	□□□□□ -1.24
URH1	YDR400W	YSC83	P32792	385 aa		7.28	□□□□□ -1.24
URH1	YDR400W	CNS1	P33313	385 aa		7.28	□□□□□ -1.24
URH1	YDR400W	SHP1	P34223	423 aa		7.28	□□□□□ -1.24
URH1	YDR400W	UBP13	P38187	747 aa		7.28	□□□□□ -1.24
URH1	YDR400W	YMR124W	P39523	943 aa	Known RBP	7.28	□□□□□ -1.24
URH1	YDR400W	LAS21	P40367	830 aa		7.28	□□□□□ -1.24
URH1	YDR400W	ESBP6	P53918	673 aa		7.28	□□□□□ -1.24
URH1	YDR400W	NCS2	P53923	493 aa	Predicted RBP	7.28	□□□□□ -1.24
URH1	YDR400W	VPS72	Q03388	795 aa		7.28	□□□□□ -1.24
URH1	YDR400W	GIR2	Q03768	265 aa	Predicted RBP	7.28	□□□□□ -1.24
URH1	YDR400W	MRI1	Q06489	411 aa	Known RBP	7.28	□□□□□ -1.24
URH1	YDR400W	ATG23	Q06671	453 aa		7.28	□□□□□ -1.24
URH1	YDR400W	SIP1	P32578	815 aa		7.27	□□□□□ -1.25
URH1	YDR400W	UTR4	P32626	227 aa		7.27	□□□□□ -1.25
URH1	YDR400W	NIP100	P33420	868 aa		7.27	□□□□□ -1.25
URH1	YDR400W	NUP120	P35729	1037 aa		7.27	□□□□□ -1.25
URH1	YDR400W	YKL023W	P36103	277 aa	Known RBP	7.27	□□□□□ -1.25
URH1	YDR400W	ERC1	P38767	581 aa		7.27	□□□□□ -1.25
URH1	YDR400W	SAP1	P39955	897 aa	Known RBP	7.27	□□□□□ -1.25
URH1	YDR400W	SMC3	P47037	1230 aa		7.27	□□□□□ -1.25
URH1	YDR400W	MRK1	P50873	501 aa		7.27	□□□□□ -1.25
URH1	YDR400W	APM1	Q00776	475 aa	Predicted RBP	7.27	□□□□□ -1.25
URH1	YDR400W	VTC3	Q02725	835 aa		7.27	□□□□□ -1.25
URH1	YDR400W	DIG1	Q03063	452 aa	Known RBP	7.27	□□□□□ -1.25
URH1	YDR400W	SNO4	Q04902	237 aa		7.27	□□□□□ -1.25
URH1	YDR400W	GTB1	Q04924	702 aa		7.27	□□□□□ -1.25
URH1	YDR400W	HSP33	Q08914	237 aa	Known RBP	7.27	□□□□□ -1.25
URH1	YDR400W	HSP32	Q08992	237 aa		7.27	□□□□□ -1.25
URH1	YDR400W	ADE5,7	P07244	802 aa	Known RBP	7.26	□□□□□ -1.25
URH1	YDR400W	RPF2	P36160	344 aa	Known RBP	7.26	□□□□□ -1.25
URH1	YDR400W	GEX2	P36173	615 aa		7.26	□□□□□ -1.25
URH1	YDR400W	JNM1	P36224	373 aa		7.26	□□□□□ -1.25
URH1	YDR400W	DPH1	P40487	425 aa	Known RBP	7.26	□□□□□ -1.25
URH1	YDR400W	CTK3	P46963	296 aa	Predicted RBP	7.26	□□□□□ -1.25
URH1	YDR400W	ZPR1	P53303	486 aa	Known RBP	7.26	□□□□□ -1.25
URH1	YDR400W	REG1	Q00816	1014 aa		7.26	□□□□□ -1.25
URH1	YDR400W	GYL1	Q04322	720 aa		7.26	□□□□□ -1.25
URH1	YDR400W	VTI1	Q04338	217 aa		7.26	□□□□□ -1.25
URH1	YDR400W	DON1	Q05610	365 aa		7.26	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms